BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AM406671	= 495868	56 (0.050)	1208 (1.090)	284/296	0.0	95.6%	intergenic (+68/‑41)	llmg_0504/nifZ	putative membrane protein/pyridoxal‑phosphate dependent aminotransferase
*	?	AM406671	= 549419	NA (NA)	1208 (1.090)	284/296	0.0	95.6%	intergenic (‑89/‑298)	tnp905/tdk	transposase for insertion sequence element IS905B/Tdk protein

Only 100 of 1243 total aligned reads displayed.

ATCAATATCTTGCTTTTGGGCTAGGAAGTTAAGTAGTTCTGTGGTAAACTGAGTCATAGGAATAAATCTCTTTCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGTTTATTCAGAAAGAATATAAGATGAAAAATAGATGC‑C‑TTTTTTGAAGTAAGGATAAAATCTCTTAAGATTCGGTAGAATCAG  >  AM406671/549274‑549566

 tcaATATCTTGCTTTTGGGCTAGGAAGTTAAGTAGTTCTGTGGTAAACTGAGTCATAGGAATAAATCTCTTTCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGa                                                                                                                                                   <  1:1163749/149‑1 (MQ=31)

    atatCTTGCTTTTGGGCTAGGAAGTTAAGTAGTTCTGTGGTAAACTGAGTCATAGGAATAAATCTCTTTCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGaaaa                                                                                                                                                >  2:2994810/1‑149 (MQ=32)

     tatCTTGCTTTTGGGCTAGGAAGTTAAGTAGTTCTGTGGTAAACTGAGTCATAGGAATAAATCTCTTTCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAg                                                                                                                                               <  2:7070031/149‑1 (MQ=32)

     tatCTTGCTTTTGGGCTAGGAAGTTAAGTAGTTCTGTGGTAAACTGAGTCATAGGAATAAATCTCTTTCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAg                                                                                                                                               <  1:5710067/149‑1 (MQ=32)

      atCTTGCTTTTGGGCTAGGAAGTTAAGTAGTTCTGTGGTAAACTGAGTCATAGGAATAAATCTCTTTCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAga                                                                                                                                              <  1:1698647/149‑1 (MQ=32)

      atCTTGCTTTTGGGCTAGGAAGTTAAGTAGTTCTGTGGTAAACTGAGTCATAGGAATAAATCTCTTTCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAga                                                                                                                                              >  1:8298639/1‑149 (MQ=32)

        cTTGCTTTTGGGCTAGGAAGTTAAGTAGTTCTGTGGTAAACTGAGTCATAGGAATAAATCTCTTTCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAgatg                                                                                                                                            >  1:2680187/1‑149 (MQ=33)

          tGCTTTTGTGCTAGGAAGTTAAGTAGTTCTGTGGTAAACTGAGTCATAGGAATAAATCTCTTTCTAGTAATGTGTCGCAACTCAACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAgatgag                                                                                                                                          >  2:642089/1‑148 (MQ=255)

           gCTTTTGGGCTAGGAAGTTAAGTAGTTCTGTGGTAAACTGAGTCATAGGAATAAATCTCTTTCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGatgatg                                                                                                                                         >  1:1788141/1‑149 (MQ=35)

            cTTTTGGGCTAGGAAGTTAAGTAGTTCTGTGGTAAACTGAGTCATAGGAATAAATCTCTTTCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGAtgatga                                                                                                                                        <  2:3486782/149‑1 (MQ=38)

              tttGGGCTAGGAAGTTAAGTAGTTCTGTGGTAAACTGAGTCATAGGAATAAATCTCTTTCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGaaa                                                                                                                                      >  2:1842467/1‑149 (MQ=39)

              tttGGGCTAGGAAGTTAAGTAGTTCTGTGGTAAACTGAGTCATAGGAATAAATCTCTTTCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGaaa                                                                                                                                      <  1:6036518/149‑1 (MQ=39)

                 gggCTAGGAAGTTAAGTAGTTCTGTGGTAAACTGAGTCATAGGAATAAATCTCTTTCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAaatt                                                                                                                                   <  2:404244/149‑1 (MQ=255)

                   gCTAGGAAGTTAAGTAGTTCTGTGGTAAACTGAGTCATAGGAATAAATCTCTTTCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAATGATGATGAAaattga                                                                                                                                 >  2:4723532/1‑149 (MQ=255)

                     tAGGAAGTTAAGTAGTTCTGTGGTAAACTGAGTCATAGGAATAAATCTCTTTCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAaattgaat                                                                                                                               <  1:74619/149‑1 (MQ=255)

                        gAAGTTAAGTAGTTCTGTGGTAAACTGAGTCATAGGAATAAATCTCTTTCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAattgaattga                                                                                                                            <  1:4984890/149‑1 (MQ=255)

                          aGTTAAGTAGTTCTGTGGTAAACTGAGTCATAGGAATAAATCTCTTTCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGt                                                                                                                          >  2:4178519/1‑149 (MQ=255)

                          aGTTAAGTAGTTCTGTGGTAAACTGAGTCATAGGAATAAATCTCTTTCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGt                                                                                                                          >  2:2011843/1‑149 (MQ=255)

                           gTTAAGTAGTTCTGTGGTAAACTGAGTCATAGGAATAAATCTCTTTCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATCATGAAAATTGAATTGAGTa                                                                                                                         >  1:4681627/1‑149 (MQ=255)

                            ttAAGTAGTTCTGTGGTAAACTGAGTCATAGGAATAAATCTCTTTCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTaa                                                                                                                        >  2:1073444/1‑149 (MQ=255)

                             tAAGTAGTTCTGTGGTAAACTGAGTCATAGGAATAAATCTCTTTCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAag                                                                                                                       <  2:8464987/149‑1 (MQ=255)

                               agtagtTCTGTGGTAAACTGAGTCATAGGAATAAATCTCTTTCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAagag                                                                                                                     <  1:4807592/149‑1 (MQ=255)

                               agtagtTCTGTGGTAAACTGAGTCATAGGAATAAATCTCTTTCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAagag                                                                                                                     <  1:1454240/149‑1 (MQ=255)

                                gtagtTCTGTGGTAAACTGAGTCATAGGAATAAATCTCTTTCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAgg                                                                                                                    >  1:7394676/1‑149 (MQ=255)

                                    ttCTGTGGTAAACTGAGTCATAGGAATAAATCTCTTTCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAg                                                                                                                >  2:1707105/1‑149 (MQ=255)

                                      cTGTGGTAAACTGAGTCATAGGAATAAATCTCTTTCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCt                                                                                                              >  1:7186892/1‑149 (MQ=255)

                                       tgtgGTAAACTGAGTCATAGGAATAAATNTCTTTCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCtt                                                                                                             >  1:5337569/1‑149 (MQ=255)

                                        gtgGTAAACTGAGTCATAGGAATAAATCTCTTTCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTg                                                                                                            <  1:24950/149‑1 (MQ=255)

                                           gTAAACTGAGTCATAGGAATAAATCTCTTTCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAg                                                                                                         >  2:6283842/1‑149 (MQ=255)

                                                cTGAGTCATAGGAATAAATCTCTTTCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGttttt                                                                                                    <  1:3841978/149‑1 (MQ=255)

                                                 tGAGTCATAGGAATAAATCTCTTTCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTa                                                                                                   >  2:87692/1‑149 (MQ=255)

                                                  gAGTCATAGGAATAAATCTCTTTCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAg                                                                                                  <  1:6283842/149‑1 (MQ=255)

                                                   aGTCATAGGAATAAATCTCTTTCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGa                                                                                                 <  1:192525/149‑1 (MQ=255)

                                                     tCATAGGAATAAATCTCTTTCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGAtt                                                                                               <  1:4355145/149‑1 (MQ=255)

                                                        tAGGAATAAATCTCTTTCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCAt                                                                                            <  1:3245581/149‑1 (MQ=255)

                                                        tAGGAATAAATCTCTTTCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCAt                                                                                            <  2:3648691/149‑1 (MQ=255)

                                                         aGGAATAAATCTCTTTCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTACGAGGAAAGCTTGTAGTTTTTAGATTCATa                                                                                           >  2:7367748/1‑149 (MQ=255)

                                                         aGGAATAAATCTCTTTCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATa                                                                                           >  2:4321699/1‑149 (MQ=255)

                                                         aGGAATAAATCTCTTTCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATa                                                                                           >  1:1345328/1‑149 (MQ=255)

                                                         aGGAATAAATCTCTTTCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATa                                                                                           >  1:8172663/1‑149 (MQ=255)

                                                          ggAATAAATCTCTTTCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATTATGAAAATTGAATTGAGTAAGAGGGAAGCTTGTAGTTTTTAGATTCATaa                                                                                          >  2:1557591/1‑149 (MQ=255)

                                                             aTAAATCTCTTTCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTa                                                                                       >  1:4210290/1‑149 (MQ=255)

                                                               aaaTCTCTTTCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTTTTTTTACACAACTTATTTTACACTAACAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTatt                                                                                     >  2:6929570/1‑147 (MQ=255)

                                                               aaaTCTCTTTCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGt                                                                                     <  1:3988500/149‑1 (MQ=255)

                                                               aaaTCTCTTTCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGt                                                                                     >  1:2224323/1‑149 (MQ=255)

                                                                 aTCTCTTTCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTTTTTTTTTTCAACTTATTTTACACTACAAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGttt                                                                                   >  2:831084/1‑149 (MQ=25)

                                                                  tctcTTTCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGTTTa                                                                                  >  2:3244256/1‑149 (MQ=255)

                                                                    tctTTCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGTTTAtt                                                                                <  2:9078118/149‑1 (MQ=255)

                                                                    tctTTCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGTTTAtt                                                                                <  2:4914215/149‑1 (MQ=255)

                                                                     ctTTCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGTTTATTc                                                                               >  1:6732943/1‑149 (MQ=255)

                                                                       ttCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGTTTATTCag                                                                             <  2:8620774/149‑1 (MQ=255)

                                                                         cTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGTTTATTCagaa                                                                           >  2:6795646/1‑149 (MQ=255)

                                                                          tAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGTTTATTCagaaa                                                                          <  1:8714756/149‑1 (MQ=255)

                                                                          tAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGTTTATTCagaaa                                                                          >  2:3386851/1‑149 (MQ=255)

                                                                           aggaaTGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTCTTTTACACTACCAAGAGAAGATGATGAAAATTGAATTGAGTAAGAGAAAAGCTTGTAGTTTTTAGACTCATAACTAGTTTATTCagaaag                                                                         <  2:3902863/146‑1 (MQ=25)

                                                                             tAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGTTTATTCagaaagaa                                                                       >  1:2146216/1‑149 (MQ=255)

                                                                             tAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGTTTATTCagaaagaa                                                                       <  1:2011843/149‑1 (MQ=255)

                                                                             tAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGTTTATTCagaaagaa                                                                       <  2:8909593/149‑1 (MQ=255)

                                                                              aaTGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCGAGAAAAGATGATGAAAACTGAATTGAGTAACAGGAAAGCTTGTAGTCTTTAGATTCATAACTAGTTTATTCAGAAAGAat                                                                      <  2:8148685/149‑1 (MQ=255)

                                                                              aaTGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGTTTATTCAGAAAGAat                                                                      <  2:928598/149‑1 (MQ=255)

                                                                               aTGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGTTTATTCAGAAAGAata                                                                     <  2:6660723/149‑1 (MQ=255)

                                                                               aTGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGTTTATTCAGAAAGAata                                                                     <  1:9399459/149‑1 (MQ=255)

                                                                               aTGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGTTTATTCAGAAAGAata                                                                     <  2:7556679/149‑1 (MQ=255)

                                                                                tGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTATTTTATTCAGAAAGAatat                                                                    >  2:7782027/1‑149 (MQ=255)

                                                                                 gTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGTTTATTCAGAAAGAAtata                                                                   >  2:6135163/1‑149 (MQ=255)

                                                                                             tactaTAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGCAAGCTTGTAGTTTTTAGATTCATAACTAGTTTATTCAGAAAGAATATAAGATGAAAAATa                                                       <  1:5643605/149‑1 (MQ=255)

                                                                                             tactaTAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGTTTATTCAGAAAGAATATAAGATGAAAAATa                                                       >  1:8620139/1‑149 (MQ=255)

                                                                                             tactaTAACGGATTTATTCCTTTTTGTGTTTACACAACGTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAACAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGTTTATTCAGAAAGAATATAAGATGAAAAATa                                                       <  1:5900465/149‑1 (MQ=255)

                                                                                                 ataACGGATTTATTCCTTTTTGTGTTTACAAAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGTTTATTCAGAAAGAATATAAGATGAAAAATAGATg                                                   <  1:4510733/149‑1 (MQ=255)

                                                                                                  taACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGTTTATTCAGAAAGAATATAAGATGAAAAATAGATGc                                                  >  2:2228142/1‑149 (MQ=255)

                                                                                                  taACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGTTTATTAAGAAAGAATATAAGATGAAAAATAGATGc                                                  >  2:5718611/1‑149 (MQ=255)

                                                                                                  taACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGCAGTTTTTAGATTCATAACTAGTTTATTCAGAAAGAATATAAGATAAAAAAAAGATGc                                                  >  1:100616/1‑149 (MQ=255)

                                                                                                   aaCGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGTTTATTCAGAAGGAATATAAGATGAAAAATAGATGc‑c                                                <  2:5289601/149‑1 (MQ=255)

                                                                                                          ttATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGTTTATTCAGAAAGAATATAAGATGAAAAATAGATGC‑C‑ttttttt                                        >  1:5194374/1‑148 (MQ=255)

                                                                                                          ttATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAAGTGAAGTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGTTTATTCAGAAAGAATATAAGATGAAAAATAGGTGC‑C‑ttttttt                                        >  1:344467/1‑148 (MQ=255)

                                                                                                           tATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAGTTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGTTTATTCAGAAAGAATATAAGATGAAAAATAGATGC‑C‑tttttttg                                       >  1:8497188/1‑147 (MQ=255)

                                                                                                           tATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAAATAAGTAAGAGGAAAACTGGTAGTTTTTAGATTAATAACAAGTTTATTCAGAAAGAATATAAGATGAAAAATAGATAC‑C‑tttttttt                                       >  1:5485580/1‑147 (MQ=38)

                                                                                                             ttCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGTTTATTCAGAAAGAATATAAGATGAAAAATAGATGC‑C‑ttttttttat                                     >  2:5115194/1‑145 (MQ=255)

                                                                                                              tCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGTTTATTCAGAAAGAATATAAGATGAAAAATAGATGC‑C‑tttttttgaag                                    >  2:9461763/1‑144 (MQ=255)

                                                                                                                  ttttttGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGTTTATTCATAAAGAATATAAGATGAAAAATAGATGC‑CTTTTTTTGAAGTAAg                                 >  2:2459327/1‑149 (MQ=255)

                                                                                                                  ttttGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGTTTATTCAGAAAGAATATAAGATGAAAAATAGATGC‑CTTTTTTTGAAGTAAg                                 >  1:3716415/1‑149 (MQ=255)

                                                                                                                   tttGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGTTTATTCAGAAAGAATATAAGATGAAAAATAGATGC‑CTTTTTTTGAAGTAAgg                                >  1:7030152/1‑149 (MQ=255)

                                                                                                                   tttGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGTTTATTCAGAAAGAATATAAGATGAAAAATAGATGC‑CTTTTTTTGAAGTAAgg                                <  1:2942515/149‑1 (MQ=255)

                                                                                                                    ttGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGTTTATTCAGAAAGAATATAAGATGAAAAATAGATGC‑CTTTTTTTGAAGTAAGGa                               >  1:7657266/1‑149 (MQ=255)

                                                                                                                     tgtgTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGTTTATTCAGAAAGAATATAAGATGAAAAATAGATGC‑CTTTTTTTGAAGTAAGGAt                              >  1:8998894/1‑149 (MQ=255)

                                                                                                                      gtgtTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGTTTATTCAGAAAGAATATAAGATGAAAAATAGATGC‑CTTTTTTTGAAGTAAGGATa                             <  2:552517/149‑1 (MQ=255)

                                                                                                                      gtgtTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGTTTATTCAGAAAGAATATAAGATGAAAAATAGATGC‑CTTTTTTTGAAGTAAGGATa                             >  2:2127403/1‑149 (MQ=255)

                                                                                                                      gtgtTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGTTTATTCAGAAAGAATATAAGATGAAAAATAGATGC‑CTTTTTTTGAAGTAAGGATa                             <  2:7954349/149‑1 (MQ=255)

                                                                                                                       tgtTTACACAACTTATATTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGTTTATTCAGAAAGAATATAAGATGAAAAATAGATGC‑CTTTTTTTGAAGTAAGGATaa                            <  1:6449025/149‑1 (MQ=255)

                                                                                                                          ttACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGCATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGTTTATTCAGAAAGAATATAAGATGAAAAATAGATGC‑CTTTTTTTGAAGTAAGGATAAAAt                         >  1:9142866/1‑149 (MQ=255)

                                                                                                                             cacaACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGTTTATTCAGAAAGAATATAAGATGAAAAATAGATGCAT‑TTTTTTGAAGTAAGGATAAAAtctt                      >  2:5855458/1‑148 (MQ=255)

                                                                                                                              acaACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGTTTATTCAGAAAGAATATAAGATGAAAAATAGATGC‑CTTTTTTTGAAGTAAGGATAAAATctct                     <  1:2784887/149‑1 (MQ=255)

                                                                                                                                aaCTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGTTTATTCAGAAAGAATATAAGATGAAAAATAGATGC‑CTTTTTTTGAAGTAAGGATAAAATCTCTTa                   <  2:7255827/149‑1 (MQ=255)

                                                                                                                                 aCTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGTTTATTCAGAAAGAATATAAGATGAAAAATAGATGC‑CTTTTTTTGAAGTAAGGATAAAATCTCTTaa                  >  1:7870297/1‑149 (MQ=255)

                                                                                                                                 aCTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGTTTATTCAGAAAGAATATAAGATGAAAAATAGATGC‑CTTTTTTTGAAGTAAGGATAAAATCTCTTaa                  >  2:5970549/1‑149 (MQ=255)

                                                                                                                                    tATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGTTTATTCAGAAAGAATATAAGATGAAAAATAGATGC‑CTTTTTTTGAAGTAAGGATAAAATCTCTTAAGAt               <  2:1423801/149‑1 (MQ=255)

                                                                                                                                         tACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGTTTATTCAGAAAGAATATAAGATGAAAAATAGATGC‑CTTTTTTTGAAGTAAGGATAAAATCTCTTAAGATTAGGt          >  2:451273/1‑149 (MQ=255)

                                                                                                                                            acTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGTTTATTCAGAAAGAATATAAGATGAAAAATAGATGC‑CTTTTTTTGAAGTAAGGATAAAATCTCTTAAGATTCGGTAGa       <  2:1314390/149‑1 (MQ=255)

                                                                                                                                             cTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGTTTATTCAGAAAGAATATAAGATGAAAAATAGATGC‑CTTTTTTTGAAGTAAGGATAAAATCTCTTAAGATTCGGTAGaa      <  2:2718487/149‑1 (MQ=255)

                                                                                                                                                 cAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGTTTATTCAGAAAGAATATAAGATGAAAAATAGATGC‑CTTTTTTTGAAGTAAGGATAAAATCTCTTAAGATTCGGTAGAATCAg  >  1:3354476/1‑149 (MQ=255)

ATCAATATCTTGCTTTTGGGCTAGGAAGTTAAGTAGTTCTGTGGTAAACTGAGTCATAGGAATAAATCTCTTTCTAGTAATGTTTCGCAACTCTACTATAACGGATTTATTCCTTTTTGTGTTTACACAACTTATTTTACACTACCAAGAAAAGATGATGAAAATTGAATTGAGTAAGAGGAAAGCTTGTAGTTTTTAGATTCATAACTAGTTTATTCAGAAAGAATATAAGATGAAAAATAGATGC‑C‑TTTTTTGAAGTAAGGATAAAATCTCTTAAGATTCGGTAGAATCAG  >  AM406671/549274‑549566

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.