New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3790742 =311 (1.710)3 (0.020) 3/176 14.9 1.0% coding (584/873 nt) htrL HtrL
?NC_000913 3790760 = 294 (1.700)coding (566/873 nt) htrL HtrL
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 314 total aligned reads displayed.

TTTCCAGAACTAATTTATAGAATTCTTTCCATTTATGCTGTGAACCAACAATTGCGCCCCCAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGAAAAGATGCATCTTACTTTCATCAAATGGGAAATCCCAAATTTTC  >  NC_000913/3790650‑3790834
                                                                                            |                                                                                            
tttCCAGAACTAATTTATAGAATTCTTTCCATTTATGCTGTGAACCAACAATTGCGCCCCCAATAATATATACATGATTGCCAATCATGAAAt                                                                                              >  1:4632913/1‑93 (MQ=255)
tttCCAGAACTAATTTATAGAATTCTTTCCATTTATGCTGTGAACCAACAATTGCGCCCCCAATAATATATACATGATTGCCAATCATGAAAt                                                                                              >  1:123701/1‑93 (MQ=255)
 ttCCAGAACTAATTTATAGAATTCTTTCCATTTATGCTGTGAACCAACAATTGCGCCCCCAATAATATATACATGATTGCCAATCATGAAATc                                                                                             >  1:4364158/1‑93 (MQ=255)
 ttCCAGAACTAATTTATAGAATTCTTTCCATTTATGCTGTGAACCAACAATTGCGCCCCCAATAATATATACATGATTGCCAATCATGAAATc                                                                                             >  2:3464005/1‑93 (MQ=255)
 ttCCAGAACTAATTTATAGAATTCTTTCCATTTATGCTGTGAACCAACAATTGCGCCCCCAATAATATATACATGATTGCCAATCATGAAATc                                                                                             <  1:1646777/93‑1 (MQ=255)
     aGAACTAATTTATAGAATTCTTTCCATTTATGCTGTGAACCAACAATTGCGCCCCCAATAATATATACATGATTGCCAATCATGAAATCaaaa                                                                                         >  2:1710822/1‑93 (MQ=255)
      gAACTAATTTATAGAATTCTTTCCATTTATGCTGTGAACCAACAATTGCGCCCCCAATAATATATACATGATTGCCAATCATGAAATCaaaaa                                                                                        >  2:2683951/1‑93 (MQ=255)
      gAACTAATTTATAGAATTCTTTCCATTTATGCTGTGAACCAACAATTGCGCCCCCAATAATATATACATGATTGCCAATCATGAAATCaaaaa                                                                                        >  1:335048/1‑93 (MQ=255)
      gAACTAATTTATAGAATTCTTTCCATTTATGCTGTGAACCAACAATTGCGCCCCCAATAATATATACATGATTGCCAATCATGAAATCaaaaa                                                                                        >  1:234118/1‑93 (MQ=255)
        aCTAATTTATAGAATTCTTTCCATTTATGCTGTGAACCAACAATTGCGCCCCCAATAATATATACATGATTGCCAATCATGAAATCAAAAAcc                                                                                      <  2:4293421/93‑1 (MQ=255)
           aaTTTATAGAATTCTTTCCATTTATGCTGTGAACCAACAATTGCGCCCCCAATAATATATACATGATTGCCAATCATGAAATCAAAAACCtgt                                                                                   <  1:2520840/93‑1 (MQ=255)
           aaTTTATAGAATTCTTTCCATTTATGCTGTGAACCAACAATTGCGCCCCCAATAATATATACATGATTGCCAATCATGAAATCAAAAACCtgt                                                                                   <  1:897498/93‑1 (MQ=255)
               tataGAATTCTTTCCATTTATGCTGTGAACCAACAATTGCGCCCCCAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTgttgtt                                                                               <  1:1463678/93‑1 (MQ=255)
               tataGAATTCTTTCCATTTATGCTGTGAACCAACAATTGCGCCCCCAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTgttgtt                                                                               >  2:3145635/1‑93 (MQ=255)
                 taGAATTCTTTCCATTTATGCTGTGAACCAACAATTGCGCCCCCAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTga                                                                             <  1:4339902/93‑1 (MQ=255)
                 taGAATTCTTTCCATTTATGCTGTGAACCAACAATTGCGCCCCCAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTga                                                                             >  2:1809207/1‑93 (MQ=255)
                   gAATTCTTTCCATTTATGCTGTGAACCAACAATTGCGCCCCCAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTgaga                                                                           >  1:679707/1‑93 (MQ=255)
                    aaTTCTTTCCATTTATGCTGTGAACCAACAATTGCGCCCCCAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGAt                                                                          <  1:1941969/93‑1 (MQ=255)
                     aTTCTTTCCATTTATGCTGTGAACCAACAATTGCGCCCCCAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGAtg                                                                         <  2:1229459/93‑1 (MQ=255)
                     aTTCTTTCCATTTATGCTGTGAACCAACAATTGCGCCCCCAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGAtg                                                                         >  2:576470/1‑93 (MQ=255)
                      ttCTTTCCATTTATGCTGTGAACCAACAATTGCGCCCCCAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGAtgt                                                                        >  1:3848312/1‑93 (MQ=255)
                      ttCTTTCCATTTATGCTGTGAACCAACAATTGCGCCCCCAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGAtgt                                                                        >  1:2177359/1‑93 (MQ=255)
                      ttCTTTCCATTTATGCTGTGAACCAACAATTGCGCCCCCAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGAtgt                                                                        >  1:1545005/1‑93 (MQ=255)
                      ttCTTTCCATTTATGCTGTGAACCAACAATTGCGCCCCCAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGAtgt                                                                        <  1:536/93‑1 (MQ=255)
                       tCTTTCCATTTATGCTGTGAACCAACAATTGCGCCCCCAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGAtgtg                                                                       >  2:2427195/1‑93 (MQ=255)
                       tCTTTCCATTTATGCTGTGAACCAACAATTGCGCCCCCAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGAtgtg                                                                       <  2:4646301/93‑1 (MQ=255)
                       tCTTTCCATTTATGCTGTGAACCAACAATTGCGCCCCCAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGAtgtg                                                                       >  2:4477637/1‑93 (MQ=255)
                       tCTTTCCATTTATGCTGTGAACCAACAATTGCGCCCCCAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGAtgtg                                                                       <  2:3854260/93‑1 (MQ=255)
                       tCTTTCCATTTATGCTGTGAACCAACAATTGCGCCCCCAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGAtgtg                                                                       >  2:656355/1‑93 (MQ=255)
                         tttCCATTTATGCTGTGAACCAACAATTGCGCCCCCAATAATATATACATGATTGCCAATCATGAACTCAAAAACCTGTTGTTGAGATGTGaa                                                                     >  1:1334242/1‑92 (MQ=255)
                         tttCCATTTATGCTGTGAACCAACAATTGCGCCCCCAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGAc                                                                     >  2:931105/1‑93 (MQ=255)
                         tttCCATTTATGCTGTGAACCAACAATTGCGCCCCCAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGAc                                                                     <  1:104006/93‑1 (MQ=255)
                         ttaccATTTATGCTGTGAACCAACAATTGCGCCCCCAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGAc                                                                     <  1:2499538/90‑1 (MQ=255)
                          ttCCATTTATGCTGTGAACCAACAATTGCGCCCCCAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACa                                                                    >  2:1980658/1‑93 (MQ=255)
                           tCCATTTATGCTGTGAACCAACAATTGCGCCCCCAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAg                                                                   >  1:2607085/1‑93 (MQ=255)
                            ccATTTATGCTGTGAACCAACAATTGCGCCCCCAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGt                                                                  <  1:4405232/93‑1 (MQ=255)
                             cATTTATGCTGTGAACCAACAATTGCGCCCCCAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTa                                                                 >  1:3273998/1‑93 (MQ=255)
                             cATTTATGCTGTGAACCAACAATTGCGCCCCCAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTa                                                                 >  1:3942403/1‑93 (MQ=255)
                              ttttATGCTGTGAACCAACAATTGCGCCCCCAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTaa                                                                <  2:3689670/92‑1 (MQ=255)
                              aTTTATGCTGTGAACCAACAATTGCGCCCCCAATAATATATACATGATTGCCAATCATGAACTCAAAAACCTGTTGTGAAGATGTGACGGTaa                                                                >  1:1120398/1‑93 (MQ=255)
                              aTTTATGCTGTGAACCAACAATTGCGCCCCCAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTaa                                                                <  1:4454897/93‑1 (MQ=255)
                                  aTGCTGTGAACCAACAATTGCGCCCCCAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGccc                                                            >  2:4012929/1‑93 (MQ=255)
                                    gCTGTGAACCAACAATTGCGCCCCCAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCtt                                                          <  2:787723/93‑1 (MQ=255)
                                       gtgAACCAACAATTGCGCCCCCAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCttttt                                                       <  1:2008599/93‑1 (MQ=255)
                                          aaCCAACAATTGCGCCCCCAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTta                                                    >  2:4604823/1‑93 (MQ=255)
                                              aacaaTTGCGCCCCCAATGATATATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGt                                                <  1:1289582/93‑1 (MQ=255)
                                              aacaaTTGCGCCCCCAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGt                                                >  1:4387803/1‑93 (MQ=255)
                                              aacaaTTGCGCCCCCAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGt                                                <  1:3966849/93‑1 (MQ=255)
                                                   ttGCGCCCCCAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGaaaa                                           >  2:1323760/1‑93 (MQ=255)
                                                     gcgcCCCCAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGAAAAGa                                         >  2:695819/1‑93 (MQ=255)
                                                     gcgcCCCCAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGAAAAGa                                         >  1:273763/1‑93 (MQ=255)
                                                      cgcCCCCAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGAAAAGAt                                        <  2:4174994/93‑1 (MQ=255)
                                                      cgcCCCCAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGAAAAGAt                                        <  2:3284179/93‑1 (MQ=255)
                                                       gcCCCCAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGAAAAGATg                                       >  1:1173210/1‑93 (MQ=255)
                                                        cccccAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGAAAAGATGc                                      >  2:2127574/1‑93 (MQ=255)
                                                        cccccAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGAAAAGATGc                                      >  2:30378/1‑93 (MQ=255)
                                                        cccccAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGAAAAGATGc                                      <  1:1986977/93‑1 (MQ=255)
                                                        cccccAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGAAAAGATGc                                      <  1:410167/93‑1 (MQ=255)
                                                         ccccAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGAAAAGATGCa                                     <  1:4559982/93‑1 (MQ=255)
                                                          cccAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGAAAAGATGCAt                                    >  1:369947/1‑93 (MQ=255)
                                                          cccAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGAAAAGATGCAt                                    >  1:3471270/1‑93 (MQ=255)
                                                          cccAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGAAAAGATGCAt                                    >  2:2305882/1‑93 (MQ=255)
                                                           ccAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGAAAAGATGCATc                                   <  1:140144/93‑1 (MQ=255)
                                                           ccAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGAAAAGATGCATc                                   >  1:855650/1‑93 (MQ=255)
                                                            cAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGAAAAGATGCATCt                                  <  2:4716213/93‑1 (MQ=255)
                                                              ataataTATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGAAAAGATGCATCTTa                                <  1:2405014/93‑1 (MQ=255)
                                                              ataataTATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGAAAAGATGCATCTTa                                <  1:576470/93‑1 (MQ=255)
                                                               taataTATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGAAAAGATGCATCTTAc                               >  2:1021491/1‑93 (MQ=255)
                                                               taataTATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGAAAAGATGCATCTTAc                               >  2:1670632/1‑93 (MQ=255)
                                                                 atatatACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGAAAAGATGCATCTTACtt                             >  1:962473/1‑93 (MQ=255)
                                                                    tataCATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGAAAAGATGCATCTTACTTtca                          >  1:3765004/1‑93 (MQ=255)
                                                                    tataCATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGAAAAGATGCATCTTACTTtca                          <  2:514725/93‑1 (MQ=255)
                                                                    tataCATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGAAAAGATGCATCTTACTTtca                          >  1:167415/1‑93 (MQ=255)
                                                                    tataCATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGCAAGCCCTTTTTTTATAGTGAAAAGATGCATCTTACtttaa                          >  1:2798310/1‑91 (MQ=255)
                                                                     ataCATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGAAAAGATGCATCTTACTTtcat                         <  2:2088602/93‑1 (MQ=255)
                                                                      taCATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGAAAAGATGCATCTTACTTtcatc                        >  1:4245966/1‑93 (MQ=255)
                                                                      taCATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGAAAAGATGCATCTTACTTtcatc                        >  1:3108316/1‑93 (MQ=255)
                                                                         aTGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGAAAAGATGCATCTTACTTTCATCaaa                     >  2:2932696/1‑93 (MQ=255)
                                                                         aTGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGAAAAGATGCATCTTACTTTCATCaaa                     <  2:150203/93‑1 (MQ=255)
                                                                          tGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGAAAAGATGCATCTTACTTTCATCAAAt                    >  1:114586/1‑93 (MQ=255)
                                                                           gATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGAAAATATGCATCTTACTTTCATCAAATg                   >  2:2605761/1‑93 (MQ=255)
                                                                           gATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGAAAAGATGCATCTTACTTTCATCAAATg                   <  2:372568/93‑1 (MQ=255)
                                                                           gATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGAAAAGATGCATCTTACTTTCATCAAATg                   >  2:3959671/1‑93 (MQ=255)
                                                                           gATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGAAAAGATGCATCTTACTTTCATCAAATg                   <  2:411358/93‑1 (MQ=255)
                                                                            aTTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGAAAAGATGCATCTTACTTTCATCAAATgg                  >  2:3553696/1‑93 (MQ=255)
                                                                            aTTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGAAAAGATGCATCTTACTTTCATCAAATgg                  <  2:1373280/93‑1 (MQ=255)
                                                                             ttGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGAAAAGATGCATCTTACTTTCATCAAATggg                 <  1:2225475/93‑1 (MQ=255)
                                                                             ttGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGAAAAGATGCATCTTACTTTCATCAAATggg                 <  2:2864737/93‑1 (MQ=255)
                                                                                  aaTCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGAAAAGATGCATCTTACTTTCATCAACTGGGAAATc            >  1:814406/1‑93 (MQ=255)
                                                                                  aaTCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGAAAAGATGCATCTTACTTTCATCAAATGGGAAATc            >  2:1604390/1‑93 (MQ=255)
                                                                                    tCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGAAAAGATGCATCTTACTTTCATCAAATGGGAAATccc          >  2:210640/1‑93 (MQ=255)
                                                                                      aTGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGAAAAGATGCATCTTACTTTCATCAAATGGGAAATCCCaa        >  1:1601830/1‑93 (MQ=255)
                                                                                       tGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGAAAAGATGCATCTTACTTTCATCAAATGGGAAATCCCaaa       <  1:3175590/93‑1 (MQ=255)
                                                                                        gAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGAAAAGATGCATCTTACTTTCATCAAATGGGAAATCCCaact      >  1:1787896/1‑91 (MQ=255)
                                                                                        gAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGAAAAGATGCATCTTACTTTCATCAAATGGGAAATCCCAAAt      <  1:1630576/93‑1 (MQ=255)
                                                                                         aaaTCACAAACCTGTAGTTGAGATGTGACAGTAAGCCCTTTTTATATGGTGAAAAGATGCATCTTACTTTCATCAAATGGGAAATCCCAAAtt     <  2:4216005/93‑1 (MQ=255)
                                                                                          aaTCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGAAAAGATGCATCTTACTTTCATCAAATGGGAAATCCCAAAttt    >  1:269825/1‑93 (MQ=255)
                                                                                          aaTCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGAAAAGATGCATCTTACTTTCATCAAATGGGAAATCCCAAAttt    >  1:295277/1‑93 (MQ=255)
                                                                                          aaTCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGAAAAGATGCATCTTACTTTCATCAAATGGGAAATCCCAAAttt    >  1:2045457/1‑93 (MQ=255)
                                                                                           aTCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGAAAAGATGCATCTTACTTTCATCAAATGGGAAATCCCAAAtttt   >  1:3036106/1‑93 (MQ=255)
                                                                                            |                                                                                            
TTTCCAGAACTAATTTATAGAATTCTTTCCATTTATGCTGTGAACCAACAATTGCGCCCCCAATAATATATACATGATTGCCAATCATGAAATCAAAAACCTGTTGTTGAGATGTGACAGTAAGCCCTTTTTTTATAGTGAAAAGATGCATCTTACTTTCATCAAATGGGAAATCCCAAATTTTC  >  NC_000913/3790650‑3790834

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.