| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP043523 | 234703 = | NA (NA) | 548 (1.140) +CGGAGGTCTTTTCT |
213/266 | 0.1 | 49.4% | intergenic (+77/+42) | FTN78_chr0290/FTN78_chr0291 | Transcription elongation factor GreA/Mobile element protein |
| ? | CP043523 | = 1998587 | 622 (1.170) | intergenic (‑79/‑166) | FTN78_chr2059/FTN78_chr2060 | Mobile element protein/Sulfate permease | |||||
Only 100 of 1225 total aligned reads displayed.
TCTTGCCACAGCTTCATACGTTAAATCAGTTGTTAAATAACATTGTACCGCATTTTCTTTCAACTCCATAGAATAATTTCTATTGACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGACTAGATGAGCTTACGTTGTGCAGTTTAGCAAGATAGGTAGAGAGCCTCCCTGCCAGATAAATAATCTTGAATAACGCGTTGTTTTAATTCTATGGAATATTTGACCATAAGAAAAGACCTCCGAAATATAGATTTGAAAAGTCTATAT > CP043523/1998440‑1998735 | cTTGCCACAGCTTCATACGTTAAATCAGTTGTTAAATAACATTGTACCGCATTTTCTTTCAACTCCATAGAATAATTTTTATTTACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGAa < 1:3536727‑M2/148‑2 (MQ=255) tGCCACAGCTTCATACGTTAAATCAGTTGTTAAATAACATTGTACCGCATTTTCTTTCAACTCCATAGAATAATTTTTATTTACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGAaga > 2:128713‑M2/1‑145 (MQ=255) ccACAGCTTCATACGTTAAATCAGTTGTTAAATAACATTGTACCGCATTTTCTTTCAACTCCATAGAATAATTTTTATTTACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGAagaaa > 2:2986904‑M2/1‑143 (MQ=255) acaGCTTCATACGTTAAATCAGTTGTTAAATAACATTGTACCGCATTTTCTTTCAACTCCATAGAATAATTTCTATTGACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGACTAGATg < 1:1189765/148‑1 (MQ=35) caGCTTCATACGTTAAATCAGTTGTTAAATAACATTGTACCGCATTTTCTTTCAACTCCATAGAATAATTTCTATTGACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGACTAGATGa > 1:416627/1‑148 (MQ=35) gCTTCATACGTTAAATCAGTTGTTAAATAACATTGTACCGCATTTTCTTTCAACTCCATAGAATAATTTCTATTGACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGACTAGATGAGc < 1:64521/148‑1 (MQ=38) tCATACGTTAAATCAGTTGTTAAATAACATTGTACCGCATTTTCTTTCAACTCCATAGAATAATTTCTATTGACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGCCTAGATGAGCTTa > 2:3261868/1‑148 (MQ=255) cATACGTTAAATCAGTTGTTAAATAACATTGTACCGCATTTTCTTTCAACTCCATAGAATAATTTTTATTTACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGAagaaaagacctccg < 2:3733596‑M2/148‑15 (MQ=255) cATACGTTAAATCAGTTGTTAAATAACATTGTACCGCATTTTCTTTCAACTCCATAGAATAATTTCTATTGCCTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGACTAGATGAGCTTAc > 1:2409620/1‑148 (MQ=255) tACGTTAAATCAGTTGTTAAATAACATTGTACCGCATTTTCTTTCAACTCCATAGAATAATTTTTATTTACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGAagaaaagacctccgaa > 1:737330‑M2/1‑132 (MQ=255) tACGTTAAATCAGTTGTTAAATAACATTGTACCGCATTTTCTTTCAACTCCATAGAATAATTTCTATTGACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGACTAGATGAGCTTACGt > 1:1316771/1‑148 (MQ=255) aCGTTAAATCAGTTGTTAAATAACATTGTACCGCATTTTCTTTCAACTCCATAGAATAATTTTTATTTACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGAagaaaagacctccgaat < 2:4604684‑M2/148‑18 (MQ=255) gttAAATAACATTGTACCGCATTTTCTTTCAACTCCATAGAATAATTTTTATTTACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGAagaaaagacctccgaatggaaagtcaacgaa < 1:3841584‑M2/148‑32 (MQ=255) tAAATAACATTGTACCGCATTTTCTTTCAACTCCATAGAATAATTTTTATTTACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGAagaaaagacctccgaatggaaagtcaacgaaaa > 1:374539‑M2/1‑115 (MQ=255) tAAATAACATTGTACCGCATTTTCTTTCAACTCCATAGAATAATTTCTATTGACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGACTAGATGAGCTTACGTTGTGCAGTTTAGCAAGa < 2:1568573/148‑1 (MQ=255) aaaTAACATTGTACCGCATTTTCTTTCAACTCCATAGAATAATTTCTATTGACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGACTAGATGAGCTTACGTTGTGCAGTTTAGCAAGAt > 2:1606745/1‑148 (MQ=255) aTAACATTGTACCGCATTTTCTTTCAACTCCATAGAATAGTTTCTATTGACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAGCCTGACTAGATGAGCTTACGTTGTGCAGTTTAGCAAGATAg < 2:1725580/148‑1 (MQ=255) aTAACATTGTACCGCATTTTCTTTCAACTCCATAGAATAATTTTTATTTACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGAagaaaagacctccgaatggaaagtcaacgaaaaact > 2:2080371‑M2/1‑112 (MQ=255) aTAACATTGTACCGCATTTTCTTTCAACTCCATAGAATAATTTCTATTGACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGACTAGATGAGCTTACGTTGTGCAGTTTAGCAAGATAg > 1:4579337/1‑148 (MQ=255) tAACATTGTACCGCATTTTCTTTCAACTCCATAGAATAATTTTTATTTACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGAagaaaagacctccgaatggaaagtcaacgaaaaacta > 1:4407404‑M2/1‑111 (MQ=255) aaCATTGTACCGCATTTTCTTTCAACTCCATAGAATAATTTCTATTGACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGACTAGATGAGCTTACGTTGTGCAGTTTAGCAAGATAGGt < 1:2110781/148‑1 (MQ=255) aCATTGTACCGCATTTTCTTTCAACTCCATAGAATAATTTTTATTTACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGAagaaaagacctccgaatggaaagtcaacgaaaaactaga < 1:1662518‑M2/148‑40 (MQ=255) gTACCGCATTTTCTTTCAACTCCATAGAATAATTTCTATTGACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGACTAGATGAGCTTACGTTGTGCAGTTTAGCAAGATAGGTagagag < 1:2905166/148‑1 (MQ=255) aCCGCATTTTCTTTCAACTCCATAGAATAATTTCTATTGACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGACTAGATGAGCTTACGTTGTGCAGTTTAGCAAGATAGGTAGAGAGcc > 1:3062609/1‑148 (MQ=255) ccGCATTTTCTTTCAACTCCATAGAATAATTTTTATTGACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAATGTCTAACCTGACTAGATGAGCTTACGTTGTGCAGTTTAGCAAGATAGGTAGAGAGCCt < 2:1763243/148‑1 (MQ=2) gCATTTTCTTTCAACTCCATAGAATAATTTTTATTTACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGAagaaaagacctccgaatggaaagtcaacgaaaaactagacacggagtta > 2:1942152‑M2/1‑99 (MQ=255) tttctttcAACTCCATAGAATAATTTTTATTTACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGAagaaaagacctccgaatggaaagtcaacgaaaaactagacacggagttaagag > 2:343307‑M2/1‑95 (MQ=255) tttctttcAACTCCATAGAATAATTTCTATTGACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGACTAGATGAGCTTACGTTGTGCAGTTTAGCAAGATAGGTAGAGAGCCTCCCTGc > 2:3981032/1‑148 (MQ=255) tttctttcAACTCCATAGAATAATTTCTATTGACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGACTAGATGAGCTTACGTTGTGCAGTTTAGCAAGATAGGTAGAGAGCCTCCCTGc > 1:2968196/1‑148 (MQ=255) tctttcAACTCCATAGAATAATTTCTATTGACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGACTAGATGAGCTTACGTTGTGCAGTTTAGCAAGATAGGTAGAGAGCCTCCCTGCCa < 2:1387568/148‑1 (MQ=255) ctttcAACTCCATAGAATAATTTCTATTGACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGACTAGATGAGCTTACGTTGTGCAGTTTAGCAAGATAGGTAGAGAGCCTCCCTGCCAg < 2:2352669/148‑1 (MQ=255) tttcAACTCCATAGAATAATTTTTATTTACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGAagaaaagacctccgaatggaaagtcaacgaaaaactagacacggagttaagagaatt < 1:4612598‑M2/148‑58 (MQ=255) tttcAACTCCATAGAATAATTTCTATTGACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGACTAGATGAGCTTACGTTGTGCAGTTTAGCAAGATAGGTAGAGAGCCTCCCTGCCAGa < 2:3895048/148‑1 (MQ=255) ttcAACTCCATAGAATAATTTCTATTGACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGACTAGATGAGCTTACGTTGTGCAGTTTAGCAAGATAGGTAGAGAGCCTCCCTGCCAGat > 1:1805213/1‑148 (MQ=255) ttcAACTCCATAGAATAATTTCTATTGACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGACTAGATGAGCTTACGTTGTGCAGTTTAGCAAGATAGGTAGAGAGCCTCCCTGCCAGat < 1:4494387/148‑1 (MQ=255) aaCTCCATAGAATAATTTTTATTTACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGAagaaaagacctccgaatggaaagtcaacgaaaaactagacacggagttaagagaatttaag > 1:3176809‑M2/1‑87 (MQ=255) cTCCATAGAATAATTTCTATTGACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGACTAGATGAGCTTACGTTGTGCAGTTTAGCAAGATAGGTAGAGAGCCTCCCTGCCAGataaata < 2:4705862/148‑1 (MQ=255) cTCCATAGAATAATTTCTATTGACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGACTAGATGAGCTTACGTTGTGCAGTTTAGCAAGATAGGTAGAGAGCCTCCCTGCCAGataaata > 1:1449121/1‑148 (MQ=255) tCCATAGAATAATTTCTATTGACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGACTAGATGAGCTTACGTTGTGCAGTTTAGCAAGATAGGTAGAGAGCCTCCCTGCCAGataaataa < 1:786591/148‑1 (MQ=255) cATAGAATAATTTTTATTTACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGAagaaaagacctccgaatggaaagtcaacgaaaaactagacacggagttaagagaatttaagaatta < 2:2232318‑M2/148‑67 (MQ=255) cATAGAATAATTTTTATTTACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGAagaaaagacctccgaatggaaagtcaacgaaaaactagacacggagttaagagaatttaagaatta > 1:3687707‑M2/1‑82 (MQ=255) cATAGAATAATTTCTATTGACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGACTAGATGAGCTTACGTTGTGCAGTTTAGCAAGATAGGTAGAGAGCCTCCCTGCCAGATAAATAATc > 2:1050707/1‑148 (MQ=255) aTAGAATAATTTTTATTTACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGAagaaaagacctccgaatggaaagtcaacgaaaaactagacacggagttaagagaatttaagaattat > 2:3144249‑M2/1‑81 (MQ=255) aTAGAATAATTTCTATTGACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGACTAGATGAGCTTACGTTGTGCAGTTTAGCAAGATAGGTAGAGAGCCTCCCTGCCAGATAAATAATCt > 1:1980212/1‑148 (MQ=255) tAGAATAATTTCTATTGACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGACTAGATGAGCTTACGTTGTGCAGTTTAGCAAGATAGGTAGAGAGCCTCCCTGCCAGATAAATAATCtt < 1:3975026/148‑1 (MQ=255) aataatTTTTATTTACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGAagaaaagacctccgaatggaaagtcaacgaaaaactagacacggagttaagagaatttaagaattatattt > 2:2020751‑M2/1‑77 (MQ=255) aataatTTCTATTGACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGACTAGATGAGCTTACGTTGTGCAGTTTAGCAAGATAGGTAGAGAGCCTCCCTGCCAGATAAATAATCTTGaa < 1:3333302/148‑1 (MQ=255) taatTTTTATTTACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGAagaaaagacctccgaatggaaagtcaacgaaaaactagacacggagttaagagaatttaagaattatattttt > 2:4166890‑M2/1‑75 (MQ=255) taatTTCTATTGACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGACTAGATGAGCTTACGTTGTGCAGTTTAGCAAGATAGGTAGAGAGCCTCCCTGCCAGATAAATAATCTTGAATa < 2:2679576/148‑1 (MQ=255) tttatTTACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGAagaaaagacctccgaatggaaagtcaacgaaaaactagacacggagttaagagaatttaagaattatatttttcaaag > 1:3627234‑M2/3‑70 (MQ=255) aTTGACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGACTAGATGAGCTTACGTTGTGCAGTTTAGCAAGATAGGTAGAGAGCCTCCCTGCCAGATAAATAATCTTGAATAACGCgttg > 1:2257879/1‑148 (MQ=255) tGACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGACTAGATGAGCTTACGTTGTGCAGTTTAGCAAGATAGGTAGAGAGCCTCCCTGCCAGATAAATAATCTTGAATAACGCgttgtt < 1:2336963/148‑1 (MQ=255) tacTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGAagaaaagacctccgaatggaaagtcaacgaaaaactagacacggagttaagagaatttaagaattatatttttcaaagtctttt > 2:3364261‑M2/2‑64 (MQ=255) aCTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGACTAGATGAGCTTACGTTGTGCAGTTTAGCAAGATAGGTAGAGAGCCTCCCTGCCAGATAAATAATCTTGAATAACGCGTTGtttt > 2:149557/1‑148 (MQ=255) cTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGAagaaaagacctccgaatggaaagtcaacgaaaaactagacacggagttaagagaatttaagaattatatttttcaaagtcttttgg > 2:686992‑M2/1‑62 (MQ=255) ttGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGAagaaaagacctccgaatggaaagtcaacgaaaaactagacacggagttaagagaatttaagaattatatttttcaaagtcttttggag < 2:3595367‑M2/148‑89 (MQ=255) ttGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGAagaaaagacctccgaatggaaagtcaacgaaaaactagacacggagttaagagaatttaagaattatatttttcaaagtcttttggag < 1:2474340‑M2/148‑89 (MQ=255) gTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGAagaaaagacctccgaatggaaagtcaacgaaaaactagacacggagttaagagaatttaagaattatatttttcaaagtcttttggagacttg < 2:64239‑M2/148‑94 (MQ=255) tGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGAagaaaagacctccgaatggaaagtcaacgaaaaactagacacggagttaagagaatttaagaattatatttttcaaagtcttttggagacttgt < 2:444791‑M2/148‑95 (MQ=255) tGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGACTAGATGAGCTTACGTTGTGCAGTTTAGCAAGATAGGTAGAGAGCCTCCCTGCCAGATAAATAATCTTGAATAACGCGTTGTTTTAATTCTATg > 1:1756561/1‑148 (MQ=255) aGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGAagaaaagacctccgaatggaaagtcaacgaaaaactagacacggagttaagagaatttaagaattatatttttcaaagtcttttggagacttgtaa < 1:2739424‑M2/148‑97 (MQ=255) gCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGAagaaaagacctccgaatggaaagtcaacgaaaaactagacacggagttaagagaatttaagaattatatttttcaaagtcttttggagacttgtaat > 1:4229272‑M2/1‑51 (MQ=255) tGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGAagaaaagacctccgaatgaaaaaaaaaagaaaaactagacacggagttaagagaatttaagaattatatttttcaaagtcttttggagacttgtaatca > 2:4646382‑M2/1‑49 (MQ=255) tAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGACTAGATGAGCTTACGTTGTGCAGTTTAGCAAGATAGGTAGAGAGCCTCCCTGCCAGATAAATAATCTTGAATAACGCGTTGTTTTAATTCTATGGAATAtt > 1:4322725/1‑148 (MQ=255) aGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGAagaaaagacctccgaatggaaagtcaacgaaaaactagacacggagttaagagaatttaagaattatatttttcaaagtcttttggagacttgtaatcaaga > 1:1000855‑M2/1‑46 (MQ=255) ggAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGAagaaaagacctccgaatggaaagtcaacgaaaaactagacacggagttaagagaatttaagaattatatttttcaaagtcttttggagacttgtaatcaagac > 2:2586118‑M2/1‑45 (MQ=255) gAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGACTAGATGAGCTTACGTTGTGCAGTTTAGCAAGATAGGTAGAGAGCCTCCCTGCCAGATAAATAATCTTGAATAAGGCGTTGTTTTAATTCTATGGAATATTTGa > 2:4246506/1‑148 (MQ=255) aaGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGAagaaaagacctccgaatggaaagtcaacgaaaaactagacacggagttaagagaatttaagaattatatttttcaaagtcttttggagacttgtaatcaagacct > 2:3536727‑M2/1‑43 (MQ=255) aaGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGACTAGATGAGCTTACGTTGTGCAGTTTAGCAAGATAGGTAGAGAGCCTCCCTGCCAGATAAATAATCTTGAATAACGCGTTGTTTTAATTCTATGGAATATTTGAc < 1:1553174/148‑1 (MQ=255) gTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGAagaaaagacctccgaatggaaagtcaacgaaaaactagacacggagttaagagaatttaagaattatatttttcaaagtcttttggagacttgtaatcaagacctga < 1:2048725‑M2/148‑108 (MQ=255) tCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGAagaaaagacctccgaatggaaagtcaacgaaaaactagacacggagttaagagaatttaagaattatatttttcaaagtcttttggagacttgtaatcaagacctgaa > 2:3841487‑M2/1‑40 (MQ=255) ctctGCTCGATAATTGCGAATCCAGCGTCTAACCTGAagaaaagacctccgaatggaaagtcaacgaaaaactagacacggagttaagagaatttaagaattatatttttcaaagtcttttggagacttgtaatcaagacctgaatgc > 1:284995‑M2/1‑37 (MQ=255) ctctGCTCGATAATTGCGAATCCAGCGTCTAACCTGACTAGATGAGCTTACGTTGTGCAGTTTAGCAAGATAGGTAGAGAGCCTCCCTGCCAGATAAATAATCTTGAATAACGCGTTGTTTTAATTCTATGGAATATTTGACCATAAg < 2:216413/148‑1 (MQ=255) tctGCTCGATAATTGCGAATCCAGCGTCTAACCTGAagaaaagacctccgaatggaaagtcaacgaaaaactagacacggagttaagagaatttaagaattatatttttcaaagtcttttggagacttgtaatcaagacctgaatgca < 2:294444‑M2/148‑113 (MQ=255) tctGCTCGATAATTGCGAATCCAGCGTCTAACCTGAagaaaagacctccgaatggaaagtcaacgaaaaactagacacggagttaagagaatttaagaattatatttttcaaagtcttttggagacttgtaatcaagacctgaatgca > 2:3303921‑M2/1‑36 (MQ=255) ctGCTCGATAATTGCGAATCCAGCGTCTAACCTGACTAGATGAGCTTACGTTGTGCAGTTTAGCAAGATAGGTAGAGAGCCTCCCTGCCAGATAAATAATCTTGAATAACGCGTTGTTTTAATTCTATGGAATATTTGACCATAAGaa < 1:3923773/148‑1 (MQ=255) tGCTCGATAATTGCGAATCCAGCGTCTAACCTGAagaaaagacctccgaatggaaagtcaacgaaaaactagacacggagttaagagaatttaagaattatatttttcaaagtcttttggagacttgtaatcaagacctgaatgcatc < 2:4356230‑M2/148‑115 (MQ=255) gCTCGATAATTGCGAATCCAGCGTCTAACCTGAagaaaagacctccgaatggaaagtcaacgaaaaactagacacggagttaagagaatttaagaattatatttttcaaagtcttttggagacttgtaatcaagacctgaatgcatcc > 2:252101‑M2/1‑33 (MQ=255) tCGATAATTGCGAATCCAGCGTCTAACCTGAagaaaagacctccgaatggaaagtcaacgaaaaactagacacggagttaagagaatttaagaattatatttttcaaagtcttttggagacttgtaatcaagacctgaatgcatcctt > 2:1151520‑M2/1‑31 (MQ=255) gATAATTGCGAATCCAGCGTCTAACCTGAagaaaagacctccgaatggaaagtcaacgaaaaactagacacggagttaagagaatttaagaattatatttttcaaagtcttttggagacttgtaatcaagacctgaatgcatcctttt < 1:108936‑M2/148‑120 (MQ=255) aTAATTGCGAATCCAGCGTCTAACCTGACTAGATGAGCTTACGTTGTGCAGTTTAGCAAGATAGGTAGAGAGCCTCCCTGCCAGATAAATAATCTTGAATAACGCGTTGTTTTAATTCTATGGAATATTTGACCATAAGAAAAGACCt < 1:3471270/148‑1 (MQ=255) aTAATTGCGAATCCAGCGTCTAACCTGACTAGATGAGCTTACGTTGTGCAGTTTAGCAAGATAGGTAGAGAGCCTCCCTGCCAGATAAATAATCTTGAATAACGCGTTGTTTTAATTCTATGGAATATTTGACCATAAGAAAAGACCt < 1:881037/148‑1 (MQ=255) ttGCGAATCCAGCGTCTAACCTGAagaaaagacctccgaatggaaagtcaacgaaaaactagacacggagttaagagaatttaagaattatatttttcaaagtcttttggagacttgtaatcaagacctgaatgcatcctttttgtat > 2:903663‑M2/1‑24 (MQ=255) gCGAATCCAGCGTCTAACCTGAagaaaagacctccgaatggaaagtcaacgaaaaactagacacggagttaagagaatttaagaattatatttttcaaagtcttttggagacttgtaatcaagacctgaatgcatcctttttgtattg > 2:1821830‑M2/1‑22 (MQ=255) aaTCCAGCGTCTAACCTGACTAGATGAGCTTACGTTGTGCAGTTTAGCAAGATAGGTAGAGAGCCTCCCTGCCAGATAAATAATCTTGAATAACGCGTTGTTTTAATTCTATGGAATATTTGACCATAAGAAAAGACCTCCGAAatat < 2:3078726/148‑1 (MQ=255) aaTCCAGCGTCTAACCTGACTAGATGAGCTTACGTTGTGCAGTTTAGCAAGATAGGTAGAGAGCCTCCCTGCCAGATAAATAATCTTGAATAACGCGTTGTTTTAATTCTATGGAATATTTGACCATAAGAAAAGACCTCCGAAatat > 2:3772740/1‑148 (MQ=255) aTCCAGCGTCTAACCTGAagaaaagacctccgaatggaaagtcaacgaaaaactagacacggagttaagagaatttaagaattatatttttcaaagtcttttggagacttgtaatcaagacctgaatgcatcctttttgtattgtaat > 2:2442869‑M2/1‑18 (MQ=255) aTCCAGCGTCTAACCTGACTAGATGAGCTTACGTTGTGCAGTTTAGCAAGATAGGTAGAGAGCCTCCCTGCCAGATAAATAATCTTGAATAACGCGTTGTTTTAATTCTATGGAATATTTGACCATAAGAAAAGACCTCCGAAAtata > 1:4080020/1‑148 (MQ=255) ccAGCGTCTAACCTGACTAGATGAGCTTACGTTGTGCAGTTTAGCAAGATAGGTAGAGAGCCTCCCTGCCAGATAAATAATCTTGAATAACGCGTTGTTTTAATTCTATGGAATATTTGACCATAAGAAAAGACCTCCGAAATATAGa > 1:548821/1‑148 (MQ=255) aGCGTCTAACCTGAagaaaagacctccgaatggaaagtcaacgaaaaactagacacggagttaagagaatttaagaattatatttttcaaagtcttttggagacttgtaatcaagacctgaatgcatcctttttgtattgtaataggt > 1:2605118‑M2/1‑14 (MQ=255) gCGTCTAACCTGAagaaaagacctccgaatggaaagtcaacgaaaaactagacacggagttaagagaatttaagaattatatttttcaaagtcttttggagacttgtaatcaagacctgaatgcatcctttttgtattgtaataggtc < 2:544710‑M2/148‑136 (MQ=255) cTAACCTGACTAGATGAGCTTACGTTGTGCAGTTTAGCAAGATAGGTAGAGAGCCTCCCTGCCAGATAAATAATCTTGAATAACGCGTTGTTTTAATTCTATGGAATATTTGACCATAAGAAAAGACCTCCGAAATATAGATTTGaaa > 2:4095322/1‑148 (MQ=255) cTAACCTGACTAGATGAGCTTACGTTGTGCAGTTTAGCAAGATAGGTAGAGAGCCTCCCTGCCAGATAAATAATCTTGAATAACGCGTTGTTTTAATTCTATGGAATATTTGACCATAAGAAAAGACCTCCGAAATATAGATTTGaaa > 2:4526633/1‑148 (MQ=255) cTAACCTGACTAGATGAGCTTACGTTGTGCAGTTTAGCAAGATAGGTAGAGAGCCTCCCTGCCAGATAAATAATCTTGAATAACGCGTTGTTTTAATTCTATGGAATATTTGACCATAAGAAAAGACCTCCGAAATATAGATTTGaaa > 1:2210562/1‑148 (MQ=255) cTAACCTGACTAGATGAGCTTACGTTGTGCAGTTTAGCAAGATAGGTAGAGAGCCTCCCTGCCAGATAAATAATCTTGAATAACGCGTTGTTTTAATTCTATGGAATATTTGACCATAAGAAAAGACCTCCGAAATATAGATTTGaaa > 2:3685116/1‑148 (MQ=255) aaCCTGAagaaaagacctccgaatggaaagtcaacgaaaaactagacacggagttaagagaatttaagaattatatttttcaaagtcttttggagacttgtaatcaagacctgaatgcatcctttttgtattgtaataggtctcaatg < 2:792689‑M2/148‑142 (MQ=255) aaCCTGACTAGATGAGCTTACGTTGTGCAGTTTAGCAAGATAGGTAGAGAGCCTCCCTGCCAGATAAATAATCTTGAATAACGCGTTGTTTTAATTCTATGGAATATTTGACCATAAGAAAAGACCTCCGAAATATAGATTTGAAAAg < 1:2523522/148‑1 (MQ=255) gaagaaaagacctccgaatggaaagtcaacgaaaaactagacacggagttaagagaatttaagaattatatttttcaaagtcttttggagacttgtaatcaagacctgaatgcatcctttttgtattgtaataggtctcaatgtactt < 2:2834900‑M2/148‑147 (MQ=255) gACTAGATGAGCTTACGTTGTGCAGTTTAGCAAGATAGGTAGAGAGCCTCCCTGCCAGATAAATAATCTTGAATAACGCGTTGTTTTAATTCTATGGAATATTTGACCATAAGAAAAGACCTCCGAAATATAGATTTGAAAAGTCtat < 1:4678735/148‑1 (MQ=255) aCTAGATGAGCTTACGTTGTGCAGTTTAGCAAGATAGGTAGAGAGCCTCCCTGCCAGATAAATAATCTTGAATAACGCGTTGTTTTAATTCTATGGAATATTTGACCATAAGAAAAGACCTCCGAAATATAGATTTGAAAAGTCtata > 2:1000944/1‑148 (MQ=255) | TCTTGCCACAGCTTCATACGTTAAATCAGTTGTTAAATAACATTGTACCGCATTTTCTTTCAACTCCATAGAATAATTTCTATTGACTTTGGAGTGAGCTGTAGGAAGTCCCTCTGCTCGATAATTGCGAATCCAGCGTCTAACCTGACTAGATGAGCTTACGTTGTGCAGTTTAGCAAGATAGGTAGAGAGCCTCCCTGCCAGATAAATAATCTTGAATAACGCGTTGTTTTAATTCTATGGAATATTTGACCATAAGAAAAGACCTCCGAAATATAGATTTGAAAAGTCTATAT > CP043523/1998440‑1998735 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |