| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,743,496 | IS5 (–) +4 bp | coding (40‑43/1374 nt) | mdtK → | multidrug efflux pump MdtK |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1743496 = | 0 (0.000) | 624 (1.480) | 152/192 | 0.2 | 100% | coding (40/1374 nt) | mdtK | multidrug efflux pump MdtK |
| ? | NC_000913 | = 2290113 | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | = 1743499 | 0 (0.000) | 669 (1.590) | 159/192 | 0.1 | 100% | coding (43/1374 nt) | mdtK | multidrug efflux pump MdtK |
| ? | NC_000913 | 2101749 = | NA (NA) | noncoding (1195/1195 nt) | IS5 | repeat region | |||||
Only 100 of 1175 total aligned reads displayed.
CCCATTCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCG > NC_000913/1743403‑1743594 | cggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAg > 1:7451266‑M1/94‑97 (MQ=255)cggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAg > 1:7234419‑M1/94‑97 (MQ=255)cccATTCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTattagcattag > 1:12864486/1‑97 (MQ=255) ggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGc > 1:14127122‑M1/93‑97 (MQ=255) ggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGc > 1:17441971‑M1/93‑97 (MQ=255) cgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCaa < 1:9820397‑M1/7‑1 (MQ=255) cgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCaa < 1:18023814‑M1/7‑1 (MQ=255) ttCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaa > 1:3476850‑M1/1‑93 (MQ=255) tCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaag < 1:12293308‑M1/97‑6 (MQ=255) ggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATccc > 1:15104434‑M1/87‑97 (MQ=255) taagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCgg < 1:10029158‑M1/13‑1 (MQ=255) aagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGt > 1:9256575‑M1/84‑97 (MQ=255) agttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTg > 1:7065523‑M1/83‑97 (MQ=255) tttttAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaata < 1:4387830‑M1/97‑15 (MQ=255) tgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGAtt > 1:824230‑M1/80‑97 (MQ=255) atgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATtct > 1:20648945‑M1/78‑97 (MQ=255) atgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATtct > 1:1018137‑M1/78‑97 (MQ=255) gTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggg > 1:8752136‑M1/1‑77 (MQ=255) tctctcATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcgggg < 1:19266976‑M1/97‑22 (MQ=255) tctctcATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcgggg < 1:16314441‑M1/97‑22 (MQ=255) gatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAAt < 1:16661018‑M1/29‑1 (MQ=255) atgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATc > 1:17672286‑M1/68‑97 (MQ=255) atatAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattc > 1:8906842‑M1/1‑70 (MQ=255) tataACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattct > 1:17281959‑M1/1‑69 (MQ=255) cctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCaa > 1:17890102‑M1/62‑97 (MQ=255) ctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCaaa < 1:9624610‑M1/37‑1 (MQ=255) cTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcg > 1:14500161‑M1/1‑64 (MQ=255) tgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAAc > 1:10401940‑M1/60‑97 (MQ=255) tACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCATCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcgg < 1:19802749‑M1/97‑35 (MQ=255) gttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACt > 1:13100844‑M1/59‑97 (MQ=255) ttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTg > 1:8560237‑M1/58‑97 (MQ=255) cAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggct < 1:12497513‑M1/97‑37 (MQ=255) cAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaactcttctcggct < 1:4079293‑M1/97‑37 (MQ=255) tctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGc < 1:6337761‑M1/41‑1 (MQ=255) tctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGc < 1:14753824‑M1/41‑1 (MQ=255) ctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCg < 1:2948047‑M1/42‑1 (MQ=255) tAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctggat > 1:18854850‑M1/1‑57 (MQ=255) tccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGtt > 1:6733598‑M1/49‑97 (MQ=255) ggTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtc > 1:16887418‑M1/1‑52 (MQ=255) tgtTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcct > 1:13298934‑M1/1‑50 (MQ=255) tgtTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcat < 1:18482109‑M1/97‑48 (MQ=255) cagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGtttt > 1:4565917‑M1/47‑97 (MQ=255) gatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGt > 1:4204280‑M1/45‑97 (MQ=255) gatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGt < 1:11089724‑M1/53‑1 (MQ=255) gatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGt > 1:15849723‑M1/45‑97 (MQ=255) tgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCg > 1:14891060‑M1/43‑97 (MQ=255) aCGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcat < 1:15949231‑M1/97‑53 (MQ=255) aCGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcat > 1:11248010‑M1/1‑45 (MQ=255) aCGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcat > 1:6506907‑M1/1‑45 (MQ=255) gTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcattt < 1:15321909‑M1/97‑55 (MQ=255) gCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttct < 1:15573562‑M1/97‑57 (MQ=255) gCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttct < 1:3874828‑M1/97‑57 (MQ=255) cAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttctt > 1:7587381‑M1/1‑40 (MQ=255) catgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGt < 1:19645311‑M1/62‑1 (MQ=255) aGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttc < 1:5782808‑M1/97‑59 (MQ=255) gAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttca < 1:20145036‑M1/97‑60 (MQ=255) gTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgt > 1:6903603‑M1/1‑35 (MQ=255) gTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgt < 1:2682631‑M1/97‑63 (MQ=255) atctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATg > 1:5927324‑M1/32‑97 (MQ=255) tctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATgg > 1:4894167‑M1/31‑97 (MQ=255) tataTCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtt < 1:16184218‑M1/97‑64 (MQ=255) atatCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgttt < 1:1646251‑M1/97‑65 (MQ=255) tcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATggcg < 1:11445145‑M1/69‑1 (MQ=255) catatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATggcgg > 1:17086079‑M1/28‑97 (MQ=255) atcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGatggcggggg < 1:12168860‑M1/73‑3 (MQ=255) aGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagcc > 1:17805153‑M1/1‑28 (MQ=255) gggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGcgggcggcca < 1:20386876‑M1/77‑3 (MQ=255) aaGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatt > 1:12047463‑M1/1‑24 (MQ=255) ggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCtat > 1:3294232‑M1/20‑97 (MQ=255) cgcgTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttt < 1:3678485‑M1/97‑77 (MQ=255) gTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttct < 1:11726018‑M1/97‑80 (MQ=255) gTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttct < 1:20471130‑M1/97‑80 (MQ=255) tcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCAc > 1:2456611‑M1/12‑97 (MQ=255) gTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccg < 1:781531‑M1/97‑84 (MQ=255) gcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGGGGGTTTAGTGCGACCg < 1:20789696‑M1/88‑1 (MQ=255) tattaGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgta > 1:20272837‑M1/1‑12 (MQ=255) attaGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaa < 1:20986171‑M1/97‑87 (MQ=255) taGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgcttttttctcccgtaaat > 1:8412636‑M1/1‑9 (MQ=255) taGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaat < 1:10901396‑M1/97‑89 (MQ=255) ccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGGGATAGGGCCCCCCACATGGc < 1:7990927‑M1/95‑1 (MQ=255) aTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcct < 1:9130705‑M1/97‑93 (MQ=255) aTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcct > 1:18666240‑M1/1‑5 (MQ=255) ttAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcctt < 1:13642661‑M1/97‑94 (MQ=255) ttAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcctt < 1:14379458‑M1/97‑94 (MQ=255) ttAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcctt > 1:12694471‑M1/1‑4 (MQ=255) ttAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcctt < 1:19485264‑M1/97‑94 (MQ=255) ttAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcctt < 1:19917757‑M1/97‑94 (MQ=255) tagcaATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATggcggc < 1:18198070/97‑1 (MQ=255) tagcaATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATggcggc < 1:51261/97‑1 (MQ=255) tagcaATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATggcggc < 1:6180452/97‑1 (MQ=255) tagcaATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATggcggc < 1:9502769/97‑1 (MQ=255) tAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttg < 1:215348‑M1/97‑95 (MQ=255) tAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttg < 1:2302914‑M1/97‑95 (MQ=255) tAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttg > 1:3096094‑M1/1‑3 (MQ=255) tAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttg > 1:533088‑M1/1‑3 (MQ=255) tAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttg < 1:10586746‑M1/97‑95 (MQ=255) aGggaaggtgcgaataagcggggaaattcttctcggctgactccgtcatttcatttcttcatgtttgagccgattttttctcccgcaaatgccttga > 1:13478216‑M1/1‑2 (MQ=255) aGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttga > 1:19074754‑M1/1‑2 (MQ=255) aGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttga < 1:13913370‑M1/97‑96 (MQ=255) aGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttga < 1:5497240‑M1/97‑96 (MQ=255) | CCCATTCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCG > NC_000913/1743403‑1743594 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |