New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002745 | 2325293 = | 264 (1.120) | 3 (0.010) | 3/462 | 12.6 | 1.1% | coding (882/1212 nt) | SA_RS11850 | MFS transporter |
? | NC_002745 | 2325304 = | 267 (1.130) | coding (893/1212 nt) | SA_RS11850 | MFS transporter | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
CTATATGAAAACATATGAGTAAATAACCCAAGGAATGATGGACCGAAGCCGACACCTGCATCTAGACCAACGTAAAAAGTAGATGTCGCGATACCATATTTAATCGGGGGTGAGACTTTTATCGCAATAGATTGCATTGCAGATGATAAATTTCCATACCCTAAACCTAGGCAAGCACCAGCAAGTAATATTAACCAGCTTTGATAGCTTGAAATTAAGCACACAAATGAAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002745/2325526‑2325293 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gTGTGCTTAATTTCAAGCTATCAAAGCTGGTTAATATTACTTGCTGGTGCTTGCCTAGGTTTAGGGTATGGAAATTTATCATCTGCAATGCAATCTATTGCGATAAAAGTCTCACCCCCGATTAAATATGGTATCGCGACATCTACTTTTTACGTTGGTCTAGATGCAGGTGTCGGCTTCGGTCCATCATTCCTTGGGTTATTTACTCATATGTTTTCATATAGTGAAAT > NC_002745/2325304‑2325532 CTATATGAAAACATATGAGTAAATAACCCAAGGAATGATGGACCGAAGCCGACACCTGCATCTAGACCAACGTAAAAAGTAGATGTCGCGATACCATATTTAATCGGGGGTGAGACTTTTATCGCAATAGATTGCATTGCAGATGATAAATTTCCATACCCTAAACCTAGGCAAGCACCAGCAAGTAATATTAACCAGCTTTGATAGCTTGAAATTAAGCACACAAATGAAAGG < 2:197494/234‑1 CTAGACCAACGTAAAAAGTAGATGTCGCGATACCATATTTAATCGGGGGTGAGACTTTTATCGCAATAGATTGCATTGCAGATGATAAATTTCCATACCCTAAACCTAGGCAAGCACCAGCAAGTAATATTAACCAGCTTTGATAGCTTGAAATTAAGCACACAAATGAAAGGTGTGCTTAATTTCAAGCTATCAAAGCTGGTTAATATTACTTGCTGGTGCTTGCCTAGGTTT > 2:651265/1‑234 AAGTAGATGTCGCGATACCATATTTAATCGGGGGTGAGACTTTTATCGCAATAGATTGCATTGCAGATGATAAATTTCCATACCCTAAACCTAGGCAAGCACCAGCAAGTAATATTAACCAGCTTTGATAGCTTGAAATTAAGCACACAAATGAAAGGTGTGCTTAATTTCAAGCTATCAAAGCTGGTTAATATTACTTGCTGGTGCTTGCCTAGGTTTAGGGTATGGAAATTT < 1:651265/234‑1 attGGTGTGCTGAATTTCAAGCTAGCAAAGCTGGTTAATATTACTTGCTGGTGCTTGCCTAGGTTTAGGGTATGGAAATTTATCATCTGCAATGCAGTCTATTGCGATAAAAGTCTCACCCCCGATTAAATATGGTATCGCGACATCTACTTTTTACGTTGGTCTAGATGCAGGTGTCGGCTTCGGTCCATCATTCCTTGGGTTATTTACTCATATGTTTTCATATAGTGAAAT < 2:1397628/231‑1 CTATATGAAAACATATGAGTAAATAACCCAAGGAATGATGGACCGAAGCCGACACCTGCATCTAGACCAACGTAAAAAGTAGATGTCGCGATACCATATTTAATCGGGGGTGAGACTTTTATCGCAATAGATTGCATTGCAGATGATAAATTTCCATACCCTAAACCTAGGCAAGCACCAGCAAGTAATATTAACCAGCTTTGATAGCTTGAAATTAAGCACACAAATGAAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002745/2325526‑2325293 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gTGTGCTTAATTTCAAGCTATCAAAGCTGGTTAATATTACTTGCTGGTGCTTGCCTAGGTTTAGGGTATGGAAATTTATCATCTGCAATGCAATCTATTGCGATAAAAGTCTCACCCCCGATTAAATATGGTATCGCGACATCTACTTTTTACGTTGGTCTAGATGCAGGTGTCGGCTTCGGTCCATCATTCCTTGGGTTATTTACTCATATGTTTTCATATAGTGAAAT > NC_002745/2325304‑2325532 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |