| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_017635 | 2314099 = | 13 (0.320) | 17 (0.610) | 13/68 | 0.6 | 54.0% | coding (38/414 nt) | ECW_RS28245 | hypothetical protein |
| ? | NC_017635 | 2315940 = | 20 (0.720) | pseudogene (1/459 nt) | ECW_RS28250 | phage tail protein | |||||
AACCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCA > NC_017635/2314051‑2314147 | cgctgactcatttgagtggaaaagatgtggctggtcttctcgcatacctt > 2:1809634‑M1/49‑50 (MQ=255)aaCCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTT < 2:1844963‑M1/50‑1 (MQ=255) gctgactcatttgagtggaaaagatgtggctggtcttctcgcataccTTg < 1:538800‑M1/3‑1 (MQ=255) gctgactcatttgagtggaaaagatgtggctggtcttctcgcataccTTg < 2:1745604‑M1/3‑1 (MQ=255) aCCTGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTG > 2:83484‑M1/1‑50 (MQ=255) aCCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTG > 2:1748149‑M1/1‑50 (MQ=255) ccGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGG < 2:1734368‑M1/50‑1 (MQ=255) ccGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGG < 1:268285‑M1/50‑1 (MQ=255) ggAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTT > 2:1101868‑M1/1‑50 (MQ=255) gactcatttgagtggaaaagatgtggctggtcttctcgcataccTTGGtt < 1:925239‑M1/6‑1 (MQ=255) gactcatttgagtggaaaagatgtggctggtcttctcgcataccTTGGtt < 2:1214304‑M1/6‑1 (MQ=255) gactcatttgagtggaaaagatgtggctggtcttctcgcataacTTGGtt < 2:1775547‑M1/6‑1 (MQ=255) actcatttgagtggaaaagatgtggctggtcttctcgcataccTTGGttt < 1:326756‑M1/7‑1 (MQ=255) agaTGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTG < 1:1299918‑M1/50‑1 (MQ=255) agaTGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTG > 1:51338‑M1/1‑50 (MQ=255) tcatttgagtggaaaagatgtggctggtcttctcgcataccTTGGGTTgg < 2:992787‑M1/9‑1 (MQ=255) tcatttgagtggaaaagatgtggctggtcttctcgcataacTTGGTTTgg < 2:947669‑M1/9‑1 (MQ=255) gatgatGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGG < 2:689653‑M1/50‑1 (MQ=255) gatgatGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGG > 2:946338‑M1/1‑50 (MQ=255) catttgagtggaaaagatgtggctggtcttctcgcataccTTGGTTTgg < 1:348967‑M1/9‑1 (MQ=255) catttgagtggaaaagatgtagctggtcttctcgcataccTTGGTTTgg < 1:725154‑M1/9‑1 (MQ=255) atgatgCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGG < 2:444899‑M1/50‑1 (MQ=255) atgatgCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGG > 2:813476‑M1/1‑49 (MQ=255) atgatgCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGG > 1:758682‑M1/1‑49 (MQ=255) atttgagtggaaaagatgtggctggtcttctcgcataccTTGGTTTggg > 1:1499303‑M1/40‑49 (MQ=255) gatgCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGG > 2:1879388‑M1/1‑47 (MQ=255) ttgagtggaaaagatgtggctggtcttctcgcataccTTGGTTTGGgag < 1:128619‑M1/12‑1 (MQ=255) atgCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAG < 2:1340945‑M1/49‑1 (MQ=255) tgCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAG > 2:1372158‑M1/1‑48 (MQ=255) tgCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAG > 2:1923022‑M1/1‑48 (MQ=255) gCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAG > 2:1360973‑M1/1‑50 (MQ=255) ccAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGc < 1:1034041/50‑1 (MQ=255) cAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGgt < 2:14547‑M1/50‑3 (MQ=255) aGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGgtg < 1:444720‑M1/50‑4 (MQ=255) ggaaaagatgtggctggtcttctcgcataccTTGGTTTGGGGGAAGCgg < 2:1794654‑M1/18‑1 (MQ=255) ttGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGgtgct < 2:1662760‑M1/50‑6 (MQ=255) aaaagatgtggctggtcttctcgcataccTTGGTTTGGGAGAAGCGGCaa > 2:448213‑M1/30‑50 (MQ=255) gCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGCGGCaa < 1:1596228/49‑1 (MQ=255) cccGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGgtgctcca < 1:975435‑M1/50‑9 (MQ=255) cccGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGgtgctcc < 2:1515576‑M1/49‑8 (MQ=255) cccGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGCGGCaaa < 1:1892134/49‑1 (MQ=255) aagatgtggctggtcttctcgcataccTTGGTTTGGGAGAAGCGGCaaaa < 1:1030646‑M1/23‑1 (MQ=255) aagatgtggctggtcttctcgcataccTTGGTTTGGGAGAAGCGGCaaaa > 1:2032255‑M1/28‑50 (MQ=255) aagatgtggctggtcttctcgcataccTTGGTTTGGGAGAAGCGGCaaaa > 2:1352630‑M1/28‑50 (MQ=255) ccGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGgtgctccag > 2:488095‑M1/1‑41 (MQ=255) cGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGCGGCAAAACg < 1:437030/50‑1 (MQ=255) gTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGgtgctccagct < 1:564272‑M1/50‑12 (MQ=255) gTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGCGGCAAAACgg > 1:1577519/1‑50 (MQ=255) gTTATCTCTGCATTTTCATAAACGTTGGCTTGGGAGAAGCGGCAAAACgg > 1:1866508/1‑50 (MQ=255) ttATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGCGGCAAAACggg < 1:1043554/50‑1 (MQ=255) aTCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGgtgctccagctatt > 2:1049632‑M1/1‑36 (MQ=255) ggctggtcttctcgcataccTTGGTTTGGGAGAAGCGGCAAAACGGGAtg < 1:89740‑M1/30‑1 (MQ=255) gctggtcttctcgcataccTTGGTTTGGGAGAAGCGGCAAAACGGGAtg > 2:704051‑M1/20‑49 (MQ=255) ctctGCATTTTCATAAACGTTGGTTTGGGAGAAGgtgctccagctattgg > 1:1912886‑M1/1‑34 (MQ=255) ctggtcttctcgcataccTTGGTTTGGGAGAAGCGGCAAAACGGGAtgtg > 1:1060392‑M1/19‑50 (MQ=255) ctggtcttctcgcataccTTGGTTTGGGAGAAGCGGCAAAACGGGAtgtg > 1:633821‑M1/19‑50 (MQ=255) tggtcttctcgcataccTTGGTTTGGGAGAAGCGGCAAAACGGGATGTgg < 2:1401892‑M1/33‑1 (MQ=255) tggtcttctcgcataccTTGGTTTGGGAGAAGCGGCAAAACGGGATGTgg < 2:1394518‑M1/33‑1 (MQ=255) tggtcttctcgcataccTTGGTTTGGGAGAAGCGGCAAAACGGGATGTgg < 1:1935009‑M1/33‑1 (MQ=255) tGCATTTTCATAAACGTTGGTTTGGGAGAAGgtgctccagctattg < 1:492555‑M1/46‑16 (MQ=255) tGCATTTTCATAAACGTTGGTTTGGGAGAAGCGGCAAAACGGGAtgtg < 1:2053418/48‑1 (MQ=255) tGCATTTTCATAAACGTTGGTTTGGGAGAAGCGGCAAAACGGGAtg < 2:1807012/46‑1 (MQ=255) gtcttctcgcataccTTGGTTTGGGAGAAGCGGCAAAACGGGATGTggg > 2:67557‑M1/16‑49 (MQ=255) tcttctcgcataccTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTa > 2:1208621‑M1/15‑50 (MQ=255) cATTTTCATAAACGTTGGTTTGGGAGAAGgtgctccagctattggcgttc > 1:754851‑M1/1‑29 (MQ=255) cATTTTCATAAACGTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGt < 2:1522702/49‑1 (MQ=255) cATTTTCATAAACGTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTa < 1:1330996/50‑1 (MQ=255) cttctcgcataccTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTaa < 2:667953‑M1/37‑1 (MQ=255) aTTTTCATAAACGTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTaa < 2:1633860/50‑1 (MQ=255) ttttCATAAACGTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAAc > 2:1188244/1‑50 (MQ=255) ctcgcataccTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAAc > 1:745072‑M1/11‑48 (MQ=255) ctcgcataccTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACg > 1:798802‑M1/11‑49 (MQ=255) cATAAACGTTGGTTTGGGAGAAGgtgctccagctattggcgttccgttct > 2:1748525‑M1/1‑23 (MQ=255) tAAACGTTGGTTTGGGAGAAGgtgctccagctattggcgttccgttcttc < 2:1465375‑M1/50‑30 (MQ=255) aaCGTTGGTTTGGGAGAAGgtgctccagctattggcgttccgttcttct < 2:711750‑M1/49‑31 (MQ=255) cGTTGGTTTGGGAGAAGgtgctccagctattggcgttccgttcttctggc < 1:774519‑M1/50‑34 (MQ=255) gTTGGTTTGGGAGAAGgtgctccagctattggcgttccgttcttctggcc < 1:841211‑M1/50‑35 (MQ=255) | AACCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCA > NC_017635/2314051‑2314147 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |