mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 13 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP012306 | = 643955 | 236 (0.820) | 70 (0.340) | 31/374 | 8.0 | 27.5% | noncoding (76/76 nt) | lysY | tRNA‑Lys |
| ? | AP012306 | 644386 = | 201 (0.980) | intergenic (+1/‑432) | lysQ/nadA | tRNA‑Lys/quinolinate synthase, subunit A | |||||
| * | ? | AP012306 | 3838727 = | 297 (1.030) | 10 (0.040) | 10/506 | 20.3 | 3.6% | coding (351/732 nt) | rlmB | 23S rRNA (Gm2251)‑methyltransferase |
| ? | AP012306 | 3838810 = | 250 (0.900) | coding (434/732 nt) | rlmB | 23S rRNA (Gm2251)‑methyltransferase | |||||
| * | ? | AP012306 | = 240678 | 256 (0.890) | 9 (0.030) | 9/510 | 21.0 | 3.6% | coding (919/1056 nt) | dinB | DNA polymerase IV |
| ? | AP012306 | = 240726 | 227 (0.810) | coding (967/1056 nt) | dinB | DNA polymerase IV | |||||
| * | ? | AP012306 | 1849979 = | 274 (0.950) | 6 (0.020) | 5/510 | 23.9 | 2.2% | coding (560/1026 nt) | yejE | predicted oligopeptide transporter subunit |
| ? | AP012306 | 1850015 = | 263 (0.940) | coding (596/1026 nt) | yejE | predicted oligopeptide transporter subunit | |||||
| * | ? | AP012306 | 2306900 = | 285 (0.990) | 4 (0.010) | 4/506 | 24.7 | 1.4% | coding (422/450 nt) | ygaU | predicted protein |
| ? | AP012306 | 2306921 = | 283 (1.020) | coding (401/450 nt) | ygaU | predicted protein | |||||
| * | ? | AP012306 | 1082924 = | 334 (1.160) | 4 (0.010) | 4/508 | 24.8 | 1.4% | coding (123/1797 nt) | narX | sensory histidine kinase in two‑component regulatory system with NarL |
| ? | AP012306 | 1083708 = | 262 (0.940) | coding (324/1392 nt) | narK | nitrate/nitrite transporter | |||||
| * | ? | AP012306 | = 750124 | 283 (0.980) | 4 (0.010) | 4/508 | 24.8 | 1.5% | intergenic (‑52/‑32) | ybjJ/ybjK | predicted transporter/predicted DNA‑binding transcriptional regulator |
| ? | AP012306 | = 750126 | 270 (0.970) | intergenic (‑54/‑30) | ybjJ/ybjK | predicted transporter/predicted DNA‑binding transcriptional regulator | |||||
| * | ? | AP012306 | = 189273 | 286 (0.990) | 4 (0.010) | 4/512 | 24.9 | 1.4% | intergenic (+52/‑70) | yaeT/hlpA | conserved protein/periplasmic chaperone |
| ? | AP012306 | = 189280 | 284 (1.010) | intergenic (+59/‑63) | yaeT/hlpA | conserved protein/periplasmic chaperone | |||||
| * | ? | AP012306 | = 2505427 | 242 (0.840) | 4 (0.010) | 4/516 | 25.0 | 1.7% | coding (12/444 nt) | ygeK | predicted DNA‑binding transcriptional regulator |
| ? | AP012306 | = 2507588 | 220 (0.780) | coding (586/2259 nt) | xdhA | xanthine dehydrogenase, molybdenum binding subunit | |||||
| * | ? | AP012306 | = 3281601 | 303 (1.050) | 3 (0.010) | 3/508 | 25.7 | 1.0% | coding (397/1689 nt) | ilvB | acetolactate synthase I, large subunit |
| ? | AP012306 | = 3289099 | 274 (0.980) | coding (231/1716 nt) | yidK | predicted transporter | |||||