mutation predictions | marginal predictions | summary statistics | genome diff | command line log
|
breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Predicted mutations | |||||
|---|---|---|---|---|---|
| evidence | position | mutation | annotation | gene | description |
| RA | 51,394 | C→A | V15F (GTC→TTC) | Cgl0049 ← | Hypothetical protein |
| RA | 274,977 | T→C | I204I (ATT→ATC) | Cgl0255 → | Catalase |
| RA | 364,912 | A→C | E363D (GAA→GAC) | Cgl0344 → | ATPases involved in chromosome partitioning |
| RA | 387,460 | T→C | *66* (TAA→TAG) | Cgl0365 ← | Hypothetical protein |
| RA | 501,579 | G→T | M1V (GTG→GTT) † | Cgl0479 → | PLP‑dependent aminotransferases |
| JC | 501,599 | (ACCGCAT)1→2 | coding (23/1347 nt) | Cgl0479 → | PLP‑dependent aminotransferases |
| RA | 517,141 | C→G | I216M (ATC→ATG) | Cgl0489 → | DNA‑directed RNA polymerase beta' subunit/160 kD subunit (split gene in archaea and Syn) |
| RA | 612,527 | C→A | R63L (CGC→CTC) | Cgl0599 ← | Hypothetical protein |
| RA | 671,707 | Δ1 bp | coding (8/957 nt) | Cgl0657 → | Uncharacterized protein involved in propionate catabolism |
| RA | 736,480 | T→C | V23A (GTG→GCG) | Cgl0716 → | Hypothetical protein |
| RA | 770,809 | G→A | L1112F (CTT→TTT) | Cgl0738 ← | Type II restriction enzyme, methylase subunits |
| RA | 1,279,070 | T→G | D461E (GAT→GAG) | Cgl1212 → | F0F1‑type ATP synthase beta subunit |
| RA | 1,751,737 | G→A | V81I (GTC→ATC) | Cgl1651 → | Hypothetical protein |
| RA | 1,903,814 | G→T | Q689K (CAA→AAA) | Cgl1795 ← | Hypothetical protein |
| RA | 2,022,287 | A→G | T8A (ACC→GCC) | Cgl1920 → | Mn‑dependent transcriptional regulator |
| RA | 2,029,483 | G→A | G103S (GGC→AGC) | Cgl1925 → | Transcriptional regulator |
| RA | 2,036,724 | A→C | intergenic (‑315/‑88) | Cgl1929 ← / → Cgl1930 | Hypothetical protein/SOS‑response transcriptional repressors (RecA‑mediated autopeptidases) |
| RA | 2,041,951 | G→T | G75V (GGT→GTT) | Cgl1934 → | Transcriptional regulators of sugar metabolism |
| RA | 2,058,943 | A→G | S160P (TCT→CCT) | Cgl1949 ← | 2‑methylthioadenine synthetase |
| RA | 2,060,507 | C→T | intergenic (+5/‑113) | Cgl1950 → / → Cgl1951 | ABC‑type transporter, ATPase component (glutamate)/ABC‑type transporter, periplasmic component (glutamate) |
| RA | 2,083,859 | T→A | G444G (GGA→GGT) | Cgl1975 ← | Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
| RA | 2,099,897 | T→C | intergenic (+79/‑343) | Cgl1988 → / → Cgl1990 | Hypothetical protein/ABC‑type transporter, periplasmic component |
| RA | 2,160,737 | C→T | P23L (CCT→CTT) | Cgl2047 → | Hypothetical protein |
| RA | 2,296,635 | (C)6→5 | coding (265/390 nt) | Cgl2168 ← | Hypothetical membrane protein |
| RA | 2,425,773 | G→A | F61F (TTC→TTT) | Cgl2292 ← | Coproporphyrinogen III oxidase and related FeS oxidoreductases |
| RA | 2,981,097 | C→T | L201L (CTG→CTA) | Cgl2796 ← | NAD‑dependent aldehyde dehydrogenases |
| RA | 3,155,328 | T→C | Q457Q (CAA→CAG) | Cgl2951 ← | Predicted transposase |
| RA | 3,156,189 | T→G | V170V (GTA→GTC) | Cgl2951 ← | Predicted transposase |
| RA | 3,260,510 | T→C | intergenic (‑425/‑620) | Cgl3058 ← / → Cgl3059 | Permeases of the major facilitator superfamily/Transcriptional regulator |
| RA | 3,286,754 | G→A | E44E (GAG→GAA) | Cgl3077 → | Hypothetical membrane protein |