BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2460898	71 (0.290)	75 (0.320) +CCC	50/176	9.8	52.1%	intergenic (+232/‑134)	fadL/b2345	FadL/hypothetical protein
*	?	NC_000913	2460899 =	71 (0.290)	75 (0.320) +CCC	50/176	9.8	52.1%	intergenic (+233/‑133)	fadL/b2345	FadL/hypothetical protein
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 137 total aligned reads displayed.

GGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑T‑‑‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCAT  >  NC_000913/2460807‑2460985

ggTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑c                                                                                                >  1:5959793/1‑93 (MQ=255)

ggTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑c                                                                                                <  2:1349742/93‑1 (MQ=255)

ggTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑c                                                                                                <  2:2029400/93‑1 (MQ=255)

 gTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑t                                                                                              <  2:312774/93‑1 (MQ=255)

  tATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑C‑‑‑C‑T‑‑‑‑c                                                                                         <  2:3267435/93‑1 (MQ=255)

  tATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑T‑‑‑‑c                                                                                         <  2:6273286/93‑1 (MQ=255)

   aTCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑T‑‑‑‑cc                                                                                        >  2:5370042/1‑93 (MQ=255)

    tCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑T‑‑‑‑ccc                                                                                       <  1:3347057/93‑1 (MQ=255)

     ccACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑T‑‑‑‑cccc                                                                                      <  2:5972450/93‑1 (MQ=255)

      cacaGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑T‑‑‑‑ccccc                                                                                     >  2:3671776/1‑93 (MQ=255)

       acaGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑T‑‑‑‑ccccc‑‑c                                                                                  >  2:1984051/1‑93 (MQ=255)

        caGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑T‑‑‑‑ccccc‑‑cc                                                                                 <  1:1874930/93‑1 (MQ=255)

        caGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑T‑‑‑‑ccccc‑‑cc                                                                                 >  1:4287771/1‑93 (MQ=255)

        caGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑T‑‑‑‑ccccc‑‑cc                                                                                 <  1:5271303/93‑1 (MQ=255)

           aCAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑T‑‑‑‑ccccc‑‑ccccc                                                                              >  1:4102482/1‑92 (MQ=255)

             aaaCCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑T‑‑‑C‑T‑‑‑‑ccccc‑‑ccccctg                                                                            <  1:5909574/93‑4 (MQ=255)

             aaaCCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑T‑‑‑‑ccccc‑‑ccccccc                                                                            >  2:3531554/1‑90 (MQ=255)

                  tGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑TC‑‑‑CCCCC‑‑CCCCTGGCTAt                                                                        <  1:6033877/93‑1 (MQ=255)

                    gaGGGAAAGGCAAATTTTCAGGCGTTCCGGCCGTCCTTTCCAAAAGGTTTTCTTTTCCGGATTT‑CCCGG‑G‑‑T‑‑ACC‑C‑C‑‑‑‑CCCCC‑‑CCCCTGGCTAtt                                                                       <  2:5400476/92‑1 (MQ=255)

                     aGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑TCC‑‑CCCCC‑‑CCCCTGGCTATtg                                                                      <  1:1042219/93‑1 (MQ=255)

                      gggAAAGCCATTTTTGCAGGCGTTCTGCTCTTCCTTCTCAAAGTTTTTATTTTTCTGCATTC‑CCGGG‑A‑‑TC‑C‑‑‑C‑C‑‑‑‑CCCCC‑‑CCCCTGGCTATtgtg                                                                    <  2:2264182/93‑1 (MQ=255)

                        gAAAGGCATTTTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑ACC‑C‑C‑‑‑‑CCCCC‑‑CCCCTGGCTATTGTgc                                                                   <  2:3050573/93‑1 (MQ=255)

                          aaGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAAAGTTTTCTTTTCCGCATTT‑CCAGG‑A‑‑T‑‑ACC‑C‑C‑‑‑‑CCCCC‑‑CCCCTGGCTATTGTgcgc                                                                 <  1:2375906/93‑1 (MQ=255)

                            ggCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑TCC‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑c                                                              >  1:2706552/1‑93 (MQ=255)

                             gCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑TCC‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑Ca                                                             <  2:6294107/93‑1 (MQ=255)

                              cATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑TC‑‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATa                                                           <  2:2744958/93‑1 (MQ=255)

                               attttttCAGGGGTTTTCCTCGTCCTTTTCAAAGAGTTTTCTTTTCTGCATTT‑CCCGG‑A‑‑TCCC‑‑‑C‑C‑‑‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATa                                                           <  2:4937419/90‑1 (MQ=255)

                               atatTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑TCC‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATa                                                           <  1:6195611/93‑1 (MQ=255)

                               atatTTTCAGGCGTTCTGCTCGGCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑TCC‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATa                                                           <  2:1085865/93‑1 (MQ=255)

                               atatTTTCAGGCGTTCTGCCCGTTCTTTTCAAAGAATTTTCTTTTCTGCATTT‑CCAGG‑G‑‑TTCC‑‑‑C‑C‑‑‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATa                                                           <  2:5014409/93‑1 (MQ=255)

                                tatTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑TCC‑‑CCCCC‑‑CCCCTGCCTATTGTGCGCT‑CCTac                                                          >  1:3531550/1‑93 (MQ=255)

                                tatTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑TC‑‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATaca                                                         <  1:6074947/93‑1 (MQ=255)

                                  ttttCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑TCC‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATacac                                                        <  1:1639605/93‑1 (MQ=255)

                                   tttCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑TACA‑‑‑C‑C‑‑‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACt                                                       <  1:6158301/93‑1 (MQ=255)

                                    ttCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑TCC‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTc                                                      <  2:2334243/93‑1 (MQ=255)

                                    ttCAGCGGTTCTGTTCGTCCTTTTCGAAGAGTTTCATTTTCGGCATTT‑CCAGG‑A‑‑TCCA‑‑‑C‑C‑‑‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTc                                                      <  2:5059342/93‑1 (MQ=255)

                                     tCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑TCC‑‑CCCCC‑‑CCCCTGCCTTTTGTGCGCT‑CATACCCTCa                                                     >  1:535511/1‑93 (MQ=255)

                                       aGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑TCC‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCaaa                                                   <  1:1343155/93‑1 (MQ=255)

                                       aGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑TCC‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCaaa                                                   <  1:1230928/93‑1 (MQ=255)

                                       aGGCGTTCTGCCCGTCCTTCTCAAAGAGTTTACTTTTCGGCATTT‑CCAGG‑A‑‑TCCC‑‑‑C‑C‑‑‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCaaa                                                   <  1:686916/93‑1 (MQ=255)

                                        ggCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑TCAGG‑A‑‑T‑‑A‑‑‑C‑T‑‑‑‑CCCCCCACCCCTGGCTCTTGTGGGCT‑GCTGCACTCCAAt                                                  >  2:2219657/1‑93 (MQ=255)

                                        ggCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑TC‑‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCAAAtt                                                 <  2:1017846/93‑1 (MQ=255)

                                         gCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑TCC‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCAAAtt                                                 <  1:3692312/93‑1 (MQ=255)

                                           gTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑C‑‑‑C‑TC‑‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCAAATTaaa                                              <  2:3346971/93‑1 (MQ=255)

                                             tccgCTCGGCCTTTTCAAAGGCGTTACTTTTCCGCATTTCCCGGG‑AC‑C‑‑C‑‑‑C‑C‑‑‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCAAATTAAAg                                             <  2:3655286/90‑1 (MQ=255)

                                               tGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑TC‑‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATa                                          <  1:3241168/93‑1 (MQ=255)

                                                tcTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑C‑‑‑C‑TCC‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATa                                          <  2:1456448/92‑1 (MQ=255)

                                                tcTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑ACCCC‑C‑‑‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCAAATTAAAGAt                                           <  1:64595/92‑1 (MQ=255)

                                                tcTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑TCC‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATa                                          <  1:5655384/92‑1 (MQ=255)

                                                gCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑TC‑‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAg                                         <  1:562321/93‑1 (MQ=255)

                                                gCTCGTCCTTCCTAAAGAGTTTTCTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑ACC‑C‑C‑‑‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATa                                          <  1:3372075/93‑1 (MQ=255)

                                                 cTCGTCCTTCTCAAAGAGTTTTCTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑ACC‑C‑C‑‑‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAg                                         <  1:1090304/93‑1 (MQ=255)

                                                  tCGTCCTTCTCGAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑TCCCCCCCCC‑‑CCCCGGGCTTTTGTGCCCT‑CATACCATCAAATaaaatacg                                          >  2:262772/1‑89 (MQ=255)

                                                  tCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑TC‑‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGt                                       <  1:1142817/93‑1 (MQ=255)

                                                  tCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑TC‑‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGt                                       <  1:2283881/93‑1 (MQ=255)

                                                     tCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑TC‑‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCt                                    >  2:5802056/1‑93 (MQ=255)

                                                      ccTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCCGGAA‑‑TC‑C‑‑‑C‑C‑‑‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCt                                    <  2:3799445/93‑1 (MQ=255)

                                                      ccTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑TC‑‑‑CCCCC‑‑CCCCCGGTCATTGTGCGCT‑CCCAGACCCAAATTGAACATAGGGTCta                                   >  1:4539180/1‑93 (MQ=255)

                                                       cTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑ACC‑C‑C‑‑‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCta                                   <  1:6244790/93‑1 (MQ=255)

                                                        ttCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑TCC‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCtaa                                  >  2:4131071/1‑93 (MQ=255)

                                                         tgctaaaGAGTTTTGTTTTCTGCATTT‑TCAAG‑A‑‑A‑‑ACCCC‑C‑‑‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCtaa                                  <  1:2062515/89‑1 (MQ=255)

                                                         tctcAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑TTCC‑‑‑C‑C‑‑‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCtaaa                                 <  2:1944300/93‑1 (MQ=255)

                                                          ctcAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑ACC‑C‑C‑‑‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCtaaat                                <  1:347283/93‑1 (MQ=255)

                                                           tcAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑TCC‑‑CCCCC‑‑CCCCTGGCCATTTTGCGCT‑CCAAAACCCAAATTTAAAACAGGTCTtaaaaa                               >  1:2535832/1‑91 (MQ=255)

                                                            cAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑TCC‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCtaaataa                              <  2:5646554/93‑1 (MQ=255)

                                                            cAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑TCC‑‑CCCCC‑‑CCCCTGCCTTTTTTG‑GCTCCTTAACCCCAAATTAAAAATAGGTTCaaaataa                              >  2:4906453/1‑93 (MQ=255)

                                                             aaaGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑TCC‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCtaaataaa                             <  2:3862306/93‑1 (MQ=255)

                                                              aaGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑C‑‑‑C‑TCC‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTaaataaat                            <  2:4584442/93‑1 (MQ=255)

                                                              aaGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑TCC‑‑CCCCC‑‑CCCCTGGTTATGTTGCCCT‑CATCCACTCAAATGAAAGATTGGTTCAaattaaat                            >  1:5094194/1‑93 (MQ=255)

                                                              aaGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑TCC‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTaaataaat                            <  1:6077247/93‑1 (MQ=255)

                                                              aaGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑TCC‑‑CCCCC‑‑CCCCTGCCTTTTGTGCGCC‑CATACCCCCAAATTAAAAAAAGGTTTTaaataaat                            >  2:5119269/1‑93 (MQ=255)

                                                               agagTTTATTTTTCGGCATTT‑CCAGG‑AT‑T‑‑C‑‑‑C‑C‑‑‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGa                          <  2:4032730/93‑1 (MQ=255)

                                                               agagTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑TCC‑‑CCCCC‑‑CCCCTGCCTTTTTGGCCCC‑TACACTCTCAATTTAAAAATAGTTTTtaaataaaag                           >  2:1679812/1‑91 (MQ=255)

                                                               agagTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑TC‑‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGa                          <  2:3125342/93‑1 (MQ=255)

                                                                 agTTTTCTTTTCTTCATTT‑CCAGG‑A‑‑TTCC‑‑‑C‑C‑‑‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAg                         <  2:4568890/93‑1 (MQ=255)

                                                                 agTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑T‑‑‑C‑TC‑‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGc                        <  2:4757025/93‑1 (MQ=255)

                                                                 agTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑T‑‑‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCg                       <  2:2991174/93‑1 (MQ=255)

                                                                     ttcTTTTCTGCATTT‑CCAGGAA‑‑T‑‑C‑‑‑CGC‑‑‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGtt                     <  2:589659/91‑1 (MQ=255)

                                                                      tcTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑TCC‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGttt                    <  1:1811083/92‑1 (MQ=255)

                                                                      aCTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑TC‑‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGtttt                   >  2:4071061/1‑93 (MQ=255)

                                                                       cTTTTCTGCCTTT‑CCAGG‑A‑‑T‑‑T‑‑‑C‑TCC‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGtttt                   <  2:2441748/93‑1 (MQ=255)

                                                                       cTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑TCC‑‑CCCCC‑‑CCCCTGGCTATTTTGCGCT‑CATACACTCAAATTAAAATTAGGTCTTAAATAAATGAGCGtttt                   >  2:6058508/1‑93 (MQ=255)

                                                                       cTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑TCC‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGtttt                   <  2:1360749/93‑1 (MQ=255)

                                                                       cTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑TCC‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGtttt                   <  2:3437823/93‑1 (MQ=255)

                                                                         tttCTGCATTT‑CCAGG‑A‑‑T‑‑ACC‑C‑C‑‑‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGtttttt                 <  1:5356760/93‑1 (MQ=255)

                                                                           tCTGCATTT‑CCAGG‑A‑‑T‑‑T‑‑‑C‑TCC‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGa               <  1:5107444/93‑1 (MQ=255)

                                                                           tCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑TC‑‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGAt              >  2:6031134/1‑93 (MQ=255)

                                                                            cTGCATTT‑CCAGG‑AAGC‑‑C‑‑‑C‑C‑‑‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGAt              <  1:2601425/93‑1 (MQ=255)

                                                                            cTGCATTT‑CCAGG‑A‑‑T‑‑ACC‑C‑C‑‑‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGAt              <  1:3046687/93‑1 (MQ=255)

                                                                             tGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑TCC‑‑CCCCC‑‑CCCCTGGCCATTGTGCGCC‑TTTACATTCAACTTAAAGATAGGTTTTAAATAAAAGAGCGttttttatta             >  2:3983601/1‑89 (MQ=255)

                                                                              tcATTT‑CCAGG‑A‑‑T‑‑ACC‑C‑C‑‑‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAg            <  1:1103909/92‑1 (MQ=255)

                                                                               cATTT‑CCAGG‑A‑‑T‑‑G‑‑‑C‑TC‑‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTc          <  2:248976/93‑1 (MQ=255)

                                                                               cATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑TCC‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGt           <  1:322997/93‑1 (MQ=255)

                                                                               cATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑TCC‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGt           <  1:3484129/93‑1 (MQ=255)

                                                                                cttt‑CCAGG‑A‑‑T‑‑C‑‑‑C‑T‑‑‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTa        <  1:1986690/92‑1 (MQ=255)

                                                                                  tt‑CCAGG‑A‑‑T‑‑A‑‑‑C‑TCC‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTa        <  1:229051/93‑1 (MQ=255)

                                                                                  tt‑CCAGG‑A‑‑T‑‑A‑‑‑C‑TC‑‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTAt       <  2:229655/93‑1 (MQ=255)

                                                                                   t‑CCAGG‑A‑‑T‑‑A‑‑‑C‑CCC‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTAt       <  1:3698413/93‑1 (MQ=255)

                                                                                       aGG‑A‑‑T‑‑A‑‑‑C‑TCC‑‑CCCCC‑‑CCCCCGGCTTTTTTGCCCC‑CCTACACTCAAATTAAAAATAGGTTTTAAATAAATGAGCGTTTTTTTATATTCTAtttt    >  2:1640927/1‑92 (MQ=255)

                                                                                        gg‑A‑‑T‑‑A‑‑‑C‑TC‑‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCAt  <  1:289963/93‑1 (MQ=255)

GGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTT‑CCAGG‑A‑‑T‑‑A‑‑‑C‑T‑‑‑‑CCCCC‑‑CCCCTGGCTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCAT  >  NC_000913/2460807‑2460985

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 10 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.