New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP043523 = 1895788NA (NA)618 (1.170) 239/292 0.0 49.9% intergenic (+17/+38) FTN78_chr1944/FTN78_chr1945 Mobile element protein/hypothetical protein
?CP043523 = 2060261 624 (1.170)coding (700/1308 nt) FTN78_chr2133 D‑alanyl‑D‑alanine carboxypeptidase

Only 100 of 1279 total aligned reads displayed.

CTAAAACAACCGTAATGATTCTAAAACCGTTTTGATTTGTTGTTCCAGCAAAACAGTCAATTTGAAAACTTGTTGAACCTGTTTTCAAGCCATCTACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAGGTCATCTTTGCTTCATTGCCGGTATCAAAAGGAATTTCTGTTTTTTTAGTGATTTGAAGAATTTCTGGGAAATCTTGAATAAGATGATAACTGAGTGTTGCTACGGCCTTTGCGCTCATTGTGTTTGTTGCTGAAGCACCAGACCC  >  CP043523/2060114‑2060408
                                                                                                                                                   |                                                                                                                                                   
cTAAAACAACCGTAATGATTCTAAAACCGTTTTGATTTGTTGTTCCAGCAAAACAGTCAATTTGAAAACTTGTTGAACCTGTTTTCAAGCCATCTACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAA                                                                                                                                                     <  1:207605‑M2/148‑1 (MQ=255)
   aaaCAACTGTAATGATTCTAAAACCGTTTTGATTTGTTGTTCCAGCAAAACAGTCAATTTGAAAACTTGTTGAACCTGTTTTCAAGCCATCTACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAGGt                                                                                                                                                  <  1:395601/148‑1 (MQ=255)
   aaaCAACCGTAATGATTCTAAAGCCGTTTTGATTTGTTGTTCCAGCAAAACAGTCAATTTGAAAACTTGTTGAACCTGTTTTCAAGCCATCCACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAccc                                                                                                                                                  <  1:2301184‑M2/148‑4 (MQ=255)
   aaaCAACCGTAATGATTCTAAAACCGTTTTGATTTGTTGTTCCAGCAAAACAGTCAATTTGAAAACTTGTTGAACCTGTTTTCAAGCCATCTACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAGGt                                                                                                                                                  >  1:1251697/1‑148 (MQ=255)
     acaacCGTAATGATTCTAAAGCCGTTTTGATTTGTTGTTCCAGCAAAACAGTCAATTTGAAAACTTGTTGAACCTGTTTTCAAGCCATCCACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAcccga                                                                                                                                                >  1:2178143‑M2/1‑143 (MQ=255)
     acaacCGTAATGATTCTAAAACCGTTTTGATTTGTTGTTCCAGCAAAACAGTCAATTTGAAAACTTGTTGAACCTGTTTTCAAGCCATCTACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAGGTCa                                                                                                                                                >  2:866077/1‑148 (MQ=255)
     acaacCGTAATGATTCTAAAACCGTTTTGATTTGTTGTTCCAGCAAAACAGTCAATTTGAAAACTTGTTGAACCTGTTTTCAAGCCATCTACACCAGTTCATGAAATAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAGGTCa                                                                                                                                                <  2:3800241/148‑1 (MQ=255)
       aacCGTAATGATTCTAAAGCCGTTTTGATTTGTTGTTCCAGCAAAACAGTCAATTTGAAAACTTGTTGAACCTGTTTTCAAGCCATCCACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAcccgaat                                                                                                                                              <  2:1888806‑M2/148‑8 (MQ=255)
           gTAATGATTCTAAAGCCGTTTTGATTTGTTGTTCCAGCAAAACAGTCAATTTGAAAACTTGTTGAACCTGTTTTCAAGCCATCCACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAcccgaattgct                                                                                                                                          <  2:4377182‑M2/148‑12 (MQ=255)
            tAATGATTCTAAAGCCGTTTTGATTTGTTGTTCCAGCAAAACAGTCAATTTGAAAACTTGTTGAACCTGTTTTCAAGCCATCCACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAcccgaattgcta                                                                                                                                         >  1:821245‑M2/1‑136 (MQ=255)
            tAATGATTCTAAAACCGTTTTGATTTGTTGTTCCAGCAAAACAGTCAATTTGAAAACTTGTTGAACCTGTTTTCAAGCCATCTACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAGGTCATCTTTGc                                                                                                                                         <  2:3633351/148‑1 (MQ=255)
             aaTGATTCTAAAACCGTTTTGATTTGTTGTTCCAGCAAAACAGTCAATTTGAAAACTTGTTGAACCTGTTTTCAAGCCATCTACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAGGTCATCTTTGCt                                                                                                                                        >  2:4232948/1‑148 (MQ=255)
              aTGATTCTAAAGCCGTTTTGATTTGTTGTTCCAGCAAAACAGTCAATTTGAAAACTTGTTGAACCTGTTTTCAAGCCATCCACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAcccgaattgctagt                                                                                                                                       >  1:3017356‑M2/1‑134 (MQ=255)
              aTGATTCTAAAGCCGTTTTGATTTGTTGTTCCAGCAAAACAGTCAATTTGAAAACTTGTTGAACCTGTTTTCAAGCCATCCACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAcccgaattgctagt                                                                                                                                       <  2:2025826‑M2/148‑15 (MQ=255)
              aTGATTCTAAAACCGTTTTGATTTGTTGTTCCAGCAAAACAGTCAATTTGAAAACTTGTTGAACCTGTTTTCAAGCCATCTACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAGGTCATCTTTGCtt                                                                                                                                       >  1:1471036/1‑148 (MQ=255)
              aTGATTCTAAAACCGTTTTGATTTGTTGTTCCAGCAAAACAGTCAATTTGAAAACTTGTTGAACCTGTTTTCAAGCCATCTACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAGGTCATCTTTGCtt                                                                                                                                       <  1:1023498/148‑1 (MQ=255)
               tGATTCTAAAACCGTTTTGATTTGTTGTTCCAGCAAAACAGTCAATTTGAAAACTTGTTGAACCCGTTTTCAAGCCATCTACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAGGTCATCTTTGCTTc                                                                                                                                      <  1:745801/148‑1 (MQ=255)
                gATTCTAAAGCCGTTTTGATTTGTTGTTCCAGCAAAACAGTCAATTTGAAGACTTGTTGAACCTGTTTTCACGCCATCCACACCAGTCCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAcccgaattgctagcta                                                                                                                                     <  2:2808006‑M2/148‑17 (MQ=255)
                 aTTCTAAAACCGTTTTGATTTGTTGTTCCAGCAAAACAGTCAATTTGAAAACTTGTTGAACCTGTTTTCAAGCCATCTACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAGGTCATCTTTGCTTCAt                                                                                                                                    >  1:4030282/1‑148 (MQ=255)
                   tCTAAAGCCGTTTTGATTTGTTGTTCCAGCAAAACAGTCAATTTGAAAACTTGTTGAACCTGTTTTCAAGCCATCCACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAcccgaattgctagttgatt                                                                                                                                  >  1:1866553‑M2/1‑129 (MQ=255)
                    cTAAAACCGTTTTGATTTGTTGTTCCAGCAAAACAGTCAATTTGAAAACTTGTTGAACCTGTTTTCAAGCCATCTACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAGGTCATCTTTGCTTCATTGc                                                                                                                                 >  2:3137248/1‑148 (MQ=255)
                       aaaCCGTTTTGATTTGTTGTTCCAGCAAAACAGTCAATTTGAAAACTTGTTGAACCTGTTTTCAAGCCATCTACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAGGTCATCTTTGCTTCATTGCCgg                                                                                                                              <  1:158307/148‑1 (MQ=255)
                         aCCGTTTTGATTTGTTGTTCCAGCAAAACAGTCAATTTGAAAACTTGTTGAACCTGTTTTCAAGCCATCTACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAGGTCATCTTTGCTTCATTGCCGGTa                                                                                                                            >  1:338179/1‑148 (MQ=255)
                             ttttGATTTGTTGTTCCAGCAAAACAGTCAATTTGAAAACTTGTTGAACCTGTTTTCAAGCCATCCACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAcccgaattgctagttgattatttagccat                                                                                                                        <  2:3699661‑M2/148‑30 (MQ=255)
                             ttttGATTTGTTGTTCCAGCAAAACAGTCAATTTGAAAACTTGTTGAACCTGTTTTCAAGCCATCCACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAcccgaattgctagttgattatttagccat                                                                                                                        <  2:705498‑M2/148‑30 (MQ=255)
                               ttGATTTGTTGTTCCAGCAAAACAGTCAATTTGAAAACTTGTTGAACCTGTTTTCAAGCCATCTACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAGGTCATCTTTGCTTCATTGCCGGTATCaaaa                                                                                                                      <  1:1681702/148‑1 (MQ=255)
                                 gATTTGTTGTTCCAGCAAAACAGTCAATTTGAAAACTTGTTGAACCTGTTTTCAAGCCATCCACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAcccgaattgctagttgattatttagccatgact                                                                                                                    >  2:2864937‑M2/1‑115 (MQ=255)
                                  aTTTGTTGTTCCAGCAAAACAGTCAATTTGAAAACTTGTTGAACCTGTTTTCAAGCCATCCACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAcccgaattgctagttgattatttagccatgactt                                                                                                                   >  2:2666946‑M2/1‑114 (MQ=255)
                                    ttgttgTTCCAGCAAAACAGTCAATTTGAAAACTTGTTGAACCTGTTTTCAAGCCATCCACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAcccgaattgctagttgattatttagccatgacttga                                                                                                                 >  2:4618905‑M2/1‑112 (MQ=255)
                                    ttgttgTTCAAGCAAAACAGTCAATTTGAAAACTTGTTGAACCTGTTTTCAAGCCATCCACACCATTTCTTGAATTTGAAAAACCACTAAGCATTTTATTGTTATTAGTTAAcccggatttctagttcattatttagccattacttta                                                                                                                 <  1:3604949‑M2/148‑37 (MQ=255)
                                     tgttgtTCCAGCAAAACAGTCAATTTGAAAACTTGTTGAACCTGTTTTCAAGCCATCCACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAcccgaattgctagttgattatttagccatgacttgac                                                                                                                <  1:3486164‑M2/148‑38 (MQ=255)
                                      gttgttCCAGCAAAACAGTCAATTTGAAAACTTGTTGAACCTGTTTTCAAGCCATCCACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAcccgaattgctagttgattatttagccatgacttgaca                                                                                                               <  1:2861115‑M2/148‑39 (MQ=255)
                                      gttgttCCAGCAAAACAGTCAATTTGAAAACTTGTTGAACCTGTTTTCAAGCCATCCACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAcccgaattgctagttgattatttagccatgacttgaca                                                                                                               >  2:2192873‑M2/1‑110 (MQ=255)
                                       ttgttCCAGCAAAACAGTCAATTTGAAAACTTGTTGAACCTGTTTTCAAGCCATCTACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAGGTCATCTTTGCTTCATTGCCGGTATCAAAAGGAATTTc                                                                                                              <  1:296674/148‑1 (MQ=255)
                                       ttgttCCAGCAAAACAGTCAATTTGAAAACTTGTTGAACCTGTTTTCAAGCCATCTACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAGGTCATCTTTGCTTCATTGCCGGTATCAAAAGGAATTTc                                                                                                              >  2:2391477/1‑148 (MQ=255)
                                         gttCCAGCAAAACAGTCAATTTGAAAACTTGTTGAACCTGTTTTCAAGCCATCCACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAcccgaattgctagttgattatttagccatgacttgacaccc                                                                                                            >  2:1324339‑M2/1‑107 (MQ=255)
