| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_017635 | 985116 = | 46 (1.140) | 9 (0.320) | 8/68 | 1.1 | 23.8% | coding (1049/1392 nt) | ECW_RS04805 | phage tail protein |
| ? | NC_017635 | 987945 = | 26 (0.930) | coding (37/504 nt) | ECW_RS04830 | phage tail protein | |||||
CATGGAACAGGGACACCAACGGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGCAGAGATAACGGCTAACTGGCATCATCCCCGGTT > NC_017635/987896‑987992 | cATGGAACAGGGACACCAACGGGTAATGCAGAGCCTTCTCCCAAACCAAc > 2:503193/1‑50 (MQ=255) aTGGAACAGGGACACCAACGGGTAATGCAGAGCCTTCTCCCAAACCAACg > 1:9832/1‑50 (MQ=255) aTGGAACAGGGACACCAACGGGTAATGCAGAGCCTTCTCCCAAACCAACg > 2:316096/1‑50 (MQ=255) aTGGAACAGGGACACCAACGGGTAATGCAGAGCCTTCTCCCAAACCAACg > 1:1402719/1‑50 (MQ=255) aaCAGGGACACCAACGGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTa > 1:504508/1‑50 (MQ=255) ttagctcctcgctgaatgacatatctggcttctcccaaaccaaCGTTTAt < 2:859334‑M2/7‑1 (MQ=255) aCAGGGACACCAACGGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTAt > 1:1366826/1‑50 (MQ=255) agctcctcgctgaatgacatatctggcttctcccaaaccaaCGTTTATg < 1:1246922‑M2/8‑1 (MQ=255) tcctcgctgaatgacatatctggcttctcccaaaccaaCGTTTATGaaaa > 1:204239‑M2/39‑50 (MQ=255) cctcgctgaatgacatatctggcttctcccaaaccaaCGTTTATGAAAAt > 1:1082693‑M2/38‑50 (MQ=255) cAACGGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATg > 1:1287504/1‑47 (MQ=255) aaCGGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGCaga < 2:341514/50‑1 (MQ=255) aaCGGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGCaga < 1:1384907/50‑1 (MQ=255) aaCGGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGCaga < 1:850118/50‑1 (MQ=255) gggTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAGATGCAgaga > 2:1963785/1‑49 (MQ=255) gggTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGCAgaga > 2:1617841/1‑49 (MQ=255) gggTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGCAgaga > 2:1769898/1‑49 (MQ=255) gggTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGCAgaga > 1:569188/1‑49 (MQ=255) aatgacatatctggcttctcccaaaccaaCGTTTATGAAAATGCAGAGAt < 1:1571814‑M2/21‑1 (MQ=255) ggTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGCAGAGAt > 1:2036196/1‑49 (MQ=255) tgacatatctggcttctcccaaaccaaCGTTTATGAAAATGCAGAGATaa < 2:1630933‑M2/23‑1 (MQ=255) tgacatatctggcttctcccaaaccaaCGTTTATGAAAATGCAGAGATaa < 1:214483‑M2/23‑1 (MQ=255) gTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGCAGAGATaa > 2:1542257/1‑50 (MQ=255) acatatctggcttctcccaaaccaaCGTTTATGAAAATGCAGAGATAAc < 1:1661173‑M2/24‑1 (MQ=255) aaTGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGCAGAGATAACg > 1:686551/1‑50 (MQ=255) aaTGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGCAGAGATAACg > 1:87505/1‑50 (MQ=255) aaTGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGCAGAGATAACg > 2:1651323/1‑50 (MQ=255) aaTGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGCAGAGATAACg > 2:1356101/1‑50 (MQ=255) aTGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGCAGAGATAACg < 2:2042182/49‑1 (MQ=255) agagCCTTCTCCCAAACCAACGTTTATGAAAATGCAGAGATAACGGCTaa < 1:1243137/50‑1 (MQ=255) agagCCTTCTCCCAAACCAACGTTTATGAAAATGCAGAGATAACGGCTaa > 2:761000/1‑50 (MQ=255) agagCCTTCTCCCAAACCAACGTTTATGAAAATGCAGAGATAACGGCTaa > 1:1632167/1‑50 (MQ=255) agCCTTCTCCCAAACCAACGTTTATGAAAATGCAGAGATAACGGCTAACt > 2:356654/1‑50 (MQ=255) agCCTTCTCCCAAACCAACGTTTATGAAAATGCAGAGATAACGGCTAACt < 2:494329/50‑1 (MQ=255) gcttctcccaaaccaaCGTTTATGAAAATGCAGAGATAACGGCTAACTgg < 2:305983‑M2/34‑1 (MQ=255) cttctcccaaaccaaCGTTTATGAAAATGCAGAGATAACGGCTAACTgg > 1:689019‑M2/16‑49 (MQ=255) cccaaaccaaCGTTTATGAAAATGCAGAGATAACGGCTAACTGGcatcat > 1:2060804‑M2/11‑50 (MQ=255) cccaaaccaaCGTTTATGAAAATGCAGAGATAACGGCTAACTGGcatcat > 1:1646519‑M2/11‑50 (MQ=255) caaaccaaCGTTTATGAAAATGCAGAGATAACGGCTAACTGGCATCATcc < 2:804070‑M2/42‑1 (MQ=255) caaaccaaCGTTTATGAAAATGCAGAGATAACGGCTAACTGGCATCATcc < 1:1316614‑M2/42‑1 (MQ=255) aaccaaCGTTTATGAAAATGCAGAGATAACGGCTAACTGGCATCATcccc < 2:1095065‑M2/44‑1 (MQ=255) aaCGTTTATGAAAATGCAGAGATAACGGCTAACTGGCATCATCCCCGGtt < 1:872989‑M2/48‑1 (MQ=255) aaCGTTTATGAAAATGCAGAGATAACGGCTAACTGGCATCATCCCCGGtt > 2:1907524‑M2/3‑50 (MQ=255) aaCGTTTATGAAAATGCAGAGATAACGGCTAACTGGCATCATCCCCGGtt > 1:2049558‑M2/3‑50 (MQ=255) aaCGTTTATGAAAATGCAGAGATAACGGCTAACTGGCATCATCCCCGGtt > 2:695092‑M2/3‑50 (MQ=255) aaCGTTTATGAAAATGCAGAGATAACGGCTAACTGGCATCATCCCCGGtt > 1:155643‑M2/3‑50 (MQ=255) | CATGGAACAGGGACACCAACGGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGCAGAGATAACGGCTAACTGGCATCATCCCCGGTT > NC_017635/987896‑987992 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |