| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NZ_CP025268 | 262,011 | Δ34,307 bp | ykfI–intF | 46 genes ykfI, yafW, ykfH, ykfG, yafX, ykfF, CXP41_RS01315, CXP41_RS01320, CXP41_RS01325, CXP41_RS01330, yafZ, ykfA, perR, CXP41_RS01355, CXP41_RS01360, CXP41_RS01365, ykfC, CXP41_RS01385, mmuP, mmuM, fbpC, CXP41_RS01405, CXP41_RS01410, CXP41_RS01410, CXP41_RS01420, CXP41_RS01425, yagB, CXP41_RS24560, yagA, yagE, yagF, yagG, yagH, xynR, argF, argL, CXP41_RS01470, CXP41_RS01480, CXP41_RS01480, CXP41_RS01490, yagK, yagL, CXP41_RS01505, ykgV, CXP41_RS01515, intF |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NZ_CP025268 | 262011 | 296317 | 34307 | 711 [2] | [10] 721 | ykfI–intF | ykfI,yafW,ykfH,ykfG,yafX,ykfF,CXP41_RS01315,CXP41_RS01320,CXP41_RS01325,CXP41_RS01330,yafZ,ykfA,perR,CXP41_RS01355,CXP41_RS01360,CXP41_RS01365,ykfC,CXP41_RS01385,mmuP,mmuM,fbpC,CXP41_RS01405,CXP41_RS01410,CXP41_RS01410,CXP41_RS01420,CXP41_RS01425,yagB,CXP41_RS24560,yagA,yagE,yagF,yagG,yagH,xynR,argF,argL,CXP41_RS01470,CXP41_RS01480,CXP41_RS01480,CXP41_RS01490,yagK,yagL,CXP41_RS01505,ykgV,CXP41_RS01515,intF |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP025268 | = 262010 | 2 (0.000) | 411 (1.140) | 81/154 | 0.2 | 99.9% | intergenic (+11/+371) | CXP41_RS01280/ykfI | tRNA‑Thr/type IV toxin‑antitoxin system toxin YkfI |
| ? | NZ_CP025268 | 296318 = | 0 (0.000) | intergenic (‑170/+115) | intF/CXP41_RS01530 | integrase family protein/LysR substrate‑binding domain‑containing protein | |||||
Only 100 of 711 total aligned reads displayed.
TTAGTTTTAACCTTGTCCACCGTGATTCACGTTCGTGAACATGTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTATCAACGAAGATCAATCTTATCTACTGACCAAAAAGGCCTGATAGGGCTTCGCTCACTATACATCC > NZ_CP025268/261871‑262148 | ccTTGTCCACCGTGATTCACGTTCGTGAACATGTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttacccc > 1:6092593‑M1/1‑130 (MQ=255) ccTTGTCCACCGTGATTCACGTTCGTGAACATGTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttacccc > 2:9656582‑M1/1‑130 (MQ=255) cTTGTCCACCGTGATTCACGTTCGTGAACATGTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttacccca < 1:8220406‑M1/140‑12 (MQ=255) cTTGTCCACCGTGATTCACGTTCGTGAACATGTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttacccca < 2:1160881‑M1/140‑12 (MQ=255) cTTGTCCACCGTGATTCACGTTCGTGAACATGTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttacccca < 1:3059889‑M1/140‑12 (MQ=255) tGTCCACCGTGATTCACGTTCGTGAACATGTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccata < 2:2338270‑M1/140‑14 (MQ=255) tGTCCACCGTGATTCACGTTCGTGAACATGTCCATTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccata < 1:8778279‑M1/140‑14 (MQ=255) agaccaccGTGATTCACGTTCGTGAACATGTCCTTTCAGGGCCGAGATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAATGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccata < 2:8573531‑M1/137‑14 (MQ=255) gTCCACAGTGATTCACGTTCGTGACCATTTCCTTTCAGGGCAGATATAGCTCAGTTGGTCGAGCAGCGCATTCGAAATGCGAAGGTCGTAGGTTCGCCGCCTAGTATCGGCCCCATTATAATCAAAGAGTTAccacatct > 2:10489515/1‑133 (MQ=21) ccACCGTGATTCACGTTCGTGAACATGTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatattt < 1:2612008‑M1/140‑17 (MQ=255) cACCGTGATTCACGTTCGTGAACATGTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatattta < 2:478003‑M1/140‑18 (MQ=255) cACCGTGATTCACGTTCGTGAACATGTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatattta < 2:7779690‑M1/140‑18 (MQ=255) aCCGTGATTCACGTTCGTGAACATGTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaa < 1:4211824‑M1/140‑19 (MQ=255) cGTGATTCACGTTCGTGAACATGTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaat > 1:6830154‑M1/1‑120 (MQ=255) cGTGATTCACGTTCGTGAACATGTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaat > 1:9069355‑M1/1‑120 (MQ=255) aTTCACGTTCGTGAACATGTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacac < 1:4403800‑M1/140‑25 (MQ=255) aTTCACGTTCGTGAACATGTCCTTTCAGGGCCGATATAGCTCAGTGGGTAGCGCAGCGCATTCGTACTGCGAAGGTCGTAGGTTCGACTCCTCTTATCGGCACCATTAAAATCAAAgagttaccccatatttaaagccac < 2:926406‑M1/140‑25 (MQ=255) ttCACGTTCGTGAACATGTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacacc < 1:10426432‑M1/140‑26 (MQ=255) ttCACGTTCGTGAACATGTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacacc < 1:5684280‑M1/140‑26 (MQ=255) ttCACGTTCGTGAACATGTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacacc < 1:1296126‑M1/140‑26 (MQ=255) ttCACGTTCGTGAACATGTCCTTTCAGGGCCGATAGAGCTCAGTGGGTAGAGCCGCGCATTCGTAATGCGAAGGACGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacagc < 2:6666957‑M1/140‑26 (MQ=255) cACGTTCGTGAACATGTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccac < 2:5156087‑M1/140‑28 (MQ=255) cGTTCGTGAACATGTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagtaaccccatatttaaatacaccacgt > 1:2874870‑M1/1‑111 (MQ=255) tCGTGAACATGTCCTTTCAGGGCCGATATAGCTCAGTGGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatagttaaatacaccacgtgtc > 2:6169819‑M1/1‑108 (MQ=255) cGTGAACATGTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcc > 1:2153122‑M1/1‑107 (MQ=255) tGAACATGTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctc > 1:1455223‑M1/1‑105 (MQ=255) tGAACATGTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctc < 2:10784730‑M1/140‑36 (MQ=255) tGAACATGTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctc < 2:2924997‑M1/140‑36 (MQ=255) aaCATGTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcct < 2:8145509‑M1/140‑38 (MQ=255) cATGTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgt > 2:1510747‑M1/1‑101 (MQ=255) aTGTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtg > 1:7151413‑M1/1‑100 (MQ=255) ggccttTCAGGGCCGAGATAGCTCATTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCTACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctccggtgcc < 2:6562450‑M1/138‑43 (MQ=255) gTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgcc < 1:7555671‑M1/140‑43 (MQ=255) gTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgcc > 1:10179440‑M1/1‑98 (MQ=255) gTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgcc < 1:9391672‑M1/140‑43 (MQ=255) gTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgcc > 2:1694322‑M1/1‑98 (MQ=255) gggCCGATCGAGCTCAGTTGGGAGAGCAGCGCAATCGTAATGCGACGGTCGTCGGTTCGACTCCTAGGATCGGCACCATTAAAATCAACgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtg < 2:4242068‑M1/140‑52 (MQ=255) gggCCGATATAGCTCAGTTGTTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgatttacccaatatttaaatacaccacgtttcctcctgtgccgtatttgtg < 2:10466071‑M1/140‑52 (MQ=255) ggCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgc > 2:3763256‑M1/1‑88 (MQ=255) cGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccat > 2:3165274‑M1/1‑85 (MQ=255) gATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccatt < 1:9800338‑M1/140‑57 (MQ=255) tataGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgt < 1:8069150‑M1/140‑59 (MQ=255) gCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaacc > 1:5219261‑M1/1‑78 (MQ=255) cTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaacct > 1:1665274‑M1/1‑77 (MQ=255) cTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgc > 2:1891205‑M1/1‑77 (MQ=255) tCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaacctt > 2:5031300‑M1/1‑76 (MQ=255) tCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaacctt < 2:2032474‑M1/140‑65 (MQ=255) tCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaacctt > 2:7059598‑M1/1‑76 (MQ=255) ttGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggca > 2:3926795‑M1/1‑72 (MQ=255) ttGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggca > 1:230717‑M1/1‑72 (MQ=255) tGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaa < 1:9946166‑M1/140‑70 (MQ=255) gTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaatt < 1:4999153‑M1/140‑72 (MQ=255) agagCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattca < 1:1806125‑M1/140‑74 (MQ=255) gcgcagcgcATTCGTAATGCGACGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgggccgtatttgtgccattgtaaccttggcaattcat < 2:5907568‑M1/138‑75 (MQ=255) gagCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcat < 2:8020345‑M1/140‑75 (MQ=255) gagCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcat > 2:8948007‑M1/1‑66 (MQ=255) gcagcGCATTCGTAATGCGAAGGTCGTAGGTTCTAATCCTATTATCGGCACCATTAAAATCAAAgattgaccccagattgaaatacaccacgtgtcctcctgtgccgtatttgtgccattgtaaccttggcaattcctca < 2:9465411‑M1/140‑77 (MQ=255) gcagcGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctactgtgccgtagttgtgccattgtaaccttggcaattcatca > 2:4622732‑M1/1‑64 (MQ=255) agcGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCCCCATTAAAATCAAAgagttaccccagatttaaatacaccacgtttccgcctgtgccgtagttgtgccagtgtaaccttggcaattcatcaaa > 2:5437994‑M1/1‑62 (MQ=255) cgcATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaat > 1:9661421‑M1/1‑60 (MQ=255) cgcATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaat > 1:6335994‑M1/1‑60 (MQ=255) cgcATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttacaccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaat > 2:4403304‑M1/1‑60 (MQ=255) gcATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaata < 2:9069355‑M1/140‑82 (MQ=255) cATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatac > 1:10564973‑M1/1‑58 (MQ=255) cATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccagatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatac > 1:3945062‑M1/1‑58 (MQ=255) gTAATGCGACGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatactgttc < 2:559504‑M1/140‑88 (MQ=255) gTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatactgttc < 1:1155011‑M1/140‑88 (MQ=255) gTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatactgttc < 1:6978006‑M1/140‑88 (MQ=255) gTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatactgttc > 1:3568918‑M1/1‑53 (MQ=255) gTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatactgttc < 2:2167576‑M1/140‑88 (MQ=255) gTAATGCGAAGGTCGTAGGTTCGACTCCTATTAGCGGCACCATTAAAATCACAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatactgttc < 2:2443575‑M1/140‑88 (MQ=255) aTGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatactgttctga > 2:7429616‑M1/1‑50 (MQ=255) gCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatactgttctgaca < 2:8405602‑M1/140‑93 (MQ=255) cGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatactgttctgacat > 1:7293318‑M1/1‑47 (MQ=255) cagGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtgtcctccggtgccgtatttgtgccattgtaaccttggcaattcatcaaaatactgttctgacatca < 1:5960637‑M1/139‑96 (MQ=255) aaGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtacccttggcaattcatcaaaatactgttctgacatca > 2:9810132‑M1/1‑45 (MQ=255) ggTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatactgttctgacatcagg < 1:3663516‑M1/140‑98 (MQ=255) ggTCGTAGGTTCGACTCCAAATATCGGCACCATTAAAATCAACgagttaccccatatttaaataccccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatactgttctgacatcagg < 2:4816766‑M1/140‑98 (MQ=255) gTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatactgttctgacatcaggcagt > 1:10059211‑M1/1‑39 (MQ=255) ttCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgcaagtgtaacctttgcttttcataaaaatactgttctgacctcaggcagtgcagg > 2:6321418‑M1/1‑34 (MQ=255) tattatCGGCACCATTAAAATCAAAgaggtaccccatatttaaatacaccacgtttcctcctgggccgtattggtgccagtgtaaccttggccattcatcaaaatactgttctgacatcaggcagtgcaggtgcagacag > 2:2693686‑M1/1‑25 (MQ=255) attatCGGCACCATTAAAATCAAAgagttaccccatatttaaataccccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatactgttctgacatcaggcagtgcaggtgcagacatt < 1:6647591‑M1/140‑117 (MQ=255) attatCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatactgttctgacatcaggcagtgcaggtgcagacatt > 2:345644‑M1/1‑24 (MQ=255) attatCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatactgttctgacatcaggcagtgcaggtgcagacatt < 1:3190030‑M1/140‑117 (MQ=255) attatCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatactgttctgacatcaggcagtgcaggtgcagacatt > 1:5401339‑M1/1‑24 (MQ=255) tCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatactgttctgacatcaggcagtgcaggtgcagacatttaag > 2:3098643‑M1/1‑20 (MQ=255) cGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatactgttctgacatcaggcagtgcaggtgcagacatttaagc < 1:3340660‑M1/140‑122 (MQ=255) cACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatactgttctgacatcaggcagtgcaggtgcagacatttaagccaa > 2:7229622‑M1/1‑16 (MQ=255) cACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatactgttctgacatcaggcagtgcaggtgcagacatttaagccaa > 1:7766219‑M1/1‑16 (MQ=255) cACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatactgttctgacatcaggcagtgcaggtgcagacatttaagccaa > 1:4803884‑M1/1‑16 (MQ=255) cACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaata > 2:10268384‑M1/1‑16 (MQ=255) cATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatactgttctgacatcaggcagtgcaggtgcagacatttaagccaattg > 1:885468‑M1/1‑13 (MQ=255) ttAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatactgtt > 2:7607001‑M1/1‑11 (MQ=255) aTCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatactgttctgacatcaggcagtgcaggtgcagacatttaagccaattgctgccgc > 2:10096549‑M1/1‑6 (MQ=255) tCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatactgttctgacatcaggcagtgcaggtgcagacatttaagccaattgctgccgcc < 1:8685443‑M1/140‑136 (MQ=255) tCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccggatttgtgccattgtaaccttggcaattcatcaaaatactgttctgacatcaggcagtgcaggtgcagacatttaagccaattgctgccgcc < 1:7443462‑M1/140‑136 (MQ=255) aaagagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatactgttctgacatcaggcagtgcaggtgcagacatttaagccaattgctgccgccat > 1:7613404‑M1/1‑3 (MQ=255) aaagagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatactgttctgacatcaggcagtgcaggtgcagacatttaagccaattgctgccgccat > 1:4628510‑M1/1‑3 (MQ=255) aaagagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatactgttc < 2:1331114‑M1/90‑88 (MQ=255) aagagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatactgttctgacatcaggcagtgcaggtgcagacatttaagccaattgctgccgccata > 1:10830392‑M1/1‑2 (MQ=255) | TTAGTTTTAACCTTGTCCACCGTGATTCACGTTCGTGAACATGTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTATCAACGAAGATCAATCTTATCTACTGACCAAAAAGGCCTGATAGGGCTTCGCTCACTATACATCC > NZ_CP025268/261871‑262148 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |