mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal read alignment evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | ACB122 | 1,123,238 | 0 | C | A | 57.7% | 5.4 / 21.1 | 27 | intergenic (‑240/+64) | gcvH_1/CJ019_01062 | Glycine cleavage system H protein/hypothetical protein |
| * | ACB122 | 4,927,834 | 0 | A | C | 47.8% | 4.4 / 13.6 | 47 | W194G (TGG→GGG) | srp54 | Signal recognition particle 54 kDa protein |
| * | ACB122 | 1,721,878 | 0 | A | C | 38.7% | 19.9 / 11.9 | 31 | G95G (GGT→GGG) | CJ019_01617 | hypothetical protein |
| * | ACB122 | 5,384,418 | 0 | C | G | 38.5% | 47.6 / 15.8 | 40 | intergenic (+539/‑319) | CJ019_05064/CJ019_05067 | putative protein/hypothetical protein |
| * | ACB122 | 4,425,087 | 0 | G | C | 37.9% | 36.3 / 15.1 | 29 | intergenic (‑29/‑89) | CJ019_04200/CJ019_04201 | hypothetical protein/hypothetical protein |
| * | ACB122 | 3,983,006 | 0 | A | C | 34.5% | 94.9 / 10.0 | 59 | T627P (ACC→CCC) | apc3 | Acetophenone carboxylase gamma subunit |
| * | ACB122 | 5,384,415 | 0 | G | T | 34.2% | 50.5 / 11.4 | 41 | intergenic (+536/‑322) | CJ019_05064/CJ019_05067 | putative protein/hypothetical protein |
| * | ACB122 | 5,384,407 | 0 | C | G | 32.6% | 53.4 / 17.0 | 43 | intergenic (+528/‑330) | CJ019_05064/CJ019_05067 | putative protein/hypothetical protein |
| * | ACB122 | 5,384,431 | 0 | C | G | 32.6% | 68.6 / 14.4 | 43 | intergenic (+552/‑306) | CJ019_05064/CJ019_05067 | putative protein/hypothetical protein |
| * | ACB122 | 4,277,043 | 0 | T | G | 31.3% | 92.4 / 15.4 | 68 | G278G (GGT→GGG) | hbd | 3‑hydroxybutyryl‑CoA dehydrogenase |
| * | ACB122 | 2,835,167 | 0 | C | G | 30.4% | 51.7 / 19.3 | 47 | R171T (AGA→ACA) | CJ019_02688 | hypothetical protein |
| * | ACB122 | 5,384,428 | 0 | G | T | 27.9% | 53.7 / 10.0 | 43 | intergenic (+549/‑309) | CJ019_05064/CJ019_05067 | putative protein/hypothetical protein |
| * | ACB122 | 4,413,553 | 0 | A | C | 26.3% | 90.8 / 11.0 | 57 | I7L (ATC→CTC) | CJ019_04183 | hypothetical protein |
| * | ACB122 | 5,058,731 | 0 | G | T | 24.4% | 68.0 / 13.8 | 41 | D78E (GAC→GAA) | proP_7 | Proline/betaine transporter |
| * | ACB122 | 3,273,895 | 0 | C | A | 24.0% | 76.2 / 20.0 | 50 | D40E (GAC→GAA) | fabG_5 | 3‑oxoacyl‑[acyl‑carrier‑protein] reductase FabG |
| * | ACB122 | 3,365,238 | 0 | G | C | 20.4% | 192.4 / 10.0 | 89 | intergenic (‑109/‑10) | csoR/CJ019_03165 | Copper‑sensing transcriptional repressor CsoR/hypothetical protein |