| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_017635 | 2314099 = | 13 (0.320) | 17 (0.610) | 13/68 | 0.6 | 54.0% | coding (38/414 nt) | ECW_RS28245 | hypothetical protein |
| ? | NC_017635 | 2315940 = | 20 (0.720) | pseudogene (1/459 nt) | ECW_RS28250 | phage tail protein | |||||
GACATATCAGGAATTTGGTTTTGCCCGTTACCCACATCCCGTTTTGCCGCTTCTCCCAAACCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_017635/2314162‑2314099‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttctcccaaaccaaGGTATGCGAGAAGACCAGCCACATCTTTTCCACTCAAATGAGTCAGCG > NC_017635/2315940‑2315987 GACATATCAGGAATTTGGTTTTGCCCGTTACCCACATCCCGTTTTGCCGC > 1:762062/1‑50 ACATATCAGGAATTTGGTTTTGCCCGTTACCCACATCCCGTTTTGCCGC < 1:984432/49‑1 ATATCAGGAATTTGGTTTTGCCCGTTACCCACATCCCGTTTTGCCGCTTC > 2:1928056/1‑50 ATATCAGGAATTTGGTTTTGCCCGTTACCCACATCCCGTTTTGCCGCTTC < 1:347999/50‑1 ATATCAGGAATTTGGTTTTGCCCGTTACCCACATCCCGTTTTGCCGCTTC < 1:1877424/50‑1 TATCAGGAATTTGGTTTTGCCCGTTACCCACATCCCGTTTTGCCGCTTCT < 2:1346903/50‑1 CAGGAATTTGGTTTTGCCCGTTACCCACATCCCGTTTTGCCGCTTCTCC > 1:681638/1‑49 AGGAATTTGGTTTTGCCCGTTACCCACATCCCGTTTTGCCGCTTCTCCC < 1:1558268/49‑1 AGGAATTTGGTTTTGCCCGTTACCCACATCCCGTTTTGCCGCTTCTCCC < 2:2042239/49‑1 AGGAATTTGGTTTTGCCCGTTACCCACATCCCGTTTTGCCGCTTCTCCC < 1:409528/49‑1 AGGAATTTGGTTTTGCCCGTTACCCACATCCCGTTTTGCCGCTTCTCCC > 2:1845241/1‑49 AGGAATTTGGTTTTGCCCGTTACCCACATCCCGTTTTGCCGCTTCTCCC > 2:1593686/1‑49 GAATTTGGTTTTGCCCGTTACCCACATCCCGTTTTGCCGCTTCTCCCAAA < 2:1939381/50‑1 AATTTGGTTTTGCCCGTTACCCACATCCCGTTTTGCCGCTTCTCCCAAAC < 1:746631/50‑1 TTTGGTTTTGCCCGTTACCCACATCCCGTTTTGCCGCTTCTCCCAAACCA < 2:415629/50‑1 TTTGGTTTTGCCCGTTACCCACATCCCGTTTTGCCGCTTCTCCCAAACCA < 1:3752/50‑1 TTTGGTTTTGCCCGTTACCCACATCCCGTTTTGCCGCTTCTCCCAAACC > 1:956620/1‑49 CGTTACCCACATCCCGTTTTGCCGCTTCTCCCAAACCAAGGTATGCGAG > 1:798802/1‑49 GTTACCCACATCCCGTTTTGCCGCTTCTCCCAAACCAAGGTATGCGAG > 1:745072/1‑48 TTACCCACATCCCGTTTTGCCGCTTCTCCCAAACCAAGGTATGCGAGAAG < 2:667953/50‑1 TACCCACATCCCGTTTTGCCGCTTCTCCCAAACCAAGGTATGCGAGAAGA > 2:1208621/1‑50 CCCACATCCCGTTTTGCCGCTTCTCCCAAACCAAGGTATGCGAGAAGAC > 2:67557/1‑49 CCACATCCCGTTTTGCCGCTTCTCCCAAACCAAGGTATGCGAGAAGACCA < 2:1394518/50‑1 CCACATCCCGTTTTGCCGCTTCTCCCAAACCAAGGTATGCGAGAAGACCA < 2:1401892/50‑1 CCACATCCCGTTTTGCCGCTTCTCCCAAACCAAGGTATGCGAGAAGACCA < 1:1935009/50‑1 CACATCCCGTTTTGCCGCTTCTCCCAAACCAAGGTATGCGAGAAGACCAG > 1:1060392/1‑50 CACATCCCGTTTTGCCGCTTCTCCCAAACCAAGGTATGCGAGAAGACCAG > 1:633821/1‑50 CATCCCGTTTTGCCGCTTCTCCCAAACCAAGGTATGCGAGAAGACCAGCC < 1:89740/50‑1 CATCCCGTTTTGCCGCTTCTCCCAAACCAAGGTATGCGAGAAGACCAGC > 2:704051/1‑49 TTTTGCCGCTTCTCCCAAACCAAGGTATGCGAGAAGACCAGCCACATCTT > 2:1352630/1‑50 TTTTGCCGCTTCTCCCAAACCAAGGTATGCGAGAAGACCAGCCACATCTT > 1:2032255/1‑50 TTTTGCCGCTTCTCCCAAACCAAGGTATGCGAGAAGACCAGCCACATCTT < 1:1030646/50‑1 TTGCCGCTTCTCCCAAACCAAGGTATGCGAGAAGACCAGCCACATCTTTT > 2:448213/1‑50 CCGCTTCCCCCAAACCAAGGTATGCGAGAAGACCAGCCACATCTTTTCC < 2:1794654/49‑1 CTCCCAAACCAAGGTATGCGAGAAGACCAGCCACATCTTTTCCACTCAA < 1:128619/49‑1 CCCAAACCAAGGTATGCGAGAAGACCAGCCACATCTTTTCCACTCAAAT > 1:1499303/1‑49 CCAACCCAAGGTATGCGAGAAGACCAGCCACATCTTTTCCACTCAAATGA < 2:992787/50‑1 CCAAACCAAGTTATGCGAGAAGACCAGCCACATCTTTTCCACTCAAATGA < 2:947669/50‑1 CCAAACCAAGGTATGCGAGAAGACCAGCTACATCTTTTCCACTCAAATG < 1:725154/49‑1 CCAAACCAAGGTATGCGAGAAGACCAGCCACATCTTTTCCACTCAAATG < 1:348967/49‑1 AAACCAAGGTATGCGAGAAGACCAGCCACATCTTTTCCACTCAAATGAGT < 1:326756/50‑1 AACCAAGTTATGCGAGAAGACCAGCCACATCTTTTCCACTCAAATGAGTC < 2:1775547/50‑1 AACCAAGGTATGCGAGAAGACCAGCCACATCTTTTCCACTCAAATGAGTC < 1:925239/50‑1 AACCAAGGTATGCGAGAAGACCAGCCACATCTTTTCCACTCAAATGAGTC < 2:1214304/50‑1 CAAGGTATGCGAGAAGACCAGCCACATCTTTTCCACTCAAATGAGTCAGC < 1:538800/50‑1 CAAGGTATGCGAGAAGACCAGCCACATCTTTTCCACTCAAATGAGTCAGC < 2:1745604/50‑1 AAGGTATGCGAGAAGACCAGCCACATCTTTTCCACTCAAATGAGTCAGCG > 2:1809634/1‑50 GACATATCAGGAATTTGGTTTTGCCCGTTACCCACATCCCGTTTTGCCGCTTCTCCCAAACCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_017635/2314162‑2314099‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttctcccaaaccaaGGTATGCGAGAAGACCAGCCACATCTTTTCCACTCAAATGAGTCAGCG > NC_017635/2315940‑2315987 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |