| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,743,496 | IS5 (–) +4 bp | coding (40‑43/1374 nt) | mdtK → | multidrug efflux pump MdtK |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1743496 = | 0 (0.000) | 624 (1.480) | 152/192 | 0.2 | 100% | coding (40/1374 nt) | mdtK | multidrug efflux pump MdtK |
| ? | NC_000913 | = 2290113 | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | = 1743499 | 0 (0.000) | 669 (1.590) | 159/192 | 0.1 | 100% | coding (43/1374 nt) | mdtK | multidrug efflux pump MdtK |
| ? | NC_000913 | 2101749 = | NA (NA) | noncoding (1195/1195 nt) | IS5 | repeat region | |||||
Only 100 of 624 total aligned reads displayed.
CGCCATGTCGGTGG‑CACTATAGCCGCCCGCCATCACGGTATCGACAAAACCCATCGCAGTTTGGGCGATTTGCGCGAGAATCACCGGGATTGCTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1743591‑1743496‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACA < NC_000913/2290113‑2290018 CATGTCGGTGG‑CACTATAGCCGCCCGCCATCACGGTATCGACAAAACCCATCGCAGTTTGGGCGCTTTGCGCGAGAATCACCGGGATTGCTAAGGAA > 1:3021362/1‑97 CATGTCGGTGG‑CACTATAGCCGCCCGCCATCACGGTATCGACAAAACCCATCGCAGTTTGGGCGATTTGCGCGAGAATCACCGGGATTGCTAAGGAA > 1:1501279/1‑97 CATGTCGGTGG‑CACTATAGCCGCCCGCCATCACGGTATCGACAAAACCCATCGCAGTTTGGGCGATTTGCGCGAGAATCACCGGGATTGCTAAGGAA > 1:21032752/1‑97 GTCGGTGG‑CACTATAGCCGCCCGCCATCACGGTATCGACAAAACCCATCGCAGTTTGGGCGATTTGCGCGAGAATCACCGGGATTGCTAAGGAAGGT > 1:2738138/1‑97 gGGTGGCCACGATACCCCCCCGCCATCACGGTATCGACAAAACCCATCGCAGTTTGGGCGATTTGCGCGAGAATCACCGGGATTGCTAAGGAAGGTG < 1:7205860/96‑1 GTGG‑CACTATAGCCGCCCGCCATCACGGTATCGACAAAACCCATCGCAGTTTGGGCGATTTGCGCGAGAATCACCGGGATTGCTAAGGAAGGTGCGA > 1:10415063/1‑97 nG‑CACTATAGCCGCCCGCCATCACGGTATCGACAAAACCCATCGCAGTTTGGGCGATTTGCGCGAGAATCACCGGGATTGCTAAGGAAGGTGCGAAC > 1:12132371/2‑97 GG‑CACTATAGCCGCCCGCCATCACGGTATCGACAAAACCCATCGCAGTTTGGGCGATTTGCGCGAGAATCACCGGGATTGCTAAGGAAGGTGCGAAC > 1:3862474/1‑97 ACTATAGCCGCCCGCCATCACGGTATCGACAAAACCCATCGCAGTTTGGGCGATTTGCGCGAGAATCACCGGGATTGCTAAGGAAGGTGCGAACAAG > 1:4211918/1‑97 ACTATAGCCGCCCGCCATCACGGTATCGACAAAACCCATCGCAGTTTGGGCGATTTGCGCGAGAATCACCGGGATTGCTAAGGAAGGTGCGAACAAG > 1:18812794/1‑97 ATAGCCGCCCGCCATCACGGTATCGACAAAACCCATCGCAGTTTGGGCGATTTGCGCGAGAATCACCGGGATTGCTAAGGAAGGTGCGAACAAGTCC > 1:17789760/1‑97 TAGCCCCCCGCCATCACGGTATCGACAAAACCCATCGCAGTTTGGGCGATTTGCGCGAGAATCACCGGGATTGCTAAGGAAGGTGCGAACAAGTCCC < 1:14344610/97‑1 GCCCCCCGCCATCACGGTATCGACAAAACCCATCGCAGTTTGGGCGATTTGCGCGAGAATCACCGGGATTGCTAAGGAAGGTGCGAACAAGTCCCTG < 1:18588785/97‑1 CCGCCCGCCATCACGGTATCGACAAAACCCATCGCAGTTTGGGCGATTTGCGCGAGAATCACCGGGATTGCTAAGGAAGGTGCGAACAAGTCCCTGA < 1:18198008/97‑1 ccCCCCCCATCACGGTATCGACAAAACCCATCGCAGTTTGGGCGATTTGCGCGAGAATCACCGGGATTGCTAAGGAAGGTGCGAACAAGTCCCTGAT < 1:11874414/95‑1 GCCCGCCATCACGGTATCGACAAAACCCATCGCAGTTTGGGAGATTTGCGCGAGAATCACCGGGATTGCTAAGGAAGGTGCGAACAAGTCCCTGATA > 1:10902216/1‑97 CCCGCCATCACGGTATCGACAAAACCCATCGCAGTTTGGGCGATTTGCGCGAGAATCACCGGGATTGCTAAGGAAGGTGCGAACAAGTCCCTGATAT > 1:7588103/1‑97 CGCCATCACGGTATCGACAAAACCCATCGCAGTTTGGGCGATTTGCGCGAGAATCACCGGGATTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGA < 1:18038872/97‑1 CGCCATCACGGTATCGACAAAACCCATCGCAGTTTGGGCGATTTGCGCGAGAATCACCGGGATTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGA < 1:11445145/97‑1 gcaATCACGGTATCGACAAAACCCATCGCAGTTTGGGCGATTTGCGCGAGAATCACCGGGATTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAG < 1:3261438/94‑1 GCCATCACGGTATCGACAAAACCCATCGCAGTTTGGGCGATTTGCGCGAGAATCACCGGGATTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAG < 1:3144951/97‑1 GCCATCACGGTATCGACAAAACCCATCGCAGTTTGGGCGATTTGCGCGAGAATCACCGGGATTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAG > 1:18992715/1‑97 CCATCACGGTATCGACAAAACCCATCGCAGTTTGGGCGATTTGCGCGAGAATCACCGGGATTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGA < 1:20158116/97‑1 ATCACGGTATCGACAAAACCCATCGCAGTTTGGGCGATTTGCGCGAGAATCACCGGGATTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATC > 1:20812189/1‑97 TCACGGTATCGACAAAACCCATCGCAGTTTGGGCGATTTGCGCGAGAATCACCGGGATTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCA < 1:19725741/97‑1 CACGGTATCGACAAAACCCATCGCAGTTTGGGCGATTTGCGCGAGAATCACCGGGATTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCAT < 1:796916/97‑1 CACGGTATCGACAAAACCCATCGCAGTTTGGGCGATTTGCGCGAGAATCACCGGGATTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCAT < 1:7405880/97‑1 ACGGTATCGACAAAACCCATCGCAGTTTGGGCGATTTGCGCGAGAATCACCGGGATTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATG < 1:8633498/97‑1 ACGGTATCGACAAAACCCATCGCAGTTTGGGCGATTTGCGCGAGAATCACCGGGATTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATG > 1:6898183/1‑97 ACGGTATCGACAAAACCCATCGCAGTTTGGGCGATTTGCGCGAGAATCACCGGGATTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATG < 1:12745085/97‑1 CGGTATCGACAAAACCCATCGCAGTTTGGGCGATTTGCGCGAGAATCACCGGGATTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGT < 1:12848941/97‑1 GGTATCGACAAAACCCATCGCAGTTTGGGCGATTTGCGCGAGAATCACCGGGATTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTT < 1:1532851/97‑1 GGTATCGACAAAACCCATCGCAGTTTGGGCGATTTGCGCGAGAATCACCGGGATTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATAATGTT < 1:2224816/97‑1 GTATCGACAAAACCCATCGCAGTTTGGGCGATTTGCGCGAGAATCACCGGGATTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTT > 1:889822/1‑97 ATCGACAAAACCCATCGCAGTTTGGGCGATTTGCGCGAGAATCACCGGGATTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGT < 1:4418049/97‑1 ATCGACAAAACCCATCGCAGTTTGGGCGATTTGCGCGAGAATCACCGGGATTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGT > 1:592291/1‑97 ATCGACAAAACCCATCGCAGTTTGGGCGATTTGCGCGAGAATCACCGGGATTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGT > 1:6211613/1‑97 CGACAAAACCCATCGCAGTTTGGGCGATTTGCGCGAGAATCACCGGGATTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCA < 1:13548703/97‑1 CGACAAAACCCATCGCAGTTTGGGCGATTTGCGCGAGAATCACCGGGATTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCA < 1:15717664/97‑1 AAAACCCATCGCAGTTTGGGCGATTTGCGCGAGAATCACCGGGATTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTG < 1:19914095/97‑1 AAAACCCATCGCAGTTTGGGCGATTTGCGCGAGAATCACCGGGATTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTG > 1:243467/1‑97 AACCCATCGCAGTTTGGGCGATTTGCGCGAGAATCACCGGGATTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGA < 1:20644232/97‑1 ACCCATCGCAGTTTGGGCGATTTGCGCGAGAATCACCGGGATTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAG > 1:9511408/1‑97 CCATCGCAGTTTGGGCGATTTGCGCGAGAATCACCGGGATTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCC < 1:20331862/97‑1 TCGCAGTTTGGGCGATTTGCGCGAGAATCACCGGGATTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATA > 1:15130532/1‑97 TTGGGCGATTTGCGCGAGAATCACCGGGATTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGG > 1:17890102/1‑97 TTGGGCGATTTGCGCGAGAATCACCGGGATTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGG < 1:16268437/97‑1 GCGATTTGCGCGAGAATCACCGGGATTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTC > 1:10218232/1‑97 CGATTTGCGCGGGATTCACCGGGATTCCTAAGGAAGGTGTGAACAGGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCA < 1:17683761/97‑1 CGATTTGCGCGAGAATCACCGGGATTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCA < 1:8011249/97‑1 TTTGCGCGAGAATCACCGGGATTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCA < 1:6718754/97‑1 TTGCGCGAGAATCACCGGGATTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCAT > 1:9246664/1‑97 CGCGAGAATCACCGGGATTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAG < 1:4664870/97‑1 gaGAGAATCCCCGGGATTGCTAAGGAAGGTGCGAACAAGTCCCGGATTTGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGT < 1:5375069/95‑1 CGAGAATCACCGGGATTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTC > 1:15967429/1‑97 CGAGAATCACCGGGATTGCTAAGGAAGGTGCGAACAAGGCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTC < 1:4912673/97‑1 GAGAATCACCGGGATTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCA > 1:18346432/1‑97 GAGAATCACCGGGATTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCA > 1:16901357/1‑97 GAGAATCACCGGGATTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCA < 1:13202939/97‑1 AGAATCACCGGGATTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCAT > 1:15874173/1‑97 CACCGGGATTGCTAAGGAAGGGGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACT > 1:2077713/1‑97 CCGGGATTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTA > 1:9783872/1‑97 CCGGGATTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTA < 1:10029158/97‑1 GGATTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCT > 1:17038624/1‑97 TGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGC > 1:6415684/1‑97 GCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCC < 1:11721813/97‑1 GCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCC > 1:13832175/1‑97 GCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCC > 1:14127122/1‑97 CTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCG > 1:4097509/1‑97 CTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCG > 1:12619151/1‑97 CTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCG > 1:20445019/1‑97 CTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCG > 1:2649177/1‑97 CTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCG < 1:16717542/97‑1 TAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGA > 1:11215061/1‑97 TAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGA > 1:8275604/1‑97 TAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGA > 1:811542/1‑97 TAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGA > 1:17291296/1‑97 TAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGA > 1:7778853/1‑97 TAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGA > 1:12366453/1‑97 TAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGA > 1:1301553/1‑97 TAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGA > 1:6768470/1‑97 TAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGA > 1:9652982/1‑97 TAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGA > 1:14729490/1‑97 TAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGA > 1:3374371/1‑97 TAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGA > 1:3683623/1‑97 gAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGAC > 1:10563595/2‑97 AAGGAATGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGAC < 1:14586542/97‑1 AAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGAC > 1:16438265/1‑97 AAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGAC < 1:13410988/97‑1 AAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGAC > 1:558841/1‑97 AAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGAC > 1:7316803/1‑97 AAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGAC < 1:1486436/97‑1 AAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGAC > 1:17519335/1‑97 AAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGAC > 1:8435199/1‑97 AGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACA > 1:19471049/1‑97 AGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACA > 1:12237882/1‑97 AGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACA > 1:6832983/1‑97 AGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACA > 1:15437820/1‑97 AGGAAGGTGCGAACAAGTCCATGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACA < 1:5220738/97‑1 AGGAAGGGGCGAAAAAGCCCCTGATATGAGATCATTTTTGTCATCGGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACA < 1:19300844/97‑1 CGCCATGTCGGTGG‑CACTATAGCCGCCCGCCATCACGGTATCGACAAAACCCATCGCAGTTTGGGCGATTTGCGCGAGAATCACCGGGATTGCTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1743591‑1743496‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACA < NC_000913/2290113‑2290018 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |