New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP043523 = 189519623 (0.050)493 (0.980)
+TGAGTGAG
179/266 1.4 95.6% coding (316/891 nt) FTN78_chr1944 Mobile element protein
?CP043523 1895197 = NA (NA)coding (317/891 nt) FTN78_chr1944 Mobile element protein

Only 100 of 526 total aligned reads displayed.

AGTGAAACACTTAAAGCTAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAATGAGTGTATCCATTATTGACAGCTTCCCCATTCCTTTGTGTCAGTCGATTCGTAATTTCAGAAGCAAAGTTCTTGGAGATTATGCAAATGTTGGCTACAATGCTACAAAGGGACAGTACTT  >  CP043523/1895049‑1895317
                                                                                                                                                    |                                                                                                                          
aGTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGaa                                                                                                                            >  1:1491288/1‑148 (MQ=17)
 gTGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAt                                                                                                                           >  1:427524‑M1/1‑147 (MQ=255)
  tGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtg                                                                                                                          <  2:456691‑M1/148‑3 (MQ=255)
  tGAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTCTATTCCCTAATTTCCTAGAATATTCTCGCTTTGTTCATCGTTGTAATGCACTCCTACTGAGTATTCAACTCATTCGCCAAGCTCTCGTCTTTAAAGAAGTTGAAGGGAtt                                                                                                                         <  2:3617523/148‑2 (MQ=11)
   gAAACACTTAAAGCAAAGCACCAATTGGCTCAAAGTCTATTCCCTAATTTCCTAGAATATTCTCGCTTTGTTCATCGTTGTAATGCACTCCTACTGAGTATTCAACTCATTCGCCAAGCTCTCGTCTTTAAAGAAGTTGAAGGGAttg                                                                                                                        >  2:2766637/1‑146 (MQ=11)
    aaaCACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgag                                                                                                                        >  2:2958964‑M1/1‑144 (MQ=255)
     aaCACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagt                                                                                                                       <  1:3845163‑M1/148‑6 (MQ=255)
     aaCACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagt                                                                                                                       <  1:3631055‑M1/148‑6 (MQ=255)
     aaCACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagt                                                                                                                       <  1:2485869‑M1/148‑6 (MQ=255)
     aaCACTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagt                                                                                                                       <  1:1341152‑M1/148‑6 (MQ=255)
      acacTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtg                                                                                                                      >  1:4178124‑M1/1‑142 (MQ=255)
       cacTTAAAGCAAAGCACCAATTGGCTCAAAGTCTATTCCCTAATTTCCTAGAATATTCTCGCTTTGTTCATCGTTGTAATGCACTCCTACTGAGTATTCAACTCATTCGCCAAGCTCTCGTCTTTAAAGAAGTTGAAGGGAttgatgt                                                                                                                    >  1:3348264/1‑142 (MQ=2)
        acTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgag                                                                                                                    >  1:3056984‑M1/1‑140 (MQ=255)
        acTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgag                                                                                                                    <  2:195726‑M1/148‑9 (MQ=255)
         cTTAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagt                                                                                                                   <  1:2669501‑M1/148‑10 (MQ=255)
          ttAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtg                                                                                                                  >  2:4274167‑M1/1‑138 (MQ=255)
          ttAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtg                                                                                                                  >  2:2204902‑M1/1‑138 (MQ=255)
           tAAAGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtga                                                                                                                 >  1:3464585‑M1/1‑137 (MQ=255)
             aagcaaagcaCCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagt                                                                                                               >  1:2985861‑M1/1‑135 (MQ=255)
              agcaaagcacCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtg                                                                                                              >  1:1749541‑M1/5‑134 (MQ=255)
              aGCAAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtg                                                                                                              >  2:1632371‑M1/1‑134 (MQ=255)
                caaagcACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgta                                                                                                            >  1:4558215‑M1/3‑132 (MQ=255)
                  aaGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatc                                                                                                          <  2:3190605‑M1/148‑19 (MQ=255)
                   aGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgcgtgagtgagtgtatcc                                                                                                         >  1:973446‑M1/1‑129 (MQ=255)
                    gCACCAACTTGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatcca                                                                                                        <  2:31252‑M1/148‑21 (MQ=255)
                      aCCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccatt                                                                                                      <  2:3775045‑M1/148‑23 (MQ=255)
                       ccAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccatta                                                                                                     >  2:249247‑M1/1‑125 (MQ=255)
                          aTTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattg                                                                                                  <  2:46111‑M1/148‑27 (MQ=255)
                                tCAAATTTTATTTCCTAATTTCTTAGAATATTCTAGCTTTGTACGCCGTTTTAATTCCCTTTTACCGAGTATCCAAGACATTCGACAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtatatccattattgacagct                                                                                            <  2:1230861‑M1/148‑33 (MQ=255)
                                 cAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagctt                                                                                           >  2:2140919‑M1/1‑115 (MQ=255)
                                  aaaGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttc                                                                                          >  2:4487676‑M1/1‑114 (MQ=255)
                                  aaaGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttc                                                                                          <  1:1256160‑M1/148‑35 (MQ=255)
                                   aaGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcc                                                                                         >  1:3726604‑M1/1‑113 (MQ=255)
                                    aGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttccc                                                                                        >  1:4400722‑M1/1‑112 (MQ=255)
                                    aGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttccc                                                                                        >  1:2234107‑M1/1‑112 (MQ=255)
                                     gtctATTCCCTAATTTCCTAGAATATTCTCGCTTTGTTCATCGTTGTAATGCACTCCTACTGAGTATTCAACTCATTCGCCAAGCTCTCGTCTTTAAAGAAGTTGAAGGGATTGATGTGTCTATTATTGACAGCTTTCCCATTCCttt                                                                                      >  2:3312797/4‑148 (MQ=0)
                                     gtctATTCCCTAATTTCCTAGAATATTCTCGCTTTGTTCATCGTTGTAATGCACTCCTACTGAGTATTCAACTCATTCGCCAAGCTCTCGTCTTTAAAGAAGTTGAAGGGATTGATGTGTCTATTATTGACAGCTTTCCCATTCCttt                                                                                      >  2:4532578/4‑148 (MQ=0)
                                     gTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccc                                                                                       >  2:1353624‑M1/1‑111 (MQ=255)
                                       ttATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttccccct                                                                                     >  2:730766‑M1/1‑109 (MQ=255)
                                        tATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttccccctt                                                                                    <  1:1825036‑M1/148‑41 (MQ=255)
                                        tATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttccccctt                                                                                    <  2:856718‑M1/148‑41 (MQ=255)
                                          tttcctaatttcctaGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcc                                                                                  >  2:4024470‑M1/1‑106 (MQ=255)
                                          tttcctaatttcctaGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcc                                                                                  >  2:2284489‑M1/1‑106 (MQ=255)
                                          ttccctaatttcctaGAATATTCTCGCTTTGTTCATCGTTGTAATGCACTCCTACTGAGTATTCAACTCATTCGCCAAGCTCTCGTCTTTAAAGAAGTTGAAGGGATTGATGTGTCTATTATTGACAGCTTTCCCATTCCTTTGTGTc                                                                                 >  2:351681/4‑148 (MQ=0)
                                           ttcctaatttcctaGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcct                                                                                 >  2:20599‑M1/1‑105 (MQ=255)
                                            tcctaatttcctaGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcctt                                                                                <  2:3449548‑M1/148‑45 (MQ=255)
                                             cctactgtcctaGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttccttt                                                                               <  1:935272‑M1/148‑46 (MQ=255)
                                             cctaatttcctaGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttccttt                                                                               >  1:2939358‑M1/1‑103 (MQ=255)
                                                aatttcctaGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcctttgtg                                                                            >  1:3905569‑M1/1‑100 (MQ=255)
                                                 atttcctaGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcctttgtgt                                                                           <  1:1901852‑M1/148‑50 (MQ=255)
                                                       taGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcctttgtgtcagcct                                                                     >  1:4699120‑M1/1‑93 (MQ=255)
                                                         gAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcctttgtgtcagcctat                                                                   <  2:3729840‑M1/148‑58 (MQ=255)
                                                         gAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcctttgtgtcagcctat                                                                   <  1:4451771‑M1/148‑58 (MQ=255)
                                                           atatTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcctttgtgtcagcctattc                                                                 >  2:796166‑M1/1‑89 (MQ=255)
                                                               tctcGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcctttgtgtcagcctattcgtaa                                                             >  1:1039717‑M1/1‑85 (MQ=255)
                                                                  cGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagagagtgtatccattattgacagcttcccccttcctttgtgtcagcctattcgtaattt                                                          >  2:1888904‑M1/1‑82 (MQ=255)
                                                                     tttGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcctttgtgtcagcctattcgtaatttcag                                                       >  1:804235‑M1/1‑79 (MQ=255)
                                                                      ttGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcctttgtgtcagcctattcgtaatttcaga                                                      <  2:1148866‑M1/148‑71 (MQ=255)
                                                                      ttGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcctttgtgtcagcctattcgtaatttcaga                                                      >  1:1191837‑M1/1‑78 (MQ=255)
                                                                      ttGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcctttgtgtcagcctattcgtaatttcaga                                                      <  1:3218739‑M1/148‑71 (MQ=255)
                                                                       tGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcctttgtgtcagcctattcgtaatttcagaa                                                     >  2:1689233‑M1/1‑77 (MQ=255)
                                                                        gTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcctttgtgtcagcctattcgtaatttcagaag                                                    >  1:709541‑M1/1‑76 (MQ=255)
                                                                         tCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcctttgtgtcagcctattcgtaatttcagaagc                                                   <  1:1083050‑M1/148‑74 (MQ=255)
                                                                          ccgccgTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcctttgtgtcagcctattcgtaatttcagaagca                                                  <  2:1434798‑M1/148‑75 (MQ=255)
                                                                          ccgccgTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcctttgtgtcagcctattcgtaatttcagaagca                                                  >  2:3236464‑M1/1‑74 (MQ=255)
                                                                          ccgccgTTGTAATGCCCTCTTACCGAGCATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttccccattcctttgtgtcagcctattcgtaatttcagaagca                                                  >  1:3281295‑M1/1‑74 (MQ=255)
                                                                             ccgTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcctttgtgtcagcctattcgtaatttcagaagcaaag                                               <  2:1095732‑M1/148‑78 (MQ=255)
                                                                             ccgTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcctttgtgtcagcctattcgtaatttcagaagcaaag                                               <  1:2891548‑M1/148‑78 (MQ=255)
                                                                                ttGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcctttgtgtcagcctattcgtaatttcagaagcaaagttc                                            <  2:412192‑M1/148‑81 (MQ=255)
                                                                                ttGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcctttgtgtcagcctattcgtaatttcagaagcaaagttc                                            <  1:2062675‑M1/148‑81 (MQ=255)
                                                                                 tGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcctttgtgtcagcctattcgtaatttcagaagcaaagttct                                           >  2:906312‑M1/1‑67 (MQ=255)
                                                                                  gTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcctttgtgtcagcctattcgtaatttcagaagcaaagttctt                                          <  1:3171911‑M1/148‑83 (MQ=255)
                                                                                     aTGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcctttgtgtcagcctattcgtaatttcagaagcaaagttcttgga                                       >  1:4124177‑M1/1‑63 (MQ=255)
                                                                                      tGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcctttgtgtcagcctattcgtaatttcagaagcaaagttcttggag                                      >  1:154649‑M1/1‑62 (MQ=255)
                                                                                       gCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcctttgtgtcagcctattcgtaatttcagaagcaacgttcttggaga                                     >  2:2702563‑M1/1‑61 (MQ=255)
                                                                                        cccTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcctttgtgtcagcctattcgtaatttcagaagcaaagttcttggagat                                    <  1:1063561‑M1/148‑89 (MQ=255)
                                                                                        cccTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcctttgtgtcagcctattcgtaatttcagaagcaaagttcttggagat                                    >  1:4001187‑M1/1‑60 (MQ=255)
                                                                                         ccTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcctttgtgtcagcctattcgtaatttcagaagcaaagttcttggagatt                                   <  2:2829375‑M1/148‑90 (MQ=255)
                                                                                         ccTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcctttgtgtcagcctattcgtaatttcagaagcaaagttcttggagatt                                   <  1:1946599‑M1/148‑90 (MQ=255)
                                                                                         ccTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcctttgtgtcagcctattcgtaatttcagaagcaaagttcttggagatt                                   >  1:562068‑M1/1‑59 (MQ=255)
                                                                                           tctTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcctttgtgtcagcctattcgtaatttcagaagcaaaggtcttggagattat                                 >  2:1806184‑M1/1‑57 (MQ=255)
                                                                                            ctTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcctttgtgtcagcctattcgtaatttcagaagcaaagttcttggagattatg                                <  1:258575‑M1/148‑93 (MQ=255)
                                                                                              tACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcctttgtgtcagcctattcgtaatttcagaagcaaagttcttggagattatgca                              <  2:595415‑M1/148‑95 (MQ=255)
                                                                                               aCCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcctttgtgtcagcctattcgtaatttcagaagcaaagttcttggagattatgcaa                             >  1:1985949‑M1/1‑53 (MQ=255)
                                                                                               aCCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcctttgtgtcagcctattcgtaatttcagaagcaaagttcttggagattatgcaa                             <  1:2376577‑M1/148‑96 (MQ=255)
                                                                                               aCCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgaatgtatccattattgacagcttcccccttcctttgtgtcagcctattcgtaatttcagaagcaaagttcttggagattatgcaa                             <  2:3888666‑M1/148‑96 (MQ=255)
                                                                                                 cGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcctttgtgtcagcctattcgtaatttcagaagcaaagttcttggagattatgcaaat                           >  2:4384767‑M1/1‑51 (MQ=255)
                                                                                                     tATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcctttgtgtcagcctattcgtaatttcagaagcaaagttcttggagattatgcaaatgttg                       <  2:2349958‑M1/148‑102 (MQ=255)
                                                                                                     tATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcctttgtgtcagcctattcgtaatttcagaagcaaagttcttggagattatgcaaatgttg                       >  1:1621037‑M1/1‑47 (MQ=255)
                                                                                                       tCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcctttgtgtcagcctattcgtaatttcagaagcaaagttcttggagattatgcaaatgttggc                     >  1:2768677‑M1/1‑45 (MQ=255)
                                                                                                        ccAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcctttgtgtcagcctattcgtaatttcagaagcaaagttcttggagattatgcaaatgttggct                    <  2:2885218‑M1/148‑105 (MQ=255)
                                                                                                          aaGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcctttgtgtcagcctattcgtaatttcagaagcaaagttcttggagattatgcaaatgttggctac                  >  1:3481910‑M1/1‑42 (MQ=255)
                                                                                                            gTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcctttgtgtcagcctattcgtaatttcagaagcaaagttcttggagattatgcaaatgttggctacaa                <  2:4674856‑M1/148‑109 (MQ=255)
                                                                                                                    ccAAGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcctttgtgtcagcctattcgtaatttcagaagcaaagttcttggagattatgcaaatgttggctacaatgctacaa        <  2:663331‑M1/148‑117 (MQ=255)
                                                                                                                       aGCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcctttgtgtcagcctattcgtaatttcagaagcaaagttcttggagattatgcaaatgttggctacaatgctacaaagg     <  2:4180496‑M1/148‑120 (MQ=255)
                                                                                                                        gCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcctttgtgtcagcctattcgtaatttcagaagcaaggttcttggagattatgcaaatgttggctacaatgctacaaaggg    <  1:1435461‑M1/148‑121 (MQ=255)
                                                                                                                        gCACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcctttgtgtcagcctattcgtaatttcagaagcaaagttcttggagattatgcaaatgttggctacaatgctacaaaggg    >  2:3034424‑M1/1‑28 (MQ=255)
                                                                                                                         cACTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcctttgtgtcagcctattcgtaatttcagaagcaaagttcttggagattatgcaaatgttggctacaatgctacaaaggga   <  1:45105‑M1/148‑122 (MQ=255)
                                                                                                                          aCTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcctttgtgtcagcctattcgtaatttcagaagcaaagttcttggagattatgcaaatgttggctacaatgctacaaagggac  >  1:2812214‑M1/1‑26 (MQ=255)
                                                                                                                          aCTCGTCTTTAAAGAGGTTGAAGGAAtgagtgagtgagtgtatccattattgacagcttcccccttcctttgtgtcagcctattcgtaatttcagaagcaaagttcttggagattatgcaaatgttggctacaatgctacaaagggac  >  2:2604442‑M1/1‑26 (MQ=255)
                                                                                                                                                    |                                                                                                                          
AGTGAAACACTTAAAGCTAAGCACCAATTGGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTTGTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAATGAGTGTATCCATTATTGACAGCTTCCCCATTCCTTTGTGTCAGTCGATTCGTAATTTCAGAAGCAAAGTTCTTGGAGATTATGCAAATGTTGGCTACAATGCTACAAAGGGACAGTACTT  >  CP043523/1895049‑1895317

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.