Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,743,496 IS5 (–) +4 bp coding (40‑43/1374 nt) mdtK → multidrug efflux pump MdtK

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1743496 =0 (0.000)624 (1.480) 152/192 0.2 100% coding (40/1374 nt) mdtK multidrug efflux pump MdtK
?NC_000913 = 2290113 NA (NA)noncoding (1/1195 nt) IS5 repeat region
* ? NC_000913 = 17434990 (0.000)669 (1.590) 159/192 0.1 100% coding (43/1374 nt) mdtK multidrug efflux pump MdtK
?NC_000913 2101749 = NA (NA)noncoding (1195/1195 nt) IS5 repeat region

Only 100 of 669 total aligned reads displayed.

CCATTCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1743404‑1743499
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGA  >  NC_000913/2101749‑2101843
                                                                                                                                                                                               
  ATTCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGGGA                                                                                              <  1:15874310/97‑1
   TTCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAA                                                                                             >  1:207614/1‑97
    TCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAAG                                                                                            >  1:3774946/1‑97
         CGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCG                                                                                       <  1:10856696/97‑1
             TTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATA                                                                                   <  1:6558596/97‑1
             TTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATA                                                                                   <  1:19906297/97‑1
             TTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATA                                                                                   <  1:4387830/97‑1
              TTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAA                                                                                  <  1:14471296/97‑1
                TTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGC                                                                                >  1:19502654/1‑97
                  AGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGG                                                                              >  1:14844815/1‑97
                   GTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGG                                                                             <  1:5729434/97‑1
                    TCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGG                                                                            <  1:16314441/97‑1
                       CTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAA                                                                         >  1:11417477/1‑97
                       CTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAA                                                                         <  1:17705358/97‑1
                       CTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAA                                                                         >  1:9842460/1‑97
                           TATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCT                                                                     >  1:17281959/1‑97
                             TAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTC                                                                   <  1:4974182/97‑1
                               ACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC                                                                 >  1:20596715/1‑97
                               ACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC                                                                 >  1:1903391/1‑97
                               ACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC                                                                 <  1:13108738/97‑1
                               ACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC                                                                 <  1:14087530/97‑1
                                 TACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCATCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGG                                                               <  1:19802749/97‑1
                                   CAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT                                                             <  1:4090784/97‑1
                                   CAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT                                                             <  1:12497513/97‑1
                                   CAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT                                                             >  1:11019464/1‑97
                                     AATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGA                                                           >  1:8308851/1‑97
                                       TAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACT                                                         >  1:5439205/1‑97
                                       TAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACT                                                         <  1:3047491/97‑1
                                        AAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTC                                                        >  1:15340346/1‑97
                                            GGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTC                                                    <  1:19654029/97‑1
                                            GGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTC                                                    >  1:16887418/1‑97
                                             GTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA                                                   <  1:19133128/97‑1
                                               GTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATT                                                 >  1:7022744/1‑97
                                                 TCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTC                                               <  1:3971311/97‑1
                                                 TCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTC                                               <  1:9670726/97‑1
                                                  CACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA                                              >  1:16191257/1‑97
                                                   ACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCAT                                             <  1:6179815/97‑1
                                                    CGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATT                                            >  1:20082797/1‑97
                                                    CGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATT                                            >  1:4308547/1‑97
                                                     GTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTT                                           >  1:18330326/1‑97
                                                     GTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTT                                           <  1:14386484/97‑1
                                                        CAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTT                                        >  1:7587381/1‑97
                                                        CAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTT                                        >  1:11752110/1‑97
                                                        CAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTT                                        >  1:7454374/1‑97
                                                         AGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTC                                       <  1:18517638/97‑1
                                                         AGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTC                                       <  1:1649333/97‑1
                                                         AGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATGCTTCTCGGCTGACTCAGTCATTTCATTTCTTC                                       <  1:2804071/97‑1
                                                          GAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCA                                      >  1:1284478/1‑97
                                                          GAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCA                                      >  1:16644918/1‑97
                                                             GTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGT                                   >  1:6903603/1‑97
                                                               ATATCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTT                                 <  1:21064764/97‑1
                                                                TATCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTG                                <  1:8609949/97‑1
                                                                  TCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAG                              <  1:8493970/97‑1
                                                                  TCAGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAG                              <  1:10391570/97‑1
                                                                    AGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCC                            <  1:5164715/97‑1
                                                                    AGTGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCC                            >  1:2345567/1‑97
                                                                      TGAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGA                          <  1:8955675/97‑1
                                                                       GAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGAT                         <  1:12103774/97‑1
                                                                       GAAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATACTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGAT                         <  1:17913640/97‑1
                                                                        AAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATT                        >  1:13923760/1‑97
                                                                        AAGCGCGTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATT                        >  1:15176571/1‑97
                                                                              GTCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCT                  <  1:14617267/97‑1
                                                                               TCTGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTC                 >  1:17148246/1‑97
                                                                                 TGTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCC               >  1:18686010/1‑97
                                                                                  GTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCG              <  1:8902679/97‑1
                                                                                  GTTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCG              <  1:781531/97‑1
                                                                                   TTATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGT             <  1:5292846/97‑1
                                                                                    TATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCCTTTCTTCATGCTTGAGCCGATTTTTTCTCCCGTA            >  1:15703317/1‑97
                                                                                     ATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTTAGCCGATTTTTTCTCCCGTAA           >  1:2196900/1‑97
                                                                                     ATTAGCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAA           >  1:3610435/1‑97
                                                                                         GCATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGC       <  1:10034804/97‑1
                                                                                          CATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCC      >  1:12260056/1‑97
                                                                                           ATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATTTTTTGGCCGATTTTTTCCTCCCTAAATGCCc     >  1:5843134/1‑96
                                                                                           ATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCT     <  1:3319758/97‑1
                                                                                           ATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCT     <  1:12384479/97‑1
                                                                                           ATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCT     <  1:9130705/97‑1
                                                                                           ATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCT     <  1:6320802/97‑1
                                                                                            TTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCCTTTCATTTCTTCATGTTTAAGCCGATTTTTTCTCCCGTAAATGCCTT    >  1:13335513/1‑97
                                                                                            TTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTT    >  1:7140078/1‑97
                                                                                            TTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTT    <  1:4661995/97‑1
                                                                                            TTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTT    >  1:20342347/1‑97
                                                                                            TTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTT    <  1:9333596/97‑1
                                                                                            TTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTT    <  1:15959084/97‑1
                                                                                            TTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTT    <  1:13642661/97‑1
                                                                                             TAGGGGAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTG   >  1:18070153/1‑97
                                                                                             TAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTG   >  1:10174471/1‑97
                                                                                             TAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTG   <  1:10593775/97‑1
                                                                                             TAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTG   >  1:1115052/1‑97
                                                                                             TAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTG   <  1:11268800/97‑1
                                                                                             TAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTG   >  1:3470820/1‑97
                                                                                             TAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTG   <  1:20451094/97‑1
                                                                                             TAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTG   <  1:20264173/97‑1
                                                                                              AGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCCGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGCAAATGCCTTGA  >  1:13478216/1‑97
                                                                                              AGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCTGTTAATGCCTTGA  >  1:17808283/1‑97
                                                                                              AGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGA  <  1:5951103/97‑1
                                                                                              AGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGA  >  1:2631695/1‑97
                                                                                              AGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGA  >  1:880804/1‑97
                                                                                              AGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGA  >  1:19286774/1‑97
                                                                                              AGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGA  >  1:9504751/1‑97
                                                                                              AGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGA  >  1:17436746/1‑97
                                                                                                                                                                                               
CCATTCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1743404‑1743499
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGA  >  NC_000913/2101749‑2101843

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.