mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal read alignment evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | REL606 | 4,393,061 | 0 | T | G | 33.3% | 29.7 / 10.9 | 24 | V211G (GTG→GGG) | aidB | isovaleryl CoA dehydrogenase |
| * | REL606 | 417,321 | 0 | T | G | 31.0% | 39.5 / 12.0 | 29 | T27P (ACA→CCA) | ECB_00378 | conserved hypothetical protein |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 1496952 = | 35 (1.460) | 3 (0.140) | 3/134 | 3.0 | 8.9% | coding (594/618 nt) | yncG | predicted enzyme |
| ? | REL606 | 1497195 = | 30 (1.410) | coding (144/213 nt) | yncH | hypothetical protein | |||||
| * | ? | REL606 | 293767 = | 24 (1.000) | 4 (0.180) | 3/142 | 3.2 | 12.8% | intergenic (+37/‑490) | ykgD/ykgE | predicted DNA‑binding transcriptional regulator/predicted oxidoreductase |
| ? | REL606 | 293978 = | 32 (1.420) | intergenic (+248/‑279) | ykgD/ykgE | predicted DNA‑binding transcriptional regulator/predicted oxidoreductase | |||||