| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | REL606 | 1,733,297 | (CGTATGAA)1→2 | coding (333/1413 nt) | pykF → | pyruvate kinase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 1733288 = | 44 (0.260) | 167 (1.060) | 62/68 | 0.1 | 83.4% | coding (324/1413 nt) | pykF | pyruvate kinase |
| ? | REL606 | = 1733295 | 25 (0.160) | coding (331/1413 nt) | pykF | pyruvate kinase | |||||
Only 100 of 184 total aligned reads displayed.
TGCCAACAGACAGGTCAGTAGTGAAACCTTCATACGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1733325‑1733288‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttCATACGTTACCGCAACCATTTCGCTGTTGCCGATAA < REL606/1733295‑1733260 TGCCAACAGACAGGTCAGTAGTGAAACCTTCATACGT > 1:10158184/1‑37TGCCAACAGACAGGTCAGTAGTGAAACCTTCATACGT > 2:3419192/1‑37TGCCAACAGACAGGTCAGTAGTGAAACCTTCATACGT < 2:6232753/37‑1 GCCAACAGACAGGTCAGTAGTGAAACCTTCATACGTT < 1:2145993/37‑1 GCCAACAGACAGGTCAGTAGTGAAACCTTCATACGTT < 1:3111984/37‑1 CCAACAGACAGGTCAGTAGTGAAACCTTCATACGTTC > 1:7091124/1‑37 CCAACAGACAGGTCAGTAGTGAAACCTTCATACGTTC > 1:314251/1‑37 CAACAGACAGGTCAGTAGTGAAACCTTCATACGTTCA > 1:7415070/1‑37 CAACAGACAGGTCAGTAGTGAAACCTTCATACGTTCA > 1:7840657/1‑37 CAACAGACAGGTCAGTAGTGAAACCTTCATACGTTCA > 2:8354281/1‑37 CAACAGACAGGTCAGTAGGGAAACCTTCATAAGTTCA > 2:5711624/1‑37 AACAGACAGGTCAGTAGTGAAACCTTCATACGTTCAT < 2:2231288/37‑1 AACAGACAGGTCAGTAGTGAAACCTTCATACGTTCAT < 1:4656034/37‑1 AACAGACAGGTCAGTAGTGAAACCTTCATACGTTCAT < 1:10139953/37‑1 ACAGACAGGTCAGTAGTGAAACCTTCATACGTTCATA < 1:2988229/37‑1 ACAGACAGGTCAGTAGTGAAACCTTCATACGTTCATA < 2:11027136/37‑1 ACAGACAGGTCAGTAGTGAAACCTTCATACGTTCATA < 2:10177934/37‑1 ACAGACAGGTCAGTAGTGAAACCTTCATACGTTCATA > 2:4860502/1‑37 ACAGACAGGTCAGTAGTGAAACCTTCATACGTTCATA < 2:4999958/37‑1 ACAGACAGGTCAGTAGTGAAACCTTCATACGTTCATA > 1:5520800/1‑37 ACAGACAGGTCAGTAGTGAAACCTTCATACGTTCATA > 2:520126/1‑37 ACAGACAGGGCAGTAGTGAAACCTTCATACGTTCATA > 1:10281593/1‑37 CAGACAGGTCAGTAGTGAAACCTTCATACGTTCATAC < 1:3824335/37‑1 CAGACAGGTCAGTAGTGAAACCTTCATACGTTCATAC > 2:2060781/1‑37 CAGACAGGTCAGTAGTGAAACCTTCATACGTTCATAC < 1:7997331/37‑1 AGACAGGTCAGTAGTGAAACCTTCATACGTTCATACG > 1:7780818/1‑37 GACAGGTCAGTAGTGAAACCTTCATACGTTCATACGT > 2:4571714/1‑37 ACAGGTCAGTAGTGAAACCTTCATACGTTCATACGTT < 1:994375/37‑1 ACAGGTCAGTAGTGAAACCTTCATACGTTCATACGTT > 1:9198733/1‑37 ACAGGTCAGTAGTGAAACCTTCATACGTTCATACGTT < 1:4804349/37‑1 ACAGGTCAGTAGTGAAACCTTCATACGTTCATACGTT < 1:619465/37‑1 CAGGTCAGTCGTGAAACCTTCATACGTTCATACGTTA < 1:558380/37‑1 CAGGTCAGTAGTGAAACCTTCATACGTTCATACGTTA > 2:10057260/1‑37 AGGTCAGTAGTGAAACCTTCATACGTTCATACGTTAC < 1:4417791/37‑1 AGGTCAGTAGTGAAACCTTCATACGTTCATACGTTAC > 1:8444204/1‑37 AGGTCAGTAGTGAAACCTTCATACGTTCATACGTTAC > 2:1573589/1‑37 AGGTCAGTAGTGAAACCTTCATACGTTCATACGCTAC > 2:6758301/1‑37 GGTCAGTAGTGAAACCTTCATACGTTCATACGTTACC > 2:3394677/1‑37 GGTCAGTAGTGAAACCTTCATACGTTCATACGTTACC > 2:10970601/1‑37 GGTCAGTAGTGAAACCTTCATACGTTCATACGTTACC < 1:8802019/37‑1 GGTCAGTAGTGAAACCTTCATACGTTCATACGTTACC > 1:8177997/1‑37 GGTCAGTAGTGAAACCTTCATACGTTCATACGTTACC > 1:114275/1‑37 GTCAGTAGTGAAACCTTCATACGTTCATACGTTACCG > 2:3815429/1‑37 GTCAGTAGTGAAACCTTAATACGTTCATACGTTACCG > 1:3588490/1‑37 TCAGTAGTGAAACCTTCATACGTTCATACGTTACCGC > 2:4582642/1‑37 TCAGTAGTGAAACCTTCATACGTTCATACGTTACCGC < 1:2424569/37‑1 TCAGTAGTGAAACCTTCATACGTTCATACGTTACCGC > 2:2191455/1‑37 TCAGTAGTGAAACCTTCATACGTTCATACGTTACCGC > 1:4572057/1‑37 CAGTAGTGAAACCTTCATACGTTCATACGTTACCGCA > 2:7048508/1‑37 CAGTAGTGAAACCTTCATACGTTCATACGTTACCGCA > 2:10481213/1‑37 CAGTAGTGAAACCTTCATACGTTCATACGTTACCGCA < 1:4459071/37‑1 GTAGTTAAACCTTCATACGTTCCTACGTTCCCGCAAC < 1:9656832/37‑1 GTAGTGAAACCTTCATACGTTCATACGTTACCGCAAC < 2:4404044/37‑1 AGTGAAACCTTCATACGTTCATACGTTACCGCAACCA < 2:8532045/37‑1 AGTGAAACCTTCATACGTTCATACGTTACCGCAACCA < 1:9447505/37‑1 TGAAACCTTCATACGTTCATACGTTACCGCAACCATT < 2:5520566/37‑1 GAAACCTTCATACGTTCATACGTTACCGCAACCATTT > 1:1289333/1‑37 AAACCTTCATACGTTCATACGTTACCGCAACCATTTC > 2:4707994/1‑37 AAACCTTCATACGTTCATACGTTACCGCAACCATTTC < 1:8915953/37‑1 AAACCTTCATACGTTCATACGTTACCGCAACCATTTC > 2:8126965/1‑37 AAACCTTCATACGTTCATACGTTACCGCAACCATTTC < 2:3267398/37‑1 AACCTTCATACGTTCATACGTTACCGCAACCATTTCG < 2:6904817/37‑1 AACCTTCATACGTTCATACGTTACCGCAACCATTTCG < 2:3596166/37‑1 AACCTCCATACTTTCATACGTTACCGCACCCATTTCG < 1:9982849/37‑1 CCTTCATACGTTCATACGTTACCGCAACCATTTCGCT < 2:7630302/37‑1 CCTTCATACGTTCATACGTTACCGCAACCATTTCGCT > 2:2527260/1‑37 CTTCATACGTTCATACGTTACCGCAACCATTTCGCTG < 2:9879965/37‑1 CTTCATACGTTCATACGTTACCGCAACCATTTCGCTG > 1:6323871/1‑37 CTTCATACGTTCATACGTTACCGCAACCATTTCGCTG < 1:6836907/37‑1 CTTCATACGTTCATACGTTACCGCAACCATTTCGCTG > 1:4325047/1‑37 TTCATACGTTCATACGTTACCGCAACCATTTCGCTGT < 1:6601678/37‑1 TTCATACGTTCATACGTTACCGCAACCATTTCGCTGT < 1:6987572/37‑1 TCATACGTTCATACGTTACCGCAACCATTTCGCTGTT > 2:413987/1‑37 TCATACGTTCATACGTTACCGCAACCATTTCGCTGTT < 1:9039265/37‑1 TCATACGTTCATACGTTACCGCAACCATTTCGCTGTT > 2:2994915/1‑37 CATACGTTCATACGTTACCGCAACCATTTCTCTGTTG < 2:1934179/37‑1 CATACGTTCATACGTTACCGCAACCATTTCGCTGTTG > 1:5088783/1‑37 ATACGTTCATACGTTACCGCCACCATTTCGCTGTTGC > 1:5311400/1‑37 ATACGTTCATACGTTACCGCAACCATTTCGCTGTTGC > 2:1458690/1‑37 ATACGTTCATACGTTACCGCAACCATTTCGCTGTTGC < 2:5267228/37‑1 TACGTTCATACGTTACCTCAACCATTTCGCTGTTGCC < 1:249950/37‑1 TACGTTCATACGTTACCGCAACCATTTCGCTGTTGCC < 1:693371/37‑1 TACGTTCATACGTTACCGCAACCATTTCGCTGTTGCC < 1:2858591/37‑1 TACGTTCATACGTTACCGCAACCATTTCGCTGTTGCC > 2:1165708/1‑37 TACGTTCATACGTTACCGCAACCATTTCGCTGTTGCC < 1:2110213/37‑1 TACGTTCATACGTTACCGCAACCATTTCGCTGTTGCC < 1:891371/37‑1 ACGTTCATACGTTACCGCAACCATTTCGCTGTTGCCG > 2:555802/1‑37 CGTTCATACGTTACCGCAACCATTTCGCTTTTGCCGA < 1:9005068/37‑1 CGTTCATACGTTACCGCAACCATTTCGCTGTTGCCGA < 1:7155245/37‑1 GTTCATACGTTCCCGCAACCATTTCGCTGTTGCCGAT > 2:7145876/1‑37 GTTCATACGTTACCGCAACCATTTCGCTGTTGCCGAT < 2:6889966/37‑1 GTTCATACGTTACCGCAACCATTTCGCTGTTGCCGAT < 2:7334823/37‑1 GTTCATACGTTACCGCAACCATTTCGCTGTTGCCGAT > 2:3982839/1‑37 GTTCATACGTTACCGCAACCATTTCGCTGTTGCCGAT < 1:10999226/37‑1 GTTCATACGTTACCGCAACCATTTCGCTGTTGCCGAT > 2:3513104/1‑37 TTCATACGTTCCCGCGACCATTTCGCTGTTGCCGATA < 1:4269565/37‑1 TTCATACGTTACCGCAACCATTTCGCTGTTGCCGATA < 2:8788273/37‑1 TTCATACGTTACCGCAACCATTTCGCTGTTGCCGATA > 2:9630139/1‑37 TCATACGTTACCGCAACCATTTCGCTGTTGCCGATAA > 1:7533943/1‑37 TCATACGTTACCGCAACCATTTCGCTGTTGCCGATAA < 2:9530384/37‑1 TGCCAACAGACAGGTCAGTAGTGAAACCTTCATACGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1733325‑1733288‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttCATACGTTACCGCAACCATTTCGCTGTTGCCGATAA < REL606/1733295‑1733260 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |