| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_017635 | 985116 = | 46 (1.140) | 9 (0.320) | 8/68 | 1.1 | 23.8% | coding (1049/1392 nt) | ECW_RS04805 | phage tail protein |
| ? | NC_017635 | 987945 = | 26 (0.930) | coding (37/504 nt) | ECW_RS04830 | phage tail protein | |||||
CGCTTACCAATTTGAGTGGAAAGGATGTAGCTGGTCTTCTCGCATACCTTGGTTTGGGAGAAGCCAGATATGTCATTCAGCGAGGAGCTAATGCCAA > NC_017635/985068‑985164 | cGCTTACCAATTTGAGTGGAAAGGATGTAGCTGGTCTTCTCGCATACCtt < 2:1235207/50‑1 (MQ=255)aaccggggatgatgccagttagccgttatctctgcattttcataaacgtt < 1:872989‑M1/2‑1 (MQ=255)aaccggggatgatgccagttagccgttatctctgcattttcataaacgtt > 2:1907524‑M1/49‑50 (MQ=255)aaccggggatgatgccagttagccgttatctctgcattttcataaacgtt > 1:2049558‑M1/49‑50 (MQ=255)aaccggggatgatgccagttagccgttatctctgcattttcataaacgtt > 2:695092‑M1/49‑50 (MQ=255)aaccggggatgatgccagttagccgttatctctgcattttcataaacgtt > 1:155643‑M1/49‑50 (MQ=255) gCTTACCAATTTGAGTGGAAAGGATGTAGCTGGTCTTCTCGCATACCTTg > 2:1996970/1‑50 (MQ=255) cTTACCAATTTGAGTGGAAAGGATGTAGCTGGTCTTCTCGCATACCTTgg > 2:1977717/1‑50 (MQ=255) cTTACCAATTTGAGTGGAAAGGATGTAGCTGGTCTTCTCGCATACCTTgg > 1:1597330/1‑50 (MQ=255) ttACCAATTTGAGTGGAAAGGATGTAGCTGGTCTTCTCGCATACCTTGGt > 1:1432333/1‑50 (MQ=255) tACCAATTTGAGTGGAAAGGATGTAGCTGGTCTTCTCGCATACCTTGGtt > 1:1968719/1‑50 (MQ=255) ggggatgatgccagttagccgttatctctgcattttcataaacgTTGGtt < 2:1095065‑M1/6‑1 (MQ=255) aCCAATTTGAGTGGAAAGGATGTAGCTGGTCTTCTCGCATACCTTGGttt > 2:521138/1‑50 (MQ=255) ggatgatgccagttagccgttatctctgcattttcataaacgTTGGTTTg < 2:804070‑M1/8‑1 (MQ=255) ggatgatgccagttagccgttatctctgcattttcataaacgTTGGTTTg < 1:1316614‑M1/8‑1 (MQ=255) ccAATTTGAGTGGAAAGGATGTAGCTGGTCTTCTCGCATACCTTGGttt < 1:1916468/49‑1 (MQ=255) atgatgccagttagccgttatctctgcattttcataaacgTTGGTTTggg > 1:1646519‑M1/41‑50 (MQ=255) atgatgccagttagccgttatctctgcattttcataaacgTTGGTTTggg > 1:2060804‑M1/41‑50 (MQ=255) aaTTTGAGTGGAAAGGATGTAGCTGGTCTTCTCGCATACCTTGGTTTgg > 1:1459634/1‑49 (MQ=255) aTTTGAGTGGAAAGGATGTAGCTGGTCTTCTCGCATACCTTGGTTTgg > 2:1920885/1‑48 (MQ=255) gAGTGGAAAGGATGTAGCTGGTCTTCTCGCATACCTTGGTTTGGGAGAAg > 2:1576962/1‑50 (MQ=255) ccagttagccgttatctctgcattttcataaacgTTGGTTTGGGAGAAg > 1:689019‑M1/35‑49 (MQ=255) ccagttagccgttatctctgcattttcataaacgTTGGTTTGGGAGAAGc < 2:305983‑M1/16‑1 (MQ=255) aGTGGAAAGGATGTAGCTGGTCTTCTCGCATACCTTGGTTTGGGAGAAg < 2:1904043/49‑1 (MQ=255) aGTGGAAAGGATGTAGCTGGTCTTCTCGCATACCTTGGTTTGGGAGAAGc > 2:527221/1‑50 (MQ=255) aGTGGAAAGGATGTAGCTGGTCTTCTCGCATACCTTGGTTTGGGAGAAGc > 1:643258/1‑50 (MQ=255) gTGGAAAGGATGTAGCTGGTCTTCTCGCATACCTTGGTTTGGGAGAAggc < 2:914426/50‑3 (MQ=255) gTGGAAAGGATGTAGCTGGTCTTCTCGCATACCTTGGTTTGGGAGAAggc > 2:993120/1‑48 (MQ=255) ggAAAGGATGTAGCTGGTCTTCTCGCATACCTTGGTTTGGGAGAAGc > 2:1040798/1‑47 (MQ=255) aaaGGATGTAGCTGGTCTTCTCGCATACCTTGGTTTGGGAGAAGCCAgtt > 2:1541446/1‑48 (MQ=255) aaaGGATGTAGCTGGTCTTCTCGCATACCTTGGTTTGGGAGAAGCCAGat < 2:28387/50‑1 (MQ=255) aaGGATGTAGCTGGTCTTCTCGCATACCTTGGTTTGGGAGAAGCCAGata < 2:347862/50‑1 (MQ=255) gATGTAGCTGGTCTTCTCGCATACCTTGGTTTGGGAGAAGCCAGATATGt < 1:515916/50‑1 (MQ=255) gATGTAGCTGGTCTTCTCGCATACCTTGGTTTGGGAGAAGCCAGATATGt < 1:618389/50‑1 (MQ=255) gttatctctgcattttcataaacgTTGGTTTGGGAGAAGCCAGATATGt < 1:1661173‑M1/25‑1 (MQ=255) aTGTAGCTGGTCTTCTCGCATACCTTGGTTTGGGAGAAGCCAGATATGt > 2:1511526/1‑49 (MQ=255) ttatctctgcattttcataaacgTTGGTTTGGGAGAAGCCAGATATGTCa < 2:1630933‑M1/27‑1 (MQ=255) ttatctctgcattttcataaacgTTGGTTTGGGAGAAGCCAGATATGTCa < 1:214483‑M1/27‑1 (MQ=255) gTAGCTGGTCTTCTCGCATACCTTGGTTTGGGAGAAGCCAGATATGTCAt > 2:955006/1‑50 (MQ=255) gTAGCTGGTCTTCTCGCATACCTTGGTTTGGGAGAAGCCAGATATGTCAt > 1:1507501/1‑50 (MQ=255) tAGCTGGTCTTCTCGCATACCTTGGTTTGGGAGAAGCCAGATATGTCAtt > 1:1180880/1‑50 (MQ=255) tAGCTGGTCTTCTCGCATACCTTGGTTTGGGAGAAGCCAGATATGTCAtt > 2:85635/1‑50 (MQ=255) atctctgcattttcataaacgTTGGTTTGGGAGAAGCCAGATATGTCAtt < 1:1571814‑M1/29‑1 (MQ=255) cTGGTCTTCTCGCATACCTTGGTTTGGGAGAAGCCAGATATGTCATTCAg > 2:774320/1‑50 (MQ=255) tGGTCTTCTCGCATACCTTGGTTTGGGAGAAGCCAGATATGTCATTCAGc > 2:126735/1‑50 (MQ=255) ggTCTTCTCGCATACCTTGGTTTGGGAGAAGCCAGATATGTCATTCAGc > 2:479103/1‑49 (MQ=255) tcttctCGCATACCTTGGTTTGGGAGAAGCCAGATATGTCATTCAGCgag > 2:425009/1‑50 (MQ=255) tcttctCGCATACCTTGGTTTGGGAGAAGCCAGATATGTCATTCAGCgag < 1:1260600/50‑1 (MQ=255) tcttctCGCATACCTTGGTTTGGGAGAAGCCAGATATGTCATTCAGCgag > 1:142348/1‑50 (MQ=255) cttctCGCATACCTTGGTTTGGGAGAAGCCAGATATGTCATTCAGCgag > 2:859166/1‑49 (MQ=255) attttcataaacgTTGGTTTGGGAGAAGCCAGATATGTCATTCAGCgagg > 1:1082693‑M1/14‑50 (MQ=255) ttttcataaacgTTGGTTTGGGAGAAGCCAGATATGTCATTCAGCgagga > 1:204239‑M1/13‑50 (MQ=255) ttctCGCATACCTTGGTTTGGGAGAAGCCAGATATGTCATTCAGCgag > 2:888148/1‑48 (MQ=255) tctcGCATACCTTGGTTTGGGAGAAGCCAGATATGTCATTCAGCgaggag > 2:1839972/1‑50 (MQ=255) ctcGCATACCTTGGTTTGGGAGAAGCCAGATATGTCATTCAGCgaggag < 2:1954424/49‑1 (MQ=255) tcGCATACCTTGGTTTGGGAGAAGCCAGATATGTCATTCAGCGAGGAGc > 1:1696471/1‑49 (MQ=255) tcGCATACCTTGGTTTGGGAGAAGCCAGATATGTCATTCAGCGAGGAGc > 2:1706397/1‑49 (MQ=255) cataaacgTTGGTTTGGGAGAAGCCAGATATGTCATTCAGCGAGGAGCt < 1:1246922‑M1/41‑1 (MQ=255) gCATACCTTGGTTTGGGAGAAGCCAGATATGTCATTCAGCGAGGAGCTaa > 2:1738676/1‑50 (MQ=255) ataaacgTTGGTTTGGGAGAAGCCAGATATGTCATTCAGCGAGGAGCTaa < 2:859334‑M1/43‑1 (MQ=255) aTACCTTGGTTTGGGAGAAGCCAGATATGTCATTCAGCGAGGAGCTAATg > 2:1796809/1‑50 (MQ=255) aTACCTTGGTTTGGGAGAAGCCAGATATGTCATTCAGCGAGGAGCTAATg > 2:926475/1‑50 (MQ=255) tACCTTGGTTTGGGAGAAGCCAGATATGTCATTCAGCGAGGAGCTAATGc > 1:1496224/1‑50 (MQ=255) aCCTTGGTTTGGGAGAAGCCAGATATGTCATTCAGCGAGGAGCTAATGc > 2:636978/1‑49 (MQ=255) ccTTGGTTTGGGAGAAGCCAGATATGTCATTCAGCGAGGAGCTAATGCCa < 1:400731/50‑1 (MQ=255) cTTGGTTTGGGAGAAGCCAGATATGTCATTCAGCGAGGAGCTAATGCCaa > 2:2066366/1‑50 (MQ=255) | CGCTTACCAATTTGAGTGGAAAGGATGTAGCTGGTCTTCTCGCATACCTTGGTTTGGGAGAAGCCAGATATGTCATTCAGCGAGGAGCTAATGCCAA > NC_017635/985068‑985164 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |