BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP002094	= 518215	104 (1.040)	9 (0.090) +TA	7/192	11.4	7.4%	intergenic (+2/‑9)	LLNZ_t13313/LLNZ_t13315	tRNA‑Phe/tRNA‑Gly
*	?	CP002094	= 2500912	127 (1.270)	9 (0.090) +TA	7/192	11.4	7.4%	intergenic (‑1/+35)	LLNZ_t13375/LLNZ_t13377	tRNA‑Tyr/tRNA‑Val
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 104 total aligned reads displayed.

AATCCAGCAAGATCCATATCTTTGGCTCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCATCCGCTTAGTTTTCATTTGAAAACA  >  CP002094/518118‑518313

aaTCCAGCAAGATCCATATCTTTGGCTCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTc                                                                                                    <  2:541132/99‑1 (MQ=255)

aaTCCAGCAAGATCCATATCTTTGGCTCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTc                                                                                                    <  2:426673/99‑1 (MQ=255)

  tCCAGCAAGATCCATATCTTTGGCTCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTCt‑t                                                                                                 <  2:1313168/99‑1 (MQ=255)

    cAGCAAGATACATATCTTTGGCTCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTg                                                                                               <  2:361644/99‑1 (MQ=255)

     aGCAAGATCCATATCTTTGGCTCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGt                                                                                              <  1:476893/99‑1 (MQ=255)

     aGCAAGATCCATATCTTTGGCTCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGt                                                                                              <  1:586439/99‑1 (MQ=255)

      gCAAGATCCATATCTTTGGCTCGGGAGCTCCGTTGGTAGAGCAATGGGTTGAAGCTCCATGTGTCCGCGGTTTGATTCCGTCCCCC‑GCCAGTCt‑ttttt                                                                                             >  2:921240/1‑99 (MQ=17)

            tCCATATCTTTGGCTCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGa                                                                                       <  1:1608358/99‑1 (MQ=255)

            tCCATATCTTTGGCTCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGa                                                                                       <  2:396487/99‑1 (MQ=255)

                tatCTTTGGCTCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTa                                                                                   >  2:436097/1‑99 (MQ=255)

                tatCTTTGGCTCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTa                                                                                   <  2:1170124/99‑1 (MQ=255)

                 atCTTTGGCTCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAg                                                                                  <  1:798183/99‑1 (MQ=255)

                  tCTTTGGCTCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGt                                                                                 <  1:401102/99‑1 (MQ=255)

                    tttGGCTCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGttt                                                                               <  1:693044/99‑1 (MQ=255)

                    tttGGCTCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGttt                                                                               >  2:1618527/1‑99 (MQ=255)

                      tGGCTCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTaa                                                                             <  2:543657/99‑1 (MQ=255)

                      tGGCTCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTaa                                                                             <  1:140419/99‑1 (MQ=255)

                         cTCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATgg                                                                          <  2:879712/99‑1 (MQ=255)

                          tCGGTAGCTCAGTTTGTAGAAAAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGt                                                                         <  2:834452/99‑1 (MQ=255)

                          tCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGt                                                                         >  2:508218/1‑99 (MQ=255)

                           cGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTa                                                                        <  2:329024/99‑1 (MQ=255)

                            ggTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTTGATTCCGTCTCGC‑GCCCTTCT‑TTTTTTGCGGGTGGTGTTTTATTGTAg                                                                       >  1:1003431/1‑99 (MQ=11)

                            ggTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAg                                                                       <  1:663545/99‑1 (MQ=255)

                            ggTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAg                                                                       <  1:1225840/99‑1 (MQ=255)

                             gTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCACTCT‑TTGTTAGCGGGTGTAGTTTATTGGgaga                                                                      >  1:341823/1‑99 (MQ=14)

                              tAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGaa                                                                     <  1:1122066/99‑1 (MQ=255)

                                gCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAAcc                                                                   <  2:79620/99‑1 (MQ=255)

                                gCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAAcc                                                                   <  2:1427598/99‑1 (MQ=255)

                                 cTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAAccc                                                                  <  2:1456736/99‑1 (MQ=255)

                                 cTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAAccc                                                                  >  2:831709/1‑99 (MQ=255)

                                 cTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGATAGAAccc                                                                  >  2:1513068/1‑99 (MQ=255)

                                  tCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAAcccc                                                                 <  1:379349/99‑1 (MQ=255)

                                  tCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAAcccc                                                                 <  2:1158071/99‑1 (MQ=255)

                                  tCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAAcccc                                                                 <  2:421344/99‑1 (MQ=255)

                                     gTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGTCGGTTCGATTCCGTCTCGC‑GCCCTTCT‑TTGTTTGCGGGTGTTGTTTTATGGTGGAACCCCAGc                                                              >  1:273284/1‑99 (MQ=14)

                                     gTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGc                                                              <  2:1493221/99‑1 (MQ=255)

                                      ttGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTTCGTTTCCCGGCCATCTT‑TTTTTACGGGGGGGGGTTTAATGGGGGAACCCCacc                                                              >  1:1598621/1‑97 (MQ=0)

                                      ttGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGcc                                                             <  2:818019/99‑1 (MQ=255)

                                       tGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGCTGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCt                                                            <  1:311045/99‑1 (MQ=255)

                                        ggTAGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGG‑GCCATTCT‑TTGGTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCtt                                                           >  2:1566634/1‑99 (MQ=255)

                                        ggTAGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCtt                                                           <  1:1142715/99‑1 (MQ=255)

                                        ggTAGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCtt                                                           <  1:65411/99‑1 (MQ=255)

                                        ggTAGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCtt                                                           >  2:799327/1‑99 (MQ=255)

                                         gTAGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCTTc                                                          <  1:1583764/99‑1 (MQ=255)

                                          tAGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAAACCCCGCCTTcc                                                         >  1:358384/1‑99 (MQ=255)

                                          tAGAGCAATGGATTGAAGCTCCATGTGTCGGCGGCTCCCTTCCCTCCCGG‑CCCCTTCTCTTTTTGGCGGATGTTCTTTTATGGTGGAACCCAACCCtcc                                                          >  1:466636/1‑97 (MQ=0)

                                            gagCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCaa                                                       <  2:733777/99‑1 (MQ=255)

                                             agCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCAAg                                                      <  2:601505/99‑1 (MQ=255)

                                               cAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTTTTAGCGGGTGTAGTTTTATTGTAGAACCCCAGCCTTCCAAGCt                                                    >  1:530081/1‑99 (MQ=11)

                                                 aTGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCAAGCTgg                                                  <  2:1137447/99‑1 (MQ=255)

                                                    gATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCAAGCTGGCTa                                               <  2:1225077/99‑1 (MQ=255)

                                                    gATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCAAGCTGGCTa                                               <  2:1058547/99‑1 (MQ=255)

                                                    gATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCAAGCTGGCTa                                               <  2:1403217/99‑1 (MQ=255)

                                                    gATTGAAGCACCATGGGTGTGCGGTTCGATGCCGGCTCGC‑GCCATTGT‑TTGTTGGCGGCTGGAGTTCAATGGAAGAGCCCCATACTTCCAAGCTGGCTa                                               <  2:301998/99‑1 (MQ=9)

                                                     aTTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCAAGCTGGCTAc                                              >  2:547169/1‑99 (MQ=255)

                                                         aaGCTCCATGTGTCGGCGGTTCGATTCCGGCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTACAACCCCAACCTTCCAAGCTGGCTACGCGa                                          >  2:516331/1‑99 (MQ=255)

                                                            cTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCCTTCT‑TTGTTTGCGGGTGTAGTTTAATGGGAGAAACCCCGCCCTCCAAGCTGGCTTCGCGAggt                                       >  1:606402/1‑97 (MQ=14)

                                                            cTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCAAGCTGGCTACGCGAGtt                                       <  2:1298497/99‑1 (MQ=255)

                                                            cTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCAAGCTGGCTACGCGAGtt                                       <  1:1221073/99‑1 (MQ=255)

                                                            cTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCAAGCTGGCTACGCGAGtt                                       <  1:844735/99‑1 (MQ=255)

                                                            cTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCAAGCTGGCTACGCGAGtt                                       <  1:888287/99‑1 (MQ=255)

                                                                 tgtgGCGGCGGTTCGAGTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTTGTTTAATGGTAGAACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGAtt                                  <  2:1002072/99‑1 (MQ=255)

                                                                   tgtCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTTTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCCAGCTGGCCACGCGAGTTCGAAtct                                >  2:461506/1‑99 (MQ=11)

                                                                   tgtCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATtct                                <  1:273080/99‑1 (MQ=255)

                                                                   tgtCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATtct                                <  2:619921/99‑1 (MQ=255)

                                                                    gtCGGCGGTTCGCTTCCGTCTCGC‑GCCCTTCT‑TTGTTTTCGGATGTAGTTTAATGGGAGAACCCCAACCTTCCAAAGTGGATACGCGAGTTCGATtttc                               >  2:11390/1‑99 (MQ=14)

                                                                     tCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCg                              <  2:565647/99‑1 (MQ=255)

                                                                     tCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCAAGCTGGCTAAGCGAGTTCGGTTCTCg                              >  2:68888/1‑99 (MQ=255)

                                                                      cggcggTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGt                             <  1:90724/99‑1 (MQ=255)

                                                                        gcggTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCa                           <  2:153620/99‑1 (MQ=255)

                                                                        gcggTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCa                           <  1:1658632/99‑1 (MQ=255)

                                                                        gcggTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCAAGCTGGCTACGCGAGGTCGATTCTCGTCa                           >  1:1230880/1‑99 (MQ=255)

                                                                        gcggTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCAAGCTGGCTACGCGAGGTCGATTCTCGTCa                           >  1:341159/1‑99 (MQ=255)

                                                                         cggTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCAt                          <  2:468260/99‑1 (MQ=255)

                                                                         cggTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCAt                          <  1:1279375/99‑1 (MQ=255)

                                                                          ggTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCATc                         <  2:895678/99‑1 (MQ=255)

                                                                           gTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCATcc                        >  1:873056/1‑99 (MQ=255)

                                                                             tCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCATCCGc                      <  2:1355427/99‑1 (MQ=255)

                                                                               gATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCATCCGCtt                    >  2:1555868/1‑99 (MQ=255)

                                                                                aTTCCTTCTCGC‑TCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCATCCGCTTa                   <  1:596171/99‑1 (MQ=255)

                                                                                aTTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCAAGCTGGCTACGCGGGGTCGATTCTCGTCCTCCGCTTa                   >  1:103975/1‑99 (MQ=255)

                                                                                aTTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCATCCGCTTa                   >  2:567991/1‑99 (MQ=255)

                                                                                 ttCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCATCCGCTTAg                  >  2:498766/1‑99 (MQ=255)

                                                                                 ttCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCATCCGCTTAg                  <  1:690046/99‑1 (MQ=255)

                                                                                   ccGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCATCCGCTTAGtt                >  2:619675/1‑99 (MQ=255)

                                                                                    cGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCATCCGCTTAGttt               <  2:670494/99‑1 (MQ=255)

                                                                                     gTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCATCCGCTTAGtttt              >  2:726625/1‑99 (MQ=255)

                                                                                      tctcGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCATCCGCTTAGTTTTc             >  2:1207621/1‑99 (MQ=255)

                                                                                       ctcGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCATCCGCTTAGTTTTCa            >  2:1226351/1‑99 (MQ=255)

                                                                                        tcGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCATCCGCTTAGTTTTCAt           <  1:659961/99‑1 (MQ=255)

                                                                                        tcGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCATCCGCTTAGTTTTCAt           <  2:205494/99‑1 (MQ=255)

                                                                                         cgc‑gCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCATCCGCTTAGTTTTCAtt          <  2:878366/99‑1 (MQ=255)

                                                                                           c‑gcCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCATCCGCTTAGTTTTCATTTg        >  2:196580/1‑99 (MQ=255)

                                                                                              ccATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCATCCGCTTAGTTTTCATTTGaa      >  2:1231731/1‑99 (MQ=255)

                                                                                               cATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCATCCGCTTAGTTTTCATTTGaaa     <  2:1492668/99‑1 (MQ=255)

                                                                                                 ttCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCATCCGCTTAGTTTTCATTTGAAAAc   <  2:1078584/99‑1 (MQ=255)

                                                                                                 ttCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCATCCGCTTAGTTTTCATTTGAAAAc   >  2:536047/1‑99 (MQ=255)

                                                                                                 ttCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCATCCGCTTAGTTTTCATTTGAAAAc   >  2:1084239/1‑99 (MQ=255)

                                                                                                  tCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCATCCGCTTAGTTTTCATTTGAAAACa  >  2:165837/1‑99 (MQ=255)

                                                                                                  tCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCATCCGCTTAGTTTTCATTTGAAAACa  >  1:1102831/1‑99 (MQ=255)

AATCCAGCAAGATCCATATCTTTGGCTCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGC‑GCCATTCT‑TTGTTAGCGGATGTAGTTTAATGGTAGAACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCATCCGCTTAGTTTTCATTTGAAAACA  >  CP002094/518118‑518313

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 6 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.