| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 312594 = | 234 (1.490) | 77 (0.490) | 10/150 | 10.4 | 21.0% | intergenic (+202/‑220) | yahG/yahI | hypothetical protein/predicted carbamate kinase‑like protein |
| ? | REL606 | = 2583282 | 345 (2.190) | coding (741/741 nt) | yfhQ | predicted methyltransferase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Only 100 of 345 total aligned reads displayed.
GCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTT > REL606/2583208‑2583357 | tccTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGtt < 2:1116660/75‑1 (MQ=14)gCCTTATCCGCCCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGtt < 2:657393/76‑1 (MQ=14)gCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGtt < 2:1016263/76‑1 (MQ=31)cccTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGtt < 2:3692577/75‑1 (MQ=14) ccTTATCCGCCCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTa < 2:1734197/76‑1 (MQ=17) ccTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTa < 2:3487488/76‑1 (MQ=32) cTTATCCGCCCTAGGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTAt < 2:1495497/76‑1 (MQ=255) cTTATCCGCCCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTAt < 2:545566/76‑1 (MQ=21) cTTATCCGCCCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTAt < 1:3268012/76‑1 (MQ=21) cTTATCCGCCCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTAt < 2:4051621/76‑1 (MQ=21) cTTATCCGCCCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTAt < 2:1027349/76‑1 (MQ=21) cTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTAt < 2:2517013/76‑1 (MQ=34) ttATCCGCCCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTAtt < 2:2799905/76‑1 (MQ=25) ttATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTAtt < 1:3737897/76‑1 (MQ=35) ttATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGGTAtt > 2:2037745/1‑76 (MQ=17) aTCCGCCCTGCGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCg < 2:1567448/76‑1 (MQ=255) aTCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGGTATTCg > 2:3325436/1‑76 (MQ=25) tCCGGCCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCgg < 2:4660253/76‑1 (MQ=255) tCCGCCCTGCGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCgg < 2:1348414/76‑1 (MQ=255) tCCGCCCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCgg < 2:953309/76‑1 (MQ=255) tCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCgg > 1:699855/1‑76 (MQ=40) ccGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGc < 1:425464/76‑1 (MQ=255) cgcccTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGcc < 2:4842283/73‑1 (MQ=255) gcccTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCt < 1:747592/74‑1 (MQ=255) aCCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCtt < 2:2456620/76‑1 (MQ=255) aCCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCtt < 1:1794545/76‑1 (MQ=255) cTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGGTATTCGGCCTTGt > 2:3087532/1‑76 (MQ=255) tgcGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGtt < 1:5157898/74‑1 (MQ=255) tACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGtt < 2:2272931/76‑1 (MQ=255) tACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGtt > 1:625750/1‑76 (MQ=255) tACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGtt < 1:5022952/76‑1 (MQ=255) aCGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTa < 1:1334864/76‑1 (MQ=255) gTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCt < 1:1992093/76‑1 (MQ=255) ttCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGGTATTCGGCCTTGTTACCtt > 2:862903/1‑76 (MQ=255) tCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCttt < 1:1459767/76‑1 (MQ=255) tGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGGATCAGGCAACGGCTGTTATTCAGGCCTGTTGCCttttt > 1:4623460/1‑74 (MQ=14) tGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGGTATTCGGGCTTGTTACCTTTAt > 1:3320371/1‑76 (MQ=255) gTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTAtt < 1:2103420/76‑1 (MQ=255) gTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGGTATTCCGCCTTGTTATCTTTAtt > 2:4200414/1‑76 (MQ=17) ttCACTGTAGGCCTGATAAGACGCAATACGCGTCGTATCAGGCAACGGCTGTTATTCGGCGCTGTTACCttttttt > 2:5121982/1‑75 (MQ=17) cACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTctg < 2:3006777/76‑1 (MQ=255) cACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTctg < 2:1274681/76‑1 (MQ=255) aCTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTctgc < 2:3127067/76‑1 (MQ=255) tGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGGCTTGTTACCTTTATTctgctg > 1:3919302/1‑76 (MQ=255) tGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTctgctg < 2:4622287/76‑1 (MQ=255) gTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGtt < 2:3566921/47‑1 (MQ=32) gTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCtgctgc > 1:1144475/1‑76 (MQ=255) gTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCCTGTTTACTTTTTTTtgctgc > 2:2646643/1‑76 (MQ=17) tAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGGTATTCGGCCTTGTTACCTTTATTCTