New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AM406671 704944 =NA (NA)1261 (0.960) 218/296 2.2 NA coding (127/261 nt) llmg_0720 conserved hypothetical protein
?AM406671 = 796737 NA (NA)intergenic (+88/‑293) llmg_0823/ps333 putative transposase helper protein for IS712D/terminase small subunit

Only 100 of 1303 total aligned reads displayed.

AAATCTTATAGAATGAAAGACTATAGTGAGAAGAAAACCAAAACCCCAAAAAGTAAATAAAGTGATGGGCCCAAAACCAACAATTTGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTATGTCCAACATTATTTGGGGCTGATAATACTAGTACAGTTGCCGAATAATATTAATAAGTCAGTGCGG  >  AM406671/796590‑796885
                                                                                                                                                   |                                                                                                                                                    
 aaTCTGATAGAATGAAAGAGTATAGTGAGAAGAAAACCAAAACCCCAAAAAGTAAATAAAGTGAGGGGCCCAAAACCAACAATTTGGGTGGCCCATTTCCTACATTTTCGATGACCCAAAACCAACATTTTTAGATGGCCCTTGACaaa                                                                                                                                                    <  2:6888171/149‑1 (MQ=9)
   tCTTATAGAATGAAAGACTATAGTGAGAAGAAAACCAAAACCCCAAAAAGTAAATAAAGTGATGGGCCCAAAACCAACAATTTGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTATATGGCCCTTGACAAAAg                                                                                                                                                  <  2:5869907/149‑1 (MQ=17)
    cTTATAGAATGAAAGACTATAGTGAGAAGAAAACCAAAACCCCAAAAAGTAAATAAAGTGATGGGCCCAAAACCAACAATTTGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAgg                                                                                                                                                 <  2:5026119/149‑1 (MQ=33)
     ttATAGAATGAAAGACTATAGTGAGAAGAAAACCAAAACCCCAAAAAGTAAATAAAGTGATGGGCCCAAAACCAACAATTTGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGc                                                                                                                                                >  2:8497925/1‑149 (MQ=34)
       ataGAATGAAAGACTATAGTGAGAAGAAAACCAAAACCCCAAAAAGTAAATAAAGTGATGGGCCCAAAACCAACAATTTGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCaa                                                                                                                                              >  2:4806519/1‑149 (MQ=35)
       ataGAATGAAAGACTATAGTGAGAAGAAAACCAAAACCCCAAAAAGTAAATAAAGTGATGGGCCCAAAACCAACAATTTGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCaa                                                                                                                                              >  1:2501353/1‑149 (MQ=35)
       ataGAATGAAAGACTATAGTGAGAAGAAAACCAAAACCCCAAAAAGTAAATAAAGTGATGGGCCCAAAACCAACAATTTGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCaa                                                                                                                                              <  2:251088/149‑1 (MQ=35)
           aaTGAAAGACTATAGTGAGAAGAAAACCAAAACCCCAAAAAGTAAATAAAGTGATGGGCCCAAAACCAACAATTTGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGc                                                                                                                                          >  1:863557/1‑149 (MQ=39)
               aaaGACTATAGTGAGAAGAAAACCAAAACCCCAAAAAGTAAATAAAGTGATGGGCCCAAAACCAACAATTTGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACaa                                                                                                                                      <  1:8086734/149‑1 (MQ=255)
                aaGACTATAGTGAGAAGAAAACCAAAACCCCAAAAAGTAAATAAAGTGATGGGCCCAAAACCAACAATTTGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACaaa                                                                                                                                     <  2:5197171/149‑1 (MQ=255)
                aaGACTATAGTGAGAAGAAAACCAAAACCCCAAAAAGTAAATAAAGTGATGGGCCCAAAACCAACAATTTGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACaaa                                                                                                                                     <  1:887827/149‑1 (MQ=255)
                  gACTATAGTGAGAAGAAAACCAAAACCCCAAAAAGTAAATAAAGTGATGGGCCCAAAACCAACAATTTGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAat                                                                                                                                   >  2:7843517/1‑149 (MQ=255)
                   aCTATAGTGAGAAGAAAACCAAAACCCCAAAAAGTAAATAAAGTGATGGGCCCAAAACCAACAATTTGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAata                                                                                                                                  <  2:1904212/149‑1 (MQ=255)
                   aCTATAGTGAGAAGAAAACCAAAACCCCAAAAAGTAAATAAAGTGATGGGCCCAAAACCAACAATTTGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAata                                                                                                                                  >  2:2859431/1‑149 (MQ=255)
                       taGTGAGAAGAAAACCAAAACCCCAAAAAGTAAATAAAGTGATGGGCCCAAAACCAACAATTTGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCAt                                                                                                                              <  1:2672428/149‑1 (MQ=255)
                        aGTGAGAAGAAAACCAAAACCCCAAAAAGTAAATAAAGTGATGGGCCCAAAACCAACAATTTGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATa                                                                                                                             >  2:10939793/1‑149 (MQ=255)
                         gTGAGAAGAAAACCAAAACCCCAAAAAGTAAATAAAGTGATGGGCCCAAAACCAACAATTTGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATaa                                                                                                                            <  1:4905233/149‑1 (MQ=255)
                           gagaAGAAAACCAAAACCCCAAAAAGTAAATAAAGTGATGGGCCCAAAACCAACAATTTGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGt                                                                                                                          <  1:1200958/149‑1 (MQ=255)
                           gagaAGAAAACCAAAACCCCAAAAAGTAAATAAAGTGATGGGCCCAAAACCAACAATTTGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGt                                                                                                                          <  1:9463097/149‑1 (MQ=255)
                            agaagaAACCCAAAACCCCAAAAAGTCAATAAAGTGATGGGCCCAAAACCAACAATTTGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACANAAGGCAAAAGCACAAAATATCATAAGTa                                                                                                                         <  1:6387544/149‑1 (MQ=255)
                            agaagaAAACCAAAACCCCAAAAAGTAAATAAAGTGATGGGCCCAAAACCAACAATTTGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTa                                                                                                                         <  2:1653305/149‑1 (MQ=255)
                               agaaAACCAAAACCCCAAAAAGTAAATAAAGTGATGGGCCCAAAACCAACAATTTGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCg                                                                                                                      >  2:10331142/1‑149 (MQ=255)
                               agaaAACCAAAACCCCAAAAAGTAAATAAAGTGATGGGCCAAAAACCAACAACCTGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATCTTTAGATAGCACTTGCCAAAAGTCAAAAGCACAAAATGTTATAAGTATca                                                                                                                      >  2:10566545/1‑148 (MQ=14)
                                gaaAACCAAAACCCCAAAAAGTAAATAAAGTGATGGGCCCAAAACCAACAATTTGGGTGGCCCATTTCCTACATTTGCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCgg                                                                                                                     <  2:1234349/149‑1 (MQ=255)
                                 aaaaccaaaaccCCAAAAAGTAAATAAAGTGATGGGCCCAAAACCAACAATTTGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGt                                                                                                                    <  1:7949960/149‑1 (MQ=255)
                                  aaaccaaaaccCCAAAAAGTAAATAAAGTGATGGGCCCAAAACCAACAATTTGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGtt                                                                                                                   >  2:4250762/1‑149 (MQ=255)
                                   aaccaaaacaCCAAAAAGTAAATAAAGTGATGGGCCCAAAACCAACAATTTGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCAAAAAAAAAAAGAAAAAGCACAAAATATCATAAGTATCGGttt                                                                                                                  <  2:5676110/149‑1 (MQ=14)
                                     ccaaaaccCCAAAAAGTAAATAAAGTGATGGGCCCAAAACCAACAATTTGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGa                                                                                                                <  2:7228801/149‑1 (MQ=255)
                                     ccaaaaccCCAAAAAGTAAATAAAGTGATGGGCCCAAAACCAACAATTTGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGa                                                                                                                <  1:11121445/149‑1 (MQ=255)
                                      caaaaccCCAAAAAGTAAATAAAGTGATGGGCCCAAAACCAACAATTTGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGaa                                                                                                               >  1:7023502/1‑149 (MQ=255)
                                       aaaaccCCAAAAAGTAAATAAAGTGATGGGCCCAAAACCAACAATTTGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAAt                                                                                                              <  1:10570011/149‑1 (MQ=255)
                                       aaaaccCCAAAAAGTAAATAAAGTGATGGGCCCAAAACCAACAATTTGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAAt                                                                                                              >  2:7448034/1‑149 (MQ=255)
                                            cccAAAAAGTAAATAAAGTGATGGGCCCAAAACCAACAATTTGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCtt                                                                                                         >  1:4622908/1‑149 (MQ=255)
                                               aaaaaGTAAATAAAGTGATGGGCCCAAAACCAACAATTTGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCAt                                                                                                      >  2:8138767/1‑149 (MQ=255)
                                                 aaaGTAAATAAAGTGATGGGCCCAAAACCAACAATTTGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATaa                                                                                                    >  1:1394979/1‑149 (MQ=255)
                                                 aaaGTAAATAAAGTGATGGGCCCAAAACCAACAATTTGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATaa                                                                                                    >  2:4490777/1‑149 (MQ=255)
                                                   aGTAAATAAAGTGATGGGCCCAAAACCAACAATTTGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGc                                                                                                  >  2:9601301/1‑149 (MQ=255)
                                                      aaataaaGTGATGGGCCCAAAACCAACAATTTGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTg                                                                                               >  1:162147/1‑149 (MQ=255)
                                                       aataaaGTGATGGGCCCAAAACCAACAATTTGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGt                                                                                              >  1:3352932/1‑149 (MQ=255)
                                                       aataaaGTGATGGGCCCAAAACCAACAATTTGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGt                                                                                              >  2:1013549/1‑149 (MQ=255)
                                                           aaGTGATGGGCCCAAAACCAACAATTTGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTCGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAgg                                                                                          >  1:7209824/1‑149 (MQ=255)
                                                              tGATGGGCCCAAAACCAACAATTTGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGtt                                                                                       <  1:5340759/149‑1 (MQ=255)
                                                               gATGGGCCCAAAACCAACAATTTGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTc                                                                                      >  1:10758325/1‑149 (MQ=255)
                                                                   ggCCCAAAACCAACAATTTGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACAGTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACt                                                                                  <  1:322485/149‑1 (MQ=255)
                                                                        aaaaCCAACAATTTGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTg                                                                             <  1:4281405/149‑1 (MQ=255)
                                                                           aCCAACAATTTGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACt                                                                          >  1:10933758/1‑149 (MQ=255)
                                                                            ccAACAATTTGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACtt                                                                         <  1:5134443/149‑1 (MQ=255)
                                                                              aacaaTTTGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGc                                                                       <  1:7543423/149‑1 (MQ=255)
                                                                               acaaTTTGGGTGGCCCATTTCCTACATTTTCAATGATCCAAAACGAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAGATATCATAAGTATCGGTTTGAGTTGCATCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCt                                                                      <  2:7677786/149‑1 (MQ=37)
                                                                                caaTTTGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTa                                                                     >  2:8681476/1‑149 (MQ=255)
                                                                                caaTTTGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTa                                                                     >  2:9077236/1‑149 (MQ=255)
                                                                                 aagtggggTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTGTCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTAt                                                                    <  1:9896535/144‑1 (MQ=255)
                                                                                  aTTTGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTATg                                                                   <  2:1413404/149‑1 (MQ=255)
                                                                                    ttGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTATGTc                                                                 <  2:6292433/149‑1 (MQ=255)
                                                                                    ttGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTATGTc                                                                 <  1:3512201/149‑1 (MQ=255)
                                                                                     tGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTATGTcc                                                                <  2:3617815/149‑1 (MQ=255)
                                                                                      gggTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTATGTCCa                                                               <  2:927208/149‑1 (MQ=255)
                                                                                            cccATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTATGTCCAACatta                                                         <  2:7169770/149‑1 (MQ=255)
                                                                                               aTTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATACGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTATGTCCAACATTCttt                                                      >  2:11101943/1‑149 (MQ=255)
                                                                                                tttCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTATGTCCAACATTATTTg                                                     >  2:11267466/1‑149 (MQ=255)
                                                                                                tttCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTATGTCCAACATTATTTg                                                     >  1:9112634/1‑149 (MQ=255)
                                                                                                tttCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTATGTCCAACATTATTTg                                                     >  1:7395107/1‑149 (MQ=255)
                                                                                                 ttCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTATGTCCAACATTATTTgg                                                    <  2:2214273/149‑1 (MQ=255)
                                                                                                    cTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTATGTCCAACATTATTTGGGGc                                                 >  1:10020757/1‑149 (MQ=255)
                                                                                                         ttttCAATGACCCAAAACCAACATTTTTTTTTTTTTTTTGACAAAAGGCAAAAGCACAAAATATCATATGTATCGGTTTGAATTGCTTCATAAGCTTTTTAGGGTTCGACTCCCTGACTTGCTATCTCCAACATTATTTGTTGCTGata                                            >  2:10751008/1‑149 (MQ=255)
                                                                                                          tttCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTATGTCCAACATTATTTGGGGCTGataa                                           <  2:3840813/149‑1 (MQ=255)
                                                                                                            tCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTATGTCCAACATTATTTGGGGCTGataata                                         <  2:8895156/149‑1 (MQ=255)
                                                                                                               aTGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTATGTCCAACATTATTTGGGGCTGATAATACTa                                      <  1:2216020/149‑1 (MQ=255)
                                                                                                               aTGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTATGTCCAACATTATTTGGGGCTGATAATACTa                                      <  1:6112832/149‑1 (MQ=255)
                                                                                                                tGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTATGTCCAACATTATTTGGGGCTGATAATACTAg                                     >  1:3695916/1‑149 (MQ=255)
                                                                                                                 gACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTATGTCCAACATTATTTGGGGCTGATAATACTAGt                                    <  1:1920636/149‑1 (MQ=255)
                                                                                                                   cccAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTATGTCCAACATTATTTGGGGCTGATAATACTAGTAc                                  <  1:235014/149‑1 (MQ=255)
                                                                                                                   cccAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTATGTCCAACATTATTTGGGGCTGATAATACTAGTAc                                  <  1:3012716/149‑1 (MQ=255)
                                                                                                                    ccAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTATGTCCAACATTATTTGGGGCTGATAATACTAGTACa                                 >  2:4117711/1‑149 (MQ=255)
                                                                                                                     cAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTATGTCCAACATTATTTGGGGCTGATAATACTAGTACAg                                <  1:2872262/149‑1 (MQ=255)
                                                                                                                     cAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTATGTCCAACATTATTTGGGGCTGATAATACTAGTACAg                                <  1:4412543/149‑1 (MQ=255)
                                                                                                                      aaaaCCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTATGTCCAACATTATTTGGGGCTGATAATACTAGTACAGt                               >  2:8382086/1‑149 (MQ=255)
                                                                                                                       aaaCCAACATTTTTAGATGGCACTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTGCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTATGTCCAACATTATTTGGGGCTGATAATACTAGTACAGtt                              >  1:2092264/1‑149 (MQ=255)
                                                                                                                        aaCCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTATGTCCAACATTATTTGGGGCTGATAATACTAGTACAGTTg                             <  2:6720100/149‑1 (MQ=255)
                                                                                                                        aaCCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGAATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTATGTCCAACATTATTTGGGGCTGATAATACTAGTACAGTTg                             >  1:3849885/1‑149 (MQ=255)
                                                                                                                         aCCAACATTTTTAGATGGCCCTTGACAAAATGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTATGTCCAACATTATTTGGGGCTGATAATACTAGTACAGTTGc                            <  2:4690161/149‑1 (MQ=255)
                                                                                                                         aCCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTATGTCCAACATTATTTGGGGCTGATAATACTAGTACAGTTGc                            >  1:8408820/1‑149 (MQ=255)
                                                                                                                             aCATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTATGTCCAACATTATTTGGGGCTGATAATACTAGTACAGTTGCCGaa                        <  2:6534728/149‑1 (MQ=255)
                                                                                                                               aTTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTATGTCCAACATTATTTGGGGCTGATAATACTAGTACAGTTGCCGaata                      <  2:330237/149‑1 (MQ=255)
                                                                                                                                tgtttAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTATGTCCAACATTATTTGGGGCTGATAATACTAGTACAGTTGCCGaataa                     <  2:5965860/147‑1 (MQ=255)
                                                                                                                                   ttAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTATGTCCAACATTATTTGGGGCTGATAATACTAGTACAGTTGCCGAATAatat                  >  2:2013173/1‑149 (MQ=255)
                                                                                                                                     aGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTATGTCCAACATTATTTGGGGCTGATAATACTAGTACAGTTGCCGAATAATATta                <  2:3100719/149‑1 (MQ=255)
                                                                                                                                     aGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTATGTCCAACATTATTTGGGGCTGATAATACTAGTACAGTTGCCGAATAATATta                <  1:1740074/149‑1 (MQ=255)
                                                                                                                                      gATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTATGTCCAACATTATTTGGGGCTGATAATACTAGTACAGTTGCCGAATAATATtaa               >  1:1028245/1‑149 (MQ=255)
                                                                                                                                       aTGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTATGTCCAACATTATTTGGGGCTGATAATACTAGTACAGTTGCCGAATAATATtaat              <  1:1500734/149‑1 (MQ=255)
                                                                                                                                         ggCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTATGTCCAACATTATTTGGGGCTGATAATACTAGTACAGTTGCCGAATAATATtaataa            <  1:4073846/149‑1 (MQ=255)
                                                                                                                                          gCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTATGTCCAACATTATTTGGGGCTGATAATACTAGTACAGTTGCCGAATAATATTAATAAg           <  1:6760005/149‑1 (MQ=255)
                                                                                                                                           cccTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTATGTCCAACATTATTTGGGGCTGATAATACTAGTACAGTTGCCGAATAATATTAATAAGt          <  2:9845532/149‑1 (MQ=255)
                                                                                                                                           cccTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTATGTCCAACATTATTTGGGGCTGATAATACTAGTACAGTTGCCGAATAATATTAATAAGt          <  1:7746900/149‑1 (MQ=255)
                                                                                                                                              ttGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTATGTCCAACATTATTTGGGGCTGATAATACTAGTACAGTTGCCGAATAATATTAATAAGTCAg       <  1:9246450/149‑1 (MQ=255)
                                                                                                                                              ttGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTATGTCCAACATTATTTGGGGCTGATAATACTAGTACAGTTGCCGAATAATATTAATAAGTCAg       <  1:6554841/149‑1 (MQ=255)
                                                                                                                                                gACAAAAGGCAAAAGCACATAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTATGTCCAACATTATTTGGGGCTGATAATACTAGTACAGTTGCCGAATAATATTAATAAGTCAGTg     <  1:5604984/149‑1 (MQ=255)
                                                                                                                                                 aCAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTATGTCCAACATTATTTGGGGCTGATAATACTAGTACAGTTGCCGAATAATATTAATAAGTCAGTGc    <  1:9731965/149‑1 (MQ=255)
                                                                                                                                                 aCAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTATGTCCAACATTATTTGGGGCTGATAATACTAGTACAGTTGCCGAATAATATTAATAAGTCAGTGc    >  1:5814694/1‑149 (MQ=255)
                                                                                                                                                   aaaaGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTATGTCCAACATTATTTGGGGCTGATAATACTAGTACAGTTGCCGAATAATATTAATAAGTCAGTGCgg  <  2:5423556/149‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
AAATCTTATAGAATGAAAGACTATAGTGAGAAGAAAACCAAAACCCCAAAAAGTAAATAAAGTGATGGGCCCAAAACCAACAATTTGGGTGGCCCATTTCCTACATTTTCAATGACCCAAAACCAACATTTTTAGATGGCCCTTGACAAAAGGCAAAAGCACAAAATATCATAAGTATCGGTTTGAATTGCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTATGTCCAACATTATTTGGGGCTGATAATACTAGTACAGTTGCCGAATAATATTAATAAGTCAGTGCGG  >  AM406671/796590‑796885

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.