New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 2460898 | 71 (0.290) | 75 (0.320) +CCC |
50/176 | 9.8 | 52.1% | intergenic (+232/‑134) | fadL/b2345 | FadL/hypothetical protein |
? | NC_000913 | 2460899 = | 71 (0.290) | intergenic (+233/‑133) | fadL/b2345 | FadL/hypothetical protein | |||||
Rejected: Coverage evenness skew score above cutoff. |
GGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2460807‑2460898 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAG > NC_000913/2460899‑2460988 ||| GGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATAC < 2:2029400/93‑1 GGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATAC > 1:5959793/1‑93 GGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATAC < 2:1349742/93‑1 GGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATAC < 1:6051181/93‑1 CCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATTCCCC‑CCCCCCCCCTGGC < 1:5998438/93‑1 GAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCCCCCCTGGCTAT < 1:3914526/93‑1 GAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCCCCCCTGGCTAT < 2:5056352/93‑1 GAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCCCCCCTGGCTAT < 1:2341215/93‑1 AGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCCCCCCTGGCTATTG < 1:1042219/93‑1 GAAAGGCATTTTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACCCC‑CCCCCCCCCTGGCTATTGTGC < 2:3050573/93‑1 AAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAAAGTTTTCTTTTCCGCATTTCCAGGATACCCC‑CCCCCCCCCTGGCTATTGTGCGC < 1:2375906/93‑1 GGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCCCCCCTGGCTATTGTGCGCTC > 2:6248337/1‑93 GGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCCCCCCTGGCTATTGTGCGCTC > 1:2706552/1‑93 GGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCCCCCCT‑GCTATTGTTCGCTCA > 1:3193397/1‑93 GCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCCCCCCTGGCTATTGTGCGCTCA < 2:6294107/93‑1 ATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCCCCCCTGGCTATTGTGCGCTCATA < 1:6195611/93‑1 ATATTTTCAGGCGTTCTGCTCGGCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCCCCCCTGGCTATTGTGCGCTCATA < 2:1085865/93‑1 ATATTTTCAGGCGTTCTGCCCGTTCTTTTCAAAGAATTTTCTTTTCTGCATTTCCAGGGTTCCCC‑CCCCCCCCCTGGCTATTGTGCGCTCATA < 2:5014409/93‑1 TATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCCCCCCTGCCTATTGTGCGCTCCTAC > 1:3531550/1‑93 TATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACCCC‑CCCCCCCCCTGGCTATTGTGCGCTCATAC < 1:5737329/93‑1 TTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCCCCCCTGGCTATTGTGCGCTCATACAC < 1:1639605/93‑1 TTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACACC‑CCCCCCCCCTGGCTATTGTGCGCTCATACACT < 1:6158301/93‑1 TTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCCCCCCTGGCTATTGTGCGCTCATACACTC < 2:2334243/93‑1 TCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCCCCCCTGCCTTTTGTGCGCTCATACCCTCA > 1:535511/1‑93 AGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAA < 1:1230928/93‑1 AGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAA < 1:1343155/93‑1 AGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAA < 1:2121986/93‑1 AGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCCCCCCTCGCTCTTGCGCGCTCATAAACTCAAt > 1:1909783/1‑92 AGGCGTTCTGCCCGTCCTTCTCAAAGAGTTTACTTTTCGGCATTTCCAGGAT‑CCCCCCCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAA < 1:686916/93‑1 GCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATT < 1:3692312/93‑1 GCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCCCCCCTGGCTATTGTGCGCTCATACACTAAAATT > 2:3099898/1‑93 GTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACCC‑‑CCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAA < 1:1355823/93‑1 TCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCCCCCCTGGCTATTGGGGGCTCATACACTCAAATTAAAa > 2:1020412/1‑92 tCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATA < 1:5655384/92‑1 tCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACCCCCCCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGAT < 1:64595/92‑1 tCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGAT‑CCTCCCCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATA < 2:1456448/92‑1 cCTCGTCCTTTGCAAAGAGTTTTCTTTTCCGCGTTTCCAGGAGACCCC‑CCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATA < 2:5482210/92‑1 GCTCGTCCTTCCTAAAGAGTTTTCTTTTCTGCATTTCCAGGATACCCC‑CCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATA < 1:3372075/93‑1 CTCGTCCTTCTCAAAGAGTTTTCTTTTCTGCATTTCCAGGATACCCC‑CCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAG < 1:1090304/93‑1 ccccCCTTCCCAAAGAATTTACTTTTCCGCATTTCCAGGAT‑CCACCCCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGG < 2:2456387/89‑1 CGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACCCC‑CCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGT < 2:3525116/93‑1 CCTTTTCAAAAAGTTTTCTTTTCTGCATTTCCAGGATTCCCC‑CCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCT < 2:4734153/93‑1 CCTTCTCAAAGAGTTTACTTTTCTGCATTTCCCGGA‑ATCCCCCCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCT < 2:3799445/93‑1 CCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACCC‑‑CCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTA < 1:3525419/93‑1 CTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACCCC‑CCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTA < 1:6244790/93‑1 TTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAA > 2:4131071/1‑93 tgctAAAGAGTTTTGTTTTCTGCATTTTCAAGAAACCCCCCCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAA < 1:2062515/89‑1 TCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATTCCCC‑CCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAA < 2:1944300/93‑1 CTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACCCC‑CCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAAT < 1:347283/93‑1 CAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAA < 2:5646554/93‑1 CAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑CTCTCCCCCCCCCTGGCTTTTGTGTGATCATAACCTCAATTTAAAGATAGGTTCTAAATAA > 2:4236006/1‑93 AAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAA < 2:3862306/93‑1 AAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAAT < 1:6077247/93‑1 AAGAGTTTACTTTTCTGCATTTCCAGGAT‑CCTCCCCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAAT < 2:4584442/93‑1 AGAGTTTATTTTTCGGCATTTCCAGGATTCCC‑‑CCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGA < 2:4032730/93‑1 AGTTTTCTTTTCTTCATTTCCAGGATTCCCC‑CCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAG < 2:4568890/93‑1 AGTTTACTTTTCTGCGTTTCCAGGATACCCC‑CCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAG < 2:378494/93‑1 GTTTCCTTTTCTGCATTTCCAGGAT‑CCCCCCCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGC < 2:3280314/93‑1 ttCTTTTCTGCATTTCCAGGA‑ATCCGCCCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTT < 2:589659/91‑1 TACTTTTCTGCATTTCCAGGATACTCC‑CCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTT < 1:2413592/93‑1 tCTTTTCTGCATTTCCAGGATACTCC‑CCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTT < 1:1811083/92‑1 CTTTTCTGCCTTTCCAGGATTCTCC‑CCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTT < 2:2441748/93‑1 CTTTTCTGCATTTCCAGGATACTCC‑CCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTT < 2:3437823/93‑1 CTTTTCTGCATTTCCAGGATACTCC‑CCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTT < 2:1360749/93‑1 TTTCTGCATTTCCAGGATACCCC‑CCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTT < 1:5356760/93‑1 TCTGCATTTCCAGGATTCTCC‑CCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGA < 1:5107444/93‑1 CTGCATTTCCAGGATACCCC‑CCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGAT < 1:3046687/93‑1 CTGCATTTCCAGGA‑AGCCCCCCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGAT < 1:2601425/93‑1 tCATTTCCAGGATACCCC‑CCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAG < 1:1103909/92‑1 CATTTCCAGGATACTCC‑CCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGT < 1:322997/93‑1 CATTTCCAGGATACTCC‑CCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGT < 1:3484129/93‑1 cTTTCCAGGATGCCCC‑CCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTC < 2:4264909/92‑1 TTCCAGGATACTCC‑CCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTA < 1:229051/93‑1 TTCCAGGAAACCCC‑CCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTA < 2:4868806/93‑1 TCCAGGATACCCC‑CCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTAT < 1:3698413/93‑1 TCCAGGAAACCCC‑CCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTAT < 1:4410082/93‑1 CCAGGAT‑CCCCCCCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATT < 1:5258718/93‑1 CAGGATACTCC‑CCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTT < 1:2837576/93‑1 CAGGATACCCC‑CCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTT < 1:3064576/93‑1 gtCCCCCCCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATT < 1:1255748/91‑1 taCCCCCCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTA < 2:3126868/91‑1 tCCCCCCCCCCCCCCTGCCTATTGTGCGCTCATACACGAAATTTAAAGATAGGTTCAAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTA < 2:3793364/92‑1 aaCCCCCCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTA < 2:2397005/91‑1 tCCCCCCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAG < 2:4756585/92‑1 aCCCCCCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAG < 2:2749242/92‑1 ||| GGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2460807‑2460898 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAG > NC_000913/2460899‑2460988 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |