| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 312594 = | 234 (1.490) | 77 (0.490) | 10/150 | 10.4 | 21.0% | intergenic (+202/‑220) | yahG/yahI | hypothetical protein/predicted carbamate kinase‑like protein |
| ? | REL606 | = 2583282 | 345 (2.190) | coding (741/741 nt) | yfhQ | predicted methyltransferase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Only 100 of 235 total aligned reads displayed.
CTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGTGGCGCGAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAG > REL606/312519‑312669 | cTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGcc > 1:2913273/1‑76 (MQ=39) aTCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGa > 1:3599879/1‑76 (MQ=39) aTCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGa > 2:3091666/1‑76 (MQ=39) aTCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGa > 1:3914660/1‑76 (MQ=39) tCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGAt > 1:1229283/1‑76 (MQ=39) tCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGAt < 2:443278/76‑1 (MQ=39) tCCGGCCTACGAATGGCGAAAGAATCTGTAGGCCTGATAAGCTTAGCGCATCAGGCATTTGCCACCACTGCCGGAt < 1:4741995/76‑1 (MQ=255) ccgggCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGAt < 2:1436718/73‑1 (MQ=255) ccGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATg > 1:5102616/1‑76 (MQ=39) cGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATgc > 2:2767024/1‑76 (MQ=39) ccTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATgcggc < 2:571806/76‑1 (MQ=39) ccTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATgcggc > 2:1029848/1‑76 (MQ=39) ccTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATgcggc > 1:1589627/1‑76 (MQ=39) aCGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGCTACAGCGTg > 2:2497995/1‑76 (MQ=14) aCGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTg > 1:2003047/1‑76 (MQ=39) aCGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTg > 2:4927815/1‑76 (MQ=39) cGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTgg > 2:1832796/1‑76 (MQ=40) cGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGAAGCGGCGTgg > 2:4448381/1‑76 (MQ=255) agtGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGAc < 2:4835967/74‑1 (MQ=255) aaTGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGAc > 2:3815391/1‑76 (MQ=255) aaTGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCCGCGTCGAc > 2:3404698/1‑76 (MQ=255) gcAAGAATCTGTAGGCCTGGTAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGAAGCCttt > 2:2353535/1‑75 (MQ=255) gcAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCTTa < 1:5008/76‑1 (MQ=255) cAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCTTAt < 2:5161604/76‑1 (MQ=255) cAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTCGGCGGCttgt > 2:805053/1‑74 (MQ=14) aGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCTTATcc < 2:1695074/76‑1 (MQ=255) aaTCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCTTATCCgg < 1:3524996/76‑1 (MQ=255) aTCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCCTTTCCGGc > 2:2265047/1‑76 (MQ=255) ttgtgGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCt < 2:3896420/75‑1 (MQ=255) cggTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCt < 2:455590/74‑1 (MQ=255) cggTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCt < 2:5185907/74‑1 (MQ=255) cTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCt < 2:4586974/76‑1 (MQ=255) cTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCt < 2:4776016/76‑1 (MQ=255) cTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCt < 2:1662352/76‑1 (MQ=255) cTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCt < 1:2763199/76‑1 (MQ=255) tgtgGGCCTTATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTa < 2:687685/76‑1 (MQ=255) tGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTa < 2:4147429/76‑1 (MQ=255) tGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTa < 2:5171345/76‑1 (MQ=255) gTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTAc > 2:641695/1‑76 (MQ=255) gTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTAc > 2:3071254/1‑76 (MQ=255) gTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTAc < 2:550424/76‑1 (MQ=255) gTAGGCCTGATAAGCGTAGCGCATCAGGCATTTCCCACCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTAc < 2:2681282/76‑1 (MQ=255) tAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGGCGCCCTTTCCGGCCCAcc > 1:197732/1‑75 (MQ=14) tAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCTTATTCGGCCTACg > 2:3948113/1‑76 (MQ=255) tAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTACg < 2:3241696/76‑1 (MQ=255) tAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTACg < 1:4319681/76‑1 (MQ=255) gaGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTACg < 2:5081828/75‑1 (MQ=255) gCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCGCAGCCTGCCTTCGAgg > 1:1915561/1‑75 (MQ=14) gCCTGATAAGCGCAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTACGAgg > 2:3050729/1‑75 (MQ=255) gCCTAATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGt < 1:2674725/76‑1 (MQ=255) ccTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTACGAggg > 2:4899992/1‑74 (MQ=255) ccTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTACGAggg > 1:4847129/1‑74 (MQ=255) cggATGAGCGTGGCGCATCAGGCTTTTCCCACCACTGCCGGATGCGGCGTGGACGCCTTTTCCGGCCTACGAGTgg < 2:3797847/74‑1 (MQ=14) cTGATAAGCGTAGCGAATAGGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGTgg < 2:1066658/76‑1 (MQ=14) tGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGTGgc > 1:1163309/1‑76 (MQ=255) tAAGCGTATCGCATCGGGCGTTTGCCACCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGTGGcgcg < 2:2031098/76‑1 (MQ=14) tAAGCGTAGCGCATCAGGCATTTGCCACCACTGcc < 2:3559904/35‑1 (MQ=255) tAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGTGGcgcg < 1:1002468/76‑1 (MQ=255) tAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCCTATCCGGCCTACGAGAGGcgcg > 1:3738226/1‑76 (MQ=255) tAAGCGGAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGTGGcgcg < 1:5132045/76‑1 (MQ=255) aaGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGGGGcgcgg > 2:857762/1‑75 (MQ=255) aaGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGGGGGGCga > 1:591286/1‑76 (MQ=255) aaGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACCGCTTATCCGGCCTACGAGCGGCGCga > 2:3780657/1‑76 (MQ=14) aGCGTAGCGCATCGGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGTGGCGCgag < 2:373549/76‑1 (MQ=255) cGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGTGGCGCGAGaa < 1:4172423/76‑1 (MQ=255) gTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGTGGGGCGGGAAt > 1:806603/1‑76 (MQ=255) gTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCCACGAGTGGCGCGCGaaa > 1:1408963/1‑75 (MQ=255) aGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGTGGCGCGAGAATCt > 2:1207625/1‑76 (MQ=255) cgcATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGTGGCGCGGGAATCTGt > 1:3154775/1‑76 (MQ=255) cgcATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGTGGCGCGAGAATCTGt < 2:1943302/76‑1 (MQ=255) cATCGGGCTTTTGCCACCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGTGGCGCGAGAATCTGTAg < 1:3957635/76‑1 (MQ=255) cATCACGCATTTGCCCCCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGTGGCGCGAGAATCTGTAg < 1:4887316/76‑1 (MQ=255) tCAGGCGTTTCCCACCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGTGGCGCGAGAATCTGTAGGc < 2:4377635/76‑1 (MQ=255) tCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGTGGCGCGAGAATCTGTAGGc > 1:713277/1‑76 (MQ=255) cAGGCTTTTGCCCCCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGTGGCGCGAGAATCTGTAGGcc < 2:2994530/76‑1 (MQ=255) cAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGGGGCGCGAGAATCTGTAGGcc > 1:2313767/1‑76 (MQ=255) ggCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGTGGCGCGAGAATCTGTAGGccgt > 2:4660022/1‑74 (MQ=255) ggCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGTGGCGCGAGAATCTGTAGGCCTg > 2:2465835/1‑76 (MQ=255) gCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGTGGCGCGAGAATCTGTAGGCCTGa > 2:4502271/1‑76 (MQ=255) ttttGCCACCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGTGGCGCGAGAATCTGTAGGCCTGATa < 1:2730187/75‑1 (MQ=255) aTTTGCCACCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGTGGCGCGAGAATCTGTAGGCCTGATa < 2:2550941/76‑1 (MQ=255) tttGCCACCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGTGGCGCGAGAATCTGTAGGCCTGATaa < 2:1976496/76‑1 (MQ=255) ttcccacccCTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGTGGCGCGAGAATCTGTAGGCCTGATAAg < 2:4296773/73‑1 (MQ=255) ttGCCACCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGTGGCGCGAGAATCTGTAGGCCTGATAAg > 2:4230224/1‑76 (MQ=255) cccaccaCTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGTGGCGCGAGAATCTGTAGGCCTGATAAGCg < 1:3036787/75‑1 (MQ=255) ccccacTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGTGGCGCGAGAATCTGTAGGCCTGATAAGCGTa < 1:3573895/74‑1 (MQ=255) cacctcTGCGGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGTGGCGCGAGAATCTGTAGGCCTGATAAGCGTa < 1:2881998/76‑1 (MQ=255) caccacTGCCGGATGCGGCGTGGACGCCTTATTCGGCCTACGAGTGGCGCGAGAATCTGTAGGCCTGATAAGCGTa > 2:5042468/1‑76 (MQ=255) caccacTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGTGGCGCGAGAATCTGTAGGCCTGATAAGCGTa > 1:1325942/1‑76 (MQ=255) caccacTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGTGGCGCGAGAATCTGTAGGCCTGAAAAGCgga > 2:3256687/1‑74 (MQ=255) caccacGGCCGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGTGGCGCGAGAATCTGTAGGCCTGATAAGCGTa < 2:1480634/76‑1 (MQ=255) tccacTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGTGGCGCGAGAATCTGTAGGCCTGATAAGCGTAg < 1:4565163/75‑1 (MQ=255) accacTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGTGGCGCGAGAATCTGTAGGCCTGAAAAGCGTAg > 1:3508340/1‑76 (MQ=255) cacTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGTGGCGCGAGAATCTGTAGGCCTGATAAGCGTAgcg > 2:882649/1‑76 (MQ=255) cacTGCAGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGTGGCGCGAGAATCTGTAGGCCTGATAAGCGTAgcg > 2:4374433/1‑76 (MQ=255) tGCGGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGTGGCGCGAGAATCTGTAGGCCTGATAAGCGTAGCGCAt < 2:4847129/76‑1 (MQ=255) gCCGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGTGGCGCGAGAATCTGTAGGCCTGATAAGCGTAGCGCATc > 2:1906502/1‑76 (MQ=255) ccGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGTGGCGCGAGAATCTGTAGGCCTGATAAGCGTAGCGCATCa < 1:2458330/76‑1 (MQ=255) ccGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGTGGCGCGAGAATCTGTAGGCCTGATAAGAGTAGCGCATCa > 2:3487107/1‑76 (MQ=255) ccGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGGGGCGCGAGAATCTGTAGGCCTGATAAGCGTAGCGCACCa > 2:1161156/1‑76 (MQ=255) | CTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGTGGCGCGAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAG > REL606/312519‑312669 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |