| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_017635 | 985116 = | 46 (1.140) | 9 (0.320) | 8/68 | 1.1 | 23.8% | coding (1049/1392 nt) | ECW_RS04805 | phage tail protein |
| ? | NC_017635 | 987945 = | 26 (0.930) | coding (37/504 nt) | ECW_RS04830 | phage tail protein | |||||
GTATCCATGCACCATTGGCATTAGCTCCTCGCTGAATGACATATCTGGCTTCTCCCAAACCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_017635/985178‑985116‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttctcccaaaccaaCGTTTATGAAAATGCAGAGATAACGGCTAACTGGCATCATCCCCGGTT > NC_017635/987945‑987992 GTATCCATGCACCATTGGCATTAGCTCCTCGCTGAATGACATATCTGGCT > 1:322094/1‑50 TATCCATGCACCATTGGCATTAGCTCCTCGCTGAATGACATATCTGGCTT > 1:1028144/1‑50 TATCCATGCACCATTGGCATTAGCTCCTCGCTGAATGACATATCTGGCTT < 1:1235243/50‑1 ATCCATGCACCATTGGCATTAGCTCCTCGCTGAATGACATATCTGGCTTC > 2:310369/1‑50 TCCATGCACCATTGGCATTAGCTCCTCGCTGAATGACATATCTGGCTTCT < 1:630940/50‑1 CATGCACCATTGGCATTAGCTCCTCGCTGAATGACATATCTGGCTTCTCC < 2:1086056/50‑1 CATGCACCATTGGCATTAGCTCCTCGCTGAATGACATATCTGGCTTCTC < 1:313883/49‑1 GCACCATTGGCATTAGCTCCTCGCTGAATGACATATCTGGCTTCTCCCA > 1:1566170/1‑49 CACCATTGGCATTAGCTCCTCGCTGAATGACATATCTGGCTTCTCCCAAA > 2:893589/1‑50 CACCATTGGCATTAGCTCCTCGCTGAATGACATATCTGGCTTCTCCCAAA < 1:134491/50‑1 ACCATTGGCATTAGCTCCTCGCTGAATGACATATCTGGCTTCTCCCAAAC > 2:241785/1‑50 CATTGGCATTAGCTCCTCGCTGAATGACATATCTGGCTTCTCCCAAACCA < 1:1257506/50‑1 CATTGGCATTAGCTCCTCGCTGAATGACATATCTGGCTTCTCCCAAACCA < 1:1833026/50‑1 CATTGGCATTAGCTCCTCGCTGAATGACATATCTGGCTTCTCCCAAACC > 1:1986670/1‑49 CATTGGCATTAGCTCCTCGCTGAATGACATATCTGGCTTCTCCCAAACC > 2:482082/1‑49 CATTGGCATTAGCTCCTCGCTGAATGACATATCTGGCTTCTCCCAAACC > 1:545367/1‑49 ATTGGCATTAGCTCCTCGCTGAATGACATATCTGGCTTCTCCCAAACC > 1:821512/1‑48 ATTGGCATTAGCTCCTCGCTGAATGACATATCTGGCTTCTCCCAAACC > 1:679558/1‑48 TTAGCTCCTCGCTGAATGACATATCTGGCTTCTCCCAAACCAACGTTTAT < 2:859334/50‑1 AGCTCCTCGCTGAATGACATATCTGGCTTCTCCCAAACCAACGTTTATG < 1:1246922/49‑1 TCCTCGCTGAATGACATATCTGGCTTCTCCCAAACCAACGTTTATGAAAA > 1:204239/1‑50 CCTCGCTGAATGACATATCTGGCTTCTCCCAAACCAACGTTTATGAAAAT > 1:1082693/1‑50 AATGACATATCTGGCTTCTCCCAAACCAACGTTTATGAAAATGCAGAGAT < 1:1571814/50‑1 TGACATATCTGGCTTCTCCCAAACCAACGTTTATGAAAATGCAGAGATAA < 1:214483/50‑1 TGACATATCTGGCTTCTCCCAAACCAACGTTTATGAAAATGCAGAGATAA < 2:1630933/50‑1 ACATATCTGGCTTCTCCCAAACCAACGTTTATGAAAATGCAGAGATAAC < 1:1661173/49‑1 GCTTCTCCCAAACCAACGTTTATGAAAATGCAGAGATAACGGCTAACTGG < 2:305983/50‑1 CTTCTCCCAAACCAACGTTTATGAAAATGCAGAGATAACGGCTAACTGG > 1:689019/1‑49 CCCAAACCAACGTTTATGAAAATGCAGAGATAACGGCTAACTGGCATCAT > 1:2060804/1‑50 CCCAAACCAACGTTTATGAAAATGCAGAGATAACGGCTAACTGGCATCAT > 1:1646519/1‑50 CAAACCAACGTTTATGAAAATGCAGAGATAACGGCTAACTGGCATCATCC < 1:1316614/50‑1 CAAACCAACGTTTATGAAAATGCAGAGATAACGGCTAACTGGCATCATCC < 2:804070/50‑1 AACCAACGTTTATGAAAATGCAGAGATAACGGCTAACTGGCATCATCCCC < 2:1095065/50‑1 AACGTTTATGAAAATGCAGAGATAACGGCTAACTGGCATCATCCCCGGTT > 2:1907524/1‑50 AACGTTTATGAAAATGCAGAGATAACGGCTAACTGGCATCATCCCCGGTT < 1:872989/50‑1 AACGTTTATGAAAATGCAGAGATAACGGCTAACTGGCATCATCCCCGGTT > 1:155643/1‑50 AACGTTTATGAAAATGCAGAGATAACGGCTAACTGGCATCATCCCCGGTT > 2:695092/1‑50 AACGTTTATGAAAATGCAGAGATAACGGCTAACTGGCATCATCCCCGGTT > 1:2049558/1‑50 GTATCCATGCACCATTGGCATTAGCTCCTCGCTGAATGACATATCTGGCTTCTCCCAAACCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_017635/985178‑985116‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttctcccaaaccaaCGTTTATGAAAATGCAGAGATAACGGCTAACTGGCATCATCCCCGGTT > NC_017635/987945‑987992 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |