BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2460898	71 (0.290)	75 (0.320) +CCC	50/176	9.8	52.1%	intergenic (+232/‑134)	fadL/b2345	FadL/hypothetical protein
*	?	NC_000913	2460899 =	71 (0.290)	75 (0.320) +CCC	50/176	9.8	52.1%	intergenic (+233/‑133)	fadL/b2345	FadL/hypothetical protein
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 140 total aligned reads displayed.

CGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑T‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCAT  >  NC_000913/2460806‑2460985

cGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑a                                                                                                   <  1:5029268/93‑1 (MQ=255)

cGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑a                                                                                                   <  2:1254183/93‑1 (MQ=255)

cGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑a                                                                                                   <  1:670027/93‑1 (MQ=255)

 ggTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑c                                                                                               >  1:5959793/1‑93 (MQ=255)

 ggTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑c                                                                                               <  2:2029400/93‑1 (MQ=255)

 ggTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑c                                                                                               <  1:6051181/93‑1 (MQ=255)

 ggTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑c                                                                                               <  2:1349742/93‑1 (MQ=255)

   tATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑C‑‑‑C‑T‑‑c                                                                                          <  2:3267435/93‑1 (MQ=255)

   tATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑T‑‑c                                                                                          <  2:6273286/93‑1 (MQ=255)

    aTCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑T‑‑cc                                                                                         >  2:5370042/1‑93 (MQ=255)

     tCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑T‑‑ccc                                                                                        <  1:3347057/93‑1 (MQ=255)

      ccACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑T‑‑cccc                                                                                       <  2:5972450/93‑1 (MQ=255)

       cacaGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑T‑‑ccccc                                                                                      >  2:3671776/1‑93 (MQ=255)

        acaGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑T‑‑ccccc‑‑c                                                                                   >  2:1984051/1‑93 (MQ=255)

         caGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑T‑‑ccccc‑‑cc                                                                                  >  1:4287771/1‑93 (MQ=255)

         caGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑T‑‑ccccc‑‑cc                                                                                  <  1:5271303/93‑1 (MQ=255)

            aCAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑T‑‑ccccc‑‑ccccc                                                                               >  2:189719/1‑92 (MQ=255)

              aaaCCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑T‑‑‑C‑T‑‑ccccc‑‑ccccctg                                                                             <  1:5909574/93‑4 (MQ=255)

              aaaCCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑T‑‑ccccc‑‑ccccccc                                                                             >  2:3531554/1‑90 (MQ=255)

               aaCCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑T‑‑ccccc‑‑cccccctg                                                                            <  1:4032882/93‑5 (MQ=255)

                     gaGGGAAAGGCAAATTTTCAGGCGTTCCGGCCGTCCTTTCCAAAAGGTTTTCTTTTCCGGATTTCCCGG‑GT‑‑ACC‑C‑C‑‑CCCCC‑‑CCCCTGG‑CTAtt                                                                       <  2:5400476/92‑1 (MQ=255)

                      aGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑TCCCCCCC‑‑CCCCTGG‑CTATtg                                                                      <  1:1042219/93‑1 (MQ=255)

                      aGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑TC‑CCCCC‑‑CCCCTGG‑CTATtgt                                                                     <  1:3350870/93‑1 (MQ=255)

                             ggCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑TCCCCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑c                                                              >  1:2706552/1‑93 (MQ=255)

                             ggCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑TC‑CCCCC‑‑CCCCCTG‑CTATTGTTCGCT‑Ca                                                             >  1:3193397/1‑93 (MQ=255)

                              gCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑TCCCCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑Ca                                                             <  2:6294107/93‑1 (MQ=255)

                               cATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑TC‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATa                                                           <  2:2744958/93‑1 (MQ=255)

                                attttttCAGGGGTTTTCCTCGTCCTTTTCAAAGAGTTTTCTTTTCTGCATTTCCCGG‑ATCCC‑‑‑C‑C‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATa                                                           <  2:4937419/90‑1 (MQ=255)

                                atatTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑TCCCCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATa                                                           <  1:6195611/93‑1 (MQ=255)

                                 tatTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑TC‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATaca                                                         <  1:6074947/93‑1 (MQ=255)

                                   ttttCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑TCCCCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATacac                                                        <  1:1639605/93‑1 (MQ=255)

                                     ttCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑TCCCCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTc                                                      <  2:2334243/93‑1 (MQ=255)

                                     ttCAGCGGTTCTGTTCGTCCTTTTCGAAGAGTTTCATTTTCGGCATTTCCAGG‑ATCCA‑‑‑C‑C‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTc                                                      <  2:5059342/93‑1 (MQ=255)

                                      tCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑TCCCCCCC‑‑CCCCTGC‑CTTTTGTGCGCT‑CATACCCTCa                                                     >  1:535511/1‑93 (MQ=255)

                                        aGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑TCCCCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCaaa                                                   <  1:2121986/93‑1 (MQ=255)

                                        aGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑TCCCCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCaaa                                                   <  1:1230928/93‑1 (MQ=255)

                                        aGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑TCCCCCCC‑‑CCCCTCG‑CTCTTGCGCGCT‑CATAAACTCaat                                                   >  1:1909783/1‑92 (MQ=255)

                                         ggCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTTCAGG‑AT‑‑A‑‑‑C‑T‑‑CCCCCCACCCCTGG‑CTCTTGTGGGCT‑GCTGCACTCCAAt                                                  >  2:2219657/1‑93 (MQ=255)

                                         ggCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑TC‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCAAAtt                                                 <  2:1017846/93‑1 (MQ=255)

                                          gCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑TCCCCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCAAAtt                                                 <  1:3692312/93‑1 (MQ=255)

                                          gCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑TCCCCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTAAAAtt                                                 >  2:3099898/1‑93 (MQ=255)

                                            gTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑C‑‑‑C‑TC‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCAAATTaaa                                              <  2:3346971/93‑1 (MQ=255)

                                            gTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑AC‑‑C‑C‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCAAATTaaa                                              <  1:1355823/93‑1 (MQ=255)

                                            gTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑TCCCCCCC‑‑CCCCTGG‑CTTTTGTGCCCT‑CCTCACCTCAACTTaa                                               >  1:627140/1‑93 (MQ=255)

                                              tCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑TCCCCCCC‑‑CCCCTGG‑CTATTGGGGGCT‑CATACACTCAAATTaaaa                                             >  2:1020412/1‑92 (MQ=255)

                                                 tcTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑C‑‑‑C‑TCCCCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCAAATTAAAGATa                                          <  2:1456448/92‑1 (MQ=255)

                                                 tcTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑ACCCC‑C‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCAAATTAAAGAt                                           <  1:64595/92‑1 (MQ=255)

                                                 tcTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑TCCCCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCAAATTAAAGATa                                          <  1:5655384/92‑1 (MQ=255)

                                                 gCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑TC‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCAAATTAAAGATAg                                         <  1:562321/93‑1 (MQ=255)

                                                 gCTCGTCCTTCCTAAAGAGTTTTCTTTTCTGCATTTCCAGG‑AT‑‑ACC‑C‑C‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCAAATTAAAGATa                                          <  1:3372075/93‑1 (MQ=255)

                                                 ccTCGTCCTTTGCAAAGAGTTTTCTTTTCCGCGTTTCCAGG‑AG‑‑ACC‑C‑C‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCAAATTAAAGATa                                          <  2:5482210/92‑1 (MQ=255)

                                                  cTCGTCCTTCTCAAAGAGTTTTCTTTTCTGCATTTCCAGG‑AT‑‑ACC‑C‑C‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCAAATTAAAGATAg                                         <  1:1090304/93‑1 (MQ=255)

                                                   tCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑TC‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGt                                       <  1:2283881/93‑1 (MQ=255)

                                                   tCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑TC‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGt                                       <  1:1142817/93‑1 (MQ=255)