                                          ttCCAGCAAAACAGTCAATTTGAAAACTTGTTGAACCTGTTTTCAAGCCATCCACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAcccgaattgctagttgattatttagccatgacttgacacccg                                                                                                           >  2:3006954‑M2/1‑106 (MQ=255)
                                            ccAGCAAAACAGTCAATTTGAAAACTTGTTGAACCTGTTTTCAAGCCATCTACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAGGTCATCTTTGCTTCATTGCCGGTATCAAAAGGAATTTCTGttt                                                                                                         <  2:4323737/148‑1 (MQ=255)
                                            ccAGCAAAACAGTCAATTTGAAAACTTGTTGAACCTGTTTTCAAGCCATCCACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAcccgaattgctagttgattatttagccatgacttgacacccgat                                                                                                         >  2:3861578‑M2/1‑104 (MQ=255)
                                              aGCAAAACAGTCAATTTGAAAACTTGTTGAACCTGTTTTCAAGCCATCTACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAGGTCATCTTTGCTTCATTGCCGGTATCAAAAGGAATTTCTGttttt                                                                                                       <  1:3548248/148‑1 (MQ=255)
                                              aGCAAAACAGTCAATTTGAAAACTTGTTGAACCTGTTTTCAAGCCATCCACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAcccgaattgctagttgattatttagccatgacttgacacccgatag                                                                                                       >  1:4332996‑M2/1‑102 (MQ=255)
                                               gCAAAACAGTCAATTTGAAAACTTGTTGAACCTGTTTTCAAGCCATCCACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTTGTATTAGTTAAcccgaattgctagttgattatttagccatgacttgacacccgataga                                                                                                      <  1:483800‑M2/148‑48 (MQ=255)
                                                cAAAACAGTCAATTTGAAAACTTGTTGAACCTGTTTTCAAGCCATCCACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAcccgaattgctagttgattatttagccatgacttgacacccgatagaa                                                                                                     <  1:19319‑M2/148‑49 (MQ=255)
                                                 aaaaCAGTCAATTTGAAAACTTGTTGAACCTGTTTTCAAGCCATCCACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAcccgaattgctagttgattatttagccatgacttgacacccgatagaat                                                                                                    >  1:1358216‑M2/1‑99 (MQ=255)
                                                     cAGTCAATTTGAAAACTTGTTGAACCTGTTTTCAAGCCATCTACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAGGTCATCTTTGCTTCATTGCCGGTATCAAAAGGAATTTCTGTTTTTTTAGTGa                                                                                                <  1:237903/148‑1 (MQ=255)
                                                      aGTCAATTTGAAAACTTGTTGAACCTGTTTTCAAGCCATCTACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAGGTCATCTTTGCTTCATTGCCGGTATCAAAAGGAATTTCTGTTTTTTTAGTGAt                                                                                               >  1:1101850/1‑148 (MQ=255)
                                                        tCAATTTGAAAACTTGTTGAACCTGTTTTCAAGCCATCTACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAGGTCATCTTTGCTTCATTGCCGGTATCAAAAGGAATTTCTGTTTTTTTAGTGAttt                                                                                             >  1:2436800/1‑148 (MQ=255)
                                                         cAATTTGAAAACTTGTTGAACCTGTTTTCAAGCCATCTACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATCGGTATTAGTTAAGGTCATCTTTGCTCCATTGCCGGTATCAAAAGGAATCTCGGTTTGTTTAGTGATTTg                                                                                            >  1:3229362/1‑148 (MQ=255)
                                                            tttGAAAACTTGTTGAACCTGTTTTCAAGCCATCTACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAGGTCATCTTTGCTTCATTGCCGGTATCAAAAGGAATTTCTGTTTTTTTAGTGATTTgaag                                                                                         >  2:4153293/1‑148 (MQ=255)
                                                            ttcGAAAACTTGTTAAACCTGTTTTCAAGCCATCCACACCAGTGCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAcccgaattgctagttgattatttagccatgacttgacacccgatagaatatcttaaagtc                                                                                         >  2:2314460‑M2/1‑88 (MQ=255)
                                                                aaaaCTTGTTGAACCTGTTTTCAAGCCATCCACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAcccgaattgctagttgattatttagccatgacttgacacccgatagaatatcttaaagtctctg                                                                                     >  2:3389274‑M2/1‑84 (MQ=255)
                                                                 aaaCTTGTTGAACCTGTTTTCAAGCCATCCACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAcccgaattgctagttgattatttagccatgacttgacacccgatagaatatcttaaagtctctgg                                                                                    <  1:1521471‑M2/148‑66 (MQ=255)
                                                                 aaaCTTGTTGAACCTGTTTTCAAGCCATCCACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAcccgaattgctagttgattatttagccatgacttgacacccgatagaatatcttaaagtctctgg                                                                                    <  1:1742900‑M2/148‑66 (MQ=255)
                                                                  aaCTTGTTGAACCTGTTTTCAAGCCATCTACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAGGTCATCTTTGCTTCATTGCCGGTATCAAAAGGAATTTCTGTTTTTTTAGTGATTTGAAGAATTTc                                                                                   >  2:775859/1‑148 (MQ=255)
                                                                   aCTTGTTGAACCTGTTTTCAAGCCATCCACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAcccgaattgctagttgattatttagccatgacttgacacccgatagaatatcttaaagtctctggtt                                                                                  <  2:1194201‑M2/148‑68 (MQ=255)
                                                                     ttgttgAACCTGTTTTCAAGCCATCTACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAGGTCATCTTTGCTTCATTGCCGGTATCAAAAGGAATTTCTGTTTTTTTAGTGATTTGAAGAATTTCTgg                                                                                >  2:1669075/1‑148 (MQ=255)
                                                                      tgttgAACCTGTTTTCAAGCCATCTACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAGGTCATCTTTGCTTCATTGCCGGTATCAAAAGGAATTTCTGTTTTTTTAGTGATTTGAAGAATTTCTggg                                                                               <  1:3798444/148‑1 (MQ=255)
                                                                        ttgAACCTGTTTTCAAGCCATCTACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAGGTCATCTTTGCTTCATTGCCGGTATCAAAAGGAATTTCTGTTTTTTTAGTGATTTGAAGAATTTCTGGGaa                                                                             >  1:633020/1‑148 (MQ=255)
                                                                        ttgAACCTGTTTTCAAGCCATCTACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAGGTCATCTTTGCTTCATTGCCGGTATCAAAAGGAATTTCTGTTTTTTTAGTGATTTGAAGAATTTCTGGGaa                                                                             <  2:3444579/148‑1 (MQ=255)
                                                                            aCCTGTTTTCAAGCCATCCACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAcccgaattgctagttgattatttagccatgacttgacacccgatagaatatcttaaagtctctggttccagtgatt                                                                         >  1:940342‑M2/1‑72 (MQ=255)
                                                                              cTGTTTTCAAGCCATCTACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAGGTCATCTTTGCTTCATTGCCGGTATCAAAAGGAATTTCTGTTTTTTTAGTGATTTGAAGAATTTCTGGGAAATCTTg                                                                       >  1:4157676/1‑148 (MQ=255)
                                                                               tGTTTTCAAGCCATCCACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAcccgaattgctagttgattatttagccatgacttgacacccgatagaatatcttaaagtctctggttccagtgatttag                                                                      >  2:1040556‑M2/1‑69 (MQ=255)
                                                                                gTTTTCAAGCCATCCACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAcccgaattgctagttgattatttagccatgacttgacacccgatagaatatcttaaagtctctggttccagtgatttagc                                                                     <  1:1190387‑M2/148‑81 (MQ=255)
                                                                                gTTTTCAAGCCATCCACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAcccgaattgctagttgattatttagccatgacttgacacccgatagaatatcttaaagtctctggttccagtgatttagc                                                                     >  2:623957‑M2/1‑68 (MQ=255)
                                                                                  tttCAAGCCATCTACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAGGTCATCTTTGCTTCATTGCCGGTATCAAAAGGAATTTCTGTTTTTTTAGTGATTTGAAGAATTTCTGGGAAATCTTGAATa                                                                   <  2:564140/148‑1 (MQ=255)
                                                                                  tttCAAGCCATCTACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAGGTCATCTTTGCTTCATTGCCGGTATCAAAAGGAATTTCTGTTTTTTTAGTGATTTGAAGAATTTCTGGGAAATCTTGAATa                                                                   <  2:1752569/148‑1 (MQ=255)
                                                                                    tCAAGCCATCTACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAGGTCATCTTTGCTTCATTGCCGGTATCAAAAGGAATTTCTGTTTTTTTAGTGATTTGAAGAATTTCTGGGAAATCTTGAATAAg                                                                 >  2:3329196/1‑148 (MQ=255)
                                                                                    tCAAGCCATCCACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAcccgaattgctagttgattatttagccatgacttgacacccgatagaatatcttaaagtctctggttccagtgatttagctgat                                                                 >  1:3131569‑M2/1‑64 (MQ=255)
                                                                                        gCCATCCACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAcccgaattgctagttgattatttagccatgacttgacacccgatagaatatcttaaagtctctggttccagtgatttagctgatttta                                                             <  1:4558193‑M2/148‑89 (MQ=255)
                                                                                         ccATCCACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAcccgaattgctagttgattatttagccatgacttgacacccgatagaatatcttaaagtctctggttccagtgatttagctgattttaa                                                            <  1:4489016‑M2/148‑90 (MQ=255)
                                                                                          cATCCACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAcccgaattgctagttgattatttagccatgacttgacacccgatagaatatcttaaagtctctggttccagtgatttagctgattttaac                                                           <  2:1258290‑M2/148‑91 (MQ=255)
                                                                                           aTCTACACCAGTTCTTGAAGTAGAAAAACCACAAAGCATTTGATTGGTATTAGTTAAGGTCATCTTTGCTTCATTGCCGGTATCAAAAGGAATTTCTGTTTTCTTAGTGATTTGAAGAATTTCTGGGAAATCTTGAATAAGATGATaa                                                          >  1:4223487/1‑148 (MQ=255)
                                                                                           aTCCACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAcccgaattgctagttgattatttagccatgacttgacacccgatagaatatcttaaagtctctggttccagtgatttagctgattttaaca                                                          >  2:4501922‑M2/1‑57 (MQ=255)
                                                                                            tccacaccagTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAcccgaattgctagttgattatttagccatgacttgacacccgatagaatatcttaaagtctctggttccagtgatttagctgattttaacag                                                         >  1:2647708‑M2/4‑56 (MQ=255)
                                                                                             ccacaccaGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAcccgaattgctagttgattatttagccatgacttgacacccgatagaatatcttaaagtctctggttccagtgatttagctgattttaacagt                                                        >  2:3238479‑M2/3‑55 (MQ=255)
                                                                                                  ccAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAcccgaattgctagttgattatttagccatgacttgacacccgatagaatatcttaaagtctctggttccagtgatttagctgattttaacagtaaaga                                                   >  1:2582114‑M2/1‑50 (MQ=255)
                                                                                                   cAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAGGTCATCTTTGCTTCATTGCCGGTATCAAAAGGAATTTCTGTTTTTTTAGTGATTTGAAGAATTTCTGGGAAATCTTGAATAAGATGATAACTGAgtgt                                                  <  1:2008980/148‑1 (MQ=255)
                                                                                                    aGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAcccgaattgctagttgattatttagccatgacttgacacccgatagaatatcttaaagtctctggttccagtgatttagctgattttaacagtaaagaat                                                 <  2:4046764‑M2/148‑101 (MQ=255)
                                                                                                     gTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAcccgaattgctagttgattatttagccatgacttgacacccgatagaatatcttaaagtctctggttccagtgatttagctgattttaacagtaaagaata                                                <  1:4396323‑M2/148‑102 (MQ=255)
                                                                                                      ttCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAGGTCATCTTTGCTTCATTGCCGGTATCAAAAGGAATTTCTGTTTTTTTAGTGATTTGAAGAATTTCTGGGAAATCTTGAATAAGATGATAACTGAGTGTTGc                                               >  1:1776269/1‑148 (MQ=255)
                                                                                                       tCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAcccgaattgctagttgattatttagccatgacttgacacccgatagaatatcttaaagtctctggttccagtgatttagctgattttaacagtaaagaatacg                                              >  1:331239‑M2/1‑45 (MQ=255)
                                                                                                       tCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAcccgaattgctagttgattatttagccatgacttgacacccgatagaatatcttaaagtctctggttccagtgatttagctgattttaacagtaaagaatacg                                              <  2:442191‑M2/148‑104 (MQ=255)
                                                                                                           gAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAcccgaattgctagttgattatttagccatgacttgacacccgatagaatatcttaaagtctctggttccagtgatttagctgattttaacagtaaagaatacgctaa                                          <  2:1123479‑M2/148‑108 (MQ=255)
                                                                                                           gAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAcccgaattgctagttgattatttagccatgacttgacacccgatagaatatcttaaagtctctggttccagtgatttagctgattttaacagtaaagaatacgctaa                                          <  2:2494454‑M2/148‑108 (MQ=255)
                                                                                                              gTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAGGTCATCTTTGCTTCATTGCCGGTATCAAAAGGAATTTCTGTTTTTTTAGTGATTTGAAGAATTTCTGGGAAATCTTGAATAAGATGATAACTGAGTGTTGCTACGGCCt                                       <  1:3731322/148‑1 (MQ=255)
                                                                                                               tAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAGGTCATCTTTGCTTCATTGCCGGTATCAAAAGGAATTTCTGTTTTTTTAGTGATTTGAAGAATTTCTGGGAAATCTTGAATAAGATGATAACTGAGTGTTGCTACGGCCtt                                      >  2:398857/1‑148 (MQ=255)
                                                                                                                   aaaaCCACTAAGCATTTGATTGGTATTAGTTAAGGTCATCTTTGCTTCATTGCCGGTATCAAAAGGAATTTCTGTTTTTTTAGTGATTTGAAGAATTTCTGGGAAATCTTGAATAAGATGATAACTGAGTGTTGCTACGGCCTTTgcg                                  <  2:1504525/148‑1 (MQ=255)
                                                                                                                      aCCACTAAGCATTTGATTGGTATTAGTTAAGGTCATCTTTGCTTCATTGCCGGTATCAAAAGGAATTTCTGTTTTTTTAGTGATTTGAAGAATTTCTGGGAAATCTTGAATAAGATGATAACTGAGTGTTGCTACGGCCTTTGCGCTc                               >  1:3873096/1‑148 (MQ=255)
                                                                                                                       ccACTAAGCATTTGATTGGTATTAGTTAAcccgaattgctagttgattatttagccatgacttgacacccgatagaatatcttaaagtctctggttccagtgatttagctgattttaacagtaaagaatacgctaaaagtatcatctc                              <  1:272655‑M2/148‑120 (MQ=255)
                                                                                                                       ccACTAAGCATTTGATTGGTATTAGTTAAcccgaattgctagttgattatttagccatgacttgacacccgatagaatatcttaaagtctctggttccagtgatttagctgattttaacagtaaagaatacgctaaaagtatcatctc                              <  2:158779‑M2/148‑120 (MQ=255)
                                                                                                                       ccACTAAGCATTTGATTGGTATTAGTTAAGGTCATCTTTGCTTCATTGCCGGTATCAAAAGGAATTTCTGTTTTTTTAGTGATTTGAAGAATTTCTGGGAAATCTTGAATAAGATGATAACTGAGTGTTGCTACGGCCTTTGCGCTCa                              <  1:696589/148‑1 (MQ=255)
                                                                                                                             aGCATTTGATTGGTATTAGTTAAGGTCATCTTTGCTTCATTGCCGGTATCAAAAGGAATTTCTGTTTTTTTAGTGATTTGAAGAATTTCTGGGAAATCTTGAATAAGATGATAACTGAGTGTTGCTACGGCCTTTGCGCTCATTgtgt                        <  1:537450/148‑1 (MQ=255)
                                                                                                                                 tttGATTGGTATTAGTTAAcccgaattgctagttgattatttagccatgacttgacacccgatagaatatcttaaagtctctggttccagtgatttagctgattttaacagtaaagaatacgctaaaagtatcatctctaatttcaat                    <  1:4644217‑M2/148‑130 (MQ=255)
                                                                                                                                    gATTGGTATTAGTTAAGGTCATCTTTGCTTCATTGCCGGTATCAAAAGGAATTTCTGTTTTTTTAGTGATTTGAAGAATTTCTGGGAAATCTTGAATAAGATGATAACTGAGTGTTGCTACGGCCTTTGCGCTCATTGTGTTTGTTGc                 <  2:1824458/148‑1 (MQ=255)
                                                                                                                                         gTATTAGTTAAcccgaattgctagttgattatttagccatgacttgacacccgatagaatatcttaaagtctctggttccagtgatttagctgattttaacagtaaagaatacgctaaaagtatcatctctaatttcaattgaaaacc            >  2:1418129‑M2/1‑11 (MQ=255)
                                                                                                                                          tATTAGTTAAcccgaattgctagttgattatttagccatgacttgacacccgatagaatatcttaaagtctctggttccagtgatttagctgattttaacagtaaagaatacgctaaaagtatcatctctaatttcaattgaaaacct           <  2:4702694‑M2/148‑139 (MQ=255)
                                                                                                                                            ttAGTTAAcccgaattgctagttgattatttagccatgacttgacacccgatagaatatcttaaagtctctggttccagtgatttagctgattttaacagtaaagaatacgctaaaagtatcatctctaatttcaattgaaaaccttg         <  2:2571228‑M2/148‑141 (MQ=255)
                                                                                                                                             tAGTTAAGGTCATCTTTGCTTCATTGCCGGTATCAAAAGGAATTTCTGTTTTTTTAGTGATTTGAAGAATTTCTGGGAAATCTTGAATAAGATGATAACTGAGTGTTGCTACGGCCTTTGCGCTCATTGTGTTTGTTGCTGAAGCAcc        <  1:2781636/148‑1 (MQ=255)
                                                                                                                                                  aacccgaattgctagttgattatttagccatgacttgacacccgatagaatatcttaaagtctctggttccagtgatttagctgattttaacagtaaagaatacgctaaaagtatcatctctaatttcaattgaaaaccttgaggcga   <  2:2737270‑M2/148‑147 (MQ=255)
                                                                                                                                                   acccgaattgctagttgattatttagccatgacttgatacccgatagaatatcttaaagtctctggttccagtgatttagctgattttaacagtaaagaatacgctaaaagtatcatctctaatttcaattgaaaaccttgaggcgaa  <  2:3526385‑M2/148‑148 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
CTAAAACAACCGTAATGATTCTAAAACCGTTTTGATTTGTTGTTCCAGCAAAACAGTCAATTTGAAAACTTGTTGAACCTGTTTTCAAGCCATCTACACCAGTTCTTGAAGTAGAAAAACCACTAAGCATTTGATTGGTATTAGTTAAGGTCATCTTTGCTTCATTGCCGGTATCAAAAGGAATTTCTGTTTTTTTAGTGATTTGAAGAATTTCTGGGAAATCTTGAATAAGATGATAACTGAGTGTTGCTACGGCCTTTGCGCTCATTGTGTTTGTTGCTGAAGCACCAGACCC  >  CP043523/2060114‑2060408

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.