mutation predictions | marginal predictions | summary statistics | genome diff | command line log
|
breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal read alignment evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,535,690 | 0 | T | G | 52.0% | ‑0.9 / 35.7 | 25 | F542C (TTC→TGC) | ptsI | PTS enzyme I |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1297722 | 22 (0.860) | 5 (0.200) | 4/320 | 2.3 | 18.5% | coding (400/2676 nt) | adhE | fused acetaldehyde‑CoA dehydrogenase and iron‑dependent alcohol dehydrogenasealdehyde/alcohol dehydrogenase AdhE |
| ? | NC_000913 | = 2070271 | NA (NA) | noncoding (1/1331 nt) | IS2 | repeat region | |||||
| * | ? | NC_000913 | 1547494 = | 11 (0.430) | 3 (0.120) | 3/320 | 2.6 | 16.2% | coding (94/3048 nt) | fdnG | formate dehydrogenase N subunit alpha |
| ? | NC_000913 | = 3828512 | 20 (0.780) | coding (154/1206 nt) | gltS | glutamate:sodium symporter | |||||