                                                   ccccccTTCCCAAAGAATTTACTTTTCCGCATTTCCAGG‑ATCCA‑‑‑C‑C‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCAAATTAAAGATAgg                                        <  2:2456387/89‑1 (MQ=255)

                                                    cGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑ACC‑C‑C‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGt                                       <  2:3525116/93‑1 (MQ=255)

                                                      tCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑TC‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCt                                    >  2:5802056/1‑93 (MQ=255)

                                                       ccTTTTCAAAAAGTTTTCTTTTCTGCATTTCCAGG‑ATTCC‑‑‑C‑C‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCt                                    <  2:4734153/93‑1 (MQ=255)

                                                       ccTTCTCAAAGAGTTTACTTTTCTGCATTTCCCGGAATC‑C‑‑‑C‑C‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCt                                    <  2:3799445/93‑1 (MQ=255)

                                                       ccTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑AC‑‑C‑C‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCta                                   <  1:3525419/93‑1 (MQ=255)

                                                         ttCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑TCCCCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCtaa                                  >  2:4131071/1‑93 (MQ=255)

                                                          tctcAAAGAGTTTACTTTTCTGCATTTCCAGG‑ATTCC‑‑‑C‑C‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCtaaa                                 <  2:1944300/93‑1 (MQ=255)

                                                          tctcAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑TCCCCCCC‑‑CCCCCGG‑CTATTTTGCGCT‑ACTACCCTCAAATTAAAAATAGGTTTtaaa                                 >  1:5448368/1‑93 (MQ=255)

                                                            tcAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑TCCCCCCC‑‑CCCCTGG‑CCATTTTGCGCT‑CCAAAACCCAAATTTAAAACAGGTCTtaaaaa                               >  1:2535832/1‑91 (MQ=255)

                                                             cAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑ACT‑C‑T‑‑CCCCC‑‑CCCCTGG‑CTTTTGTGTGAT‑CATAACCTCAATTTAAAGATAGGTTCtaaataa                              >  2:4236006/1‑93 (MQ=255)

                                                             cAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑TCCCCCCC‑‑CCCCTGG‑CTATTTTGGGCC‑CATCCCCTCAAATTAAACATAGGTTTtaaataa                              >  2:2641559/1‑93 (MQ=255)

                                                             cAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑TCCCCCCC‑‑CCCCTGC‑CTTTTTTG‑GCTCCTTAACCCCAAATTAAAAATAGGTTCaaaataa                              >  2:4906453/1‑93 (MQ=255)

                                                             cAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑TC‑CCCCC‑‑CCCCCGGCCTATTGTGGGCT‑CATACACCCAAATTAAACATACGTTCtaaataa                              >  1:6179776/1‑93 (MQ=255)

                                                               aaGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑C‑‑‑C‑TCCCCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTaaataaat                            <  2:4584442/93‑1 (MQ=255)

                                                               aaGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑TCCCCCCC‑‑CCCCTGG‑TTATGTTGCCCT‑CATCCACTCAAATGAAAGATTGGTTCAaattaaat                            >  1:5094194/1‑93 (MQ=255)

                                                               aaGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑TCCCCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTaaataaat                            <  1:6077247/93‑1 (MQ=255)

                                                               aaGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑TCCCCCCC‑‑CCCCTGC‑CTTTTGTGCGCC‑CATACCCCCAAATTAAAAAAAGGTTTTaaataaat                            >  2:5119269/1‑93 (MQ=255)

                                                               aaGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑TC‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATg                           <  2:2268513/93‑1 (MQ=255)

                                                                agagTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑TC‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGa                          <  2:3125342/93‑1 (MQ=255)

                                                                  agTTTACTTTTCTGCGTTTCCAGG‑AT‑‑ACC‑C‑C‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAg                         <  2:378494/93‑1 (MQ=255)

                                                                  agTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑T‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCg                       <  2:2991174/93‑1 (MQ=255)

                                                                   gTTTCCTTTTCTGCATTTCCAGG‑ATCCC‑‑‑C‑C‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGc                        <  2:3280314/93‑1 (MQ=255)

                                                                      ttcTTTTCTGCATTTCCAGGAAT‑‑C‑‑‑CGC‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGtt                     <  2:589659/91‑1 (MQ=255)

                                                                      tACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑TCCCCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGtt                     <  1:2413592/93‑1 (MQ=255)

                                                                       tcTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑TCCCCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGttt                    <  1:1811083/92‑1 (MQ=255)

                                                                       aCTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑TC‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGtttt                   >  2:4071061/1‑93 (MQ=255)

                                                                        cTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑TCCCCCCC‑‑CCCCTGG‑CTATTTTGCGCT‑CATACACTCAAATTAAAATTAGGTCTTAAATAAATGAGCGtttt                   >  2:6058508/1‑93 (MQ=255)

                                                                        cTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑TCCCCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGtttt                   <  2:1360749/93‑1 (MQ=255)

                                                                            tCTGCATTTCCAGG‑AT‑‑T‑‑‑C‑TCCCCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGa               <  1:5107444/93‑1 (MQ=255)

                                                                            tCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑TC‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGAt              >  2:6031134/1‑93 (MQ=255)

                                                                              tGCATTTCCAGG‑AT‑‑A‑‑‑C‑TCCCCCCC‑‑CCCCTGG‑CCATTGTGCGCC‑TTTACATTCAACTTAAAGATAGGTTTTAAATAAAAGAGCGttttttatta             >  2:3983601/1‑89 (MQ=255)

                                                                               tcATTTCCAGG‑AT‑‑ACC‑C‑C‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAg            <  1:1103909/92‑1 (MQ=255)

                                                                                cATTTCCAGG‑AT‑‑G‑‑‑C‑TC‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTc          <  2:248976/93‑1 (MQ=255)

                                                                                cATTTCCAGG‑AT‑‑A‑‑‑C‑TCCCCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGt           <  1:322997/93‑1 (MQ=255)

                                                                                cATTTCCAGG‑AT‑‑A‑‑‑C‑TCCCCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGt           <  1:3484129/93‑1 (MQ=255)

                                                                                 ctttCCAGG‑AT‑‑C‑‑‑C‑T‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTa        <  1:1986690/92‑1 (MQ=255)

                                                                                 aTTTCCAGG‑AT‑‑A‑‑‑C‑TC‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCt         <  1:4516123/93‑1 (MQ=255)

                                                                                   ttCCAGG‑AT‑‑A‑‑‑C‑TCCCCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTa        <  1:229051/93‑1 (MQ=255)

                                                                                   ttCCAGG‑AT‑‑A‑‑‑C‑TC‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTAt       <  2:229655/93‑1 (MQ=255)

                                                                                    tCCAGG‑AT‑‑A‑‑‑C‑CCCCCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTAt       <  1:3698413/93‑1 (MQ=255)

                                                                                      cAGG‑AT‑‑A‑‑‑C‑TCCCCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTAttt     <  1:2837576/93‑1 (MQ=255)

                                                                                      cAGG‑AT‑‑A‑‑‑C‑TC‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTc    <  2:4030401/93‑1 (MQ=255)

                                                                                       aGG‑AT‑‑A‑‑‑C‑TCCCCCCC‑‑CCCCCGG‑CTTTTTTGCCCC‑CCTACACTCAAATTAAAAATAGGTTTTAAATAAATGAGCGTTTTTTTATATTCTAtttt    >  2:1640927/1‑92 (MQ=255)

                                                                                        gg‑AT‑‑A‑‑‑C‑TC‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCAt  >  2:4978539/1‑93 (MQ=255)

                                                                                        gg‑AT‑‑A‑‑‑C‑TC‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCAt  <  1:289963/93‑1 (MQ=255)

CGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGG‑AT‑‑A‑‑‑C‑T‑‑CCCCC‑‑CCCCTGG‑CTATTGTGCGCT‑CATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCAT  >  NC_000913/2460806‑2460985

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.