New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP043523	= 234705	451 (0.860)	181 (0.360)	57/290	24.3	29.2%	intergenic (+79/+40)	FTN78_chr0290/FTN78_chr0291	Transcription elongation factor GreA/Mobile element protein
	?	CP043523	235954 =	NA (NA)					intergenic (‑62/+12)	FTN78_chr0292/FTN78_chr0293	Transposase/Putative transposase InsK for insertion sequence element IS150
Rejected: Coverage evenness skew score above cutoff.

TCGAATTTTCTTCTTGCCATAATAAACCTTTCCACGATTTCTCTTAACTTTGTGTCTAGTTTATTATAACCTTTCCAAAATACTTGGATTTTTTTAATTGTTTTGGTAATTCAAGCGAAATTGAATTGGACTCATCCAGTTCAATTTTTG  >  CP043523/235873‑236022                                                                                  |                                                                     tctaaTTTTCCTCTTGCCATAATAAACCTTTCCACGATTTCTCTTAACTTTGTGTCTAGTTTATTATAACCTTTCCAAAATACTTGGATTTTTTTAATTGTTTTGGTAATTCAAGCGAAATTGAATTGGACTCATCCAGTTCAATTtttg  <  1:3116631/147‑1 (MQ=1)                                                                                  |                                                                     TCGAATTTTCTTCTTGCCATAATAAACCTTTCCACGATTTCTCTTAACTTTGTGTCTAGTTTATTATAACCTTTCCAAAATACTTGGATTTTTTTAATTGTTTTGGTAATTCAAGCGAAATTGAATTGGACTCATCCAGTTCAATTTTTG  >  CP043523/235873‑236022

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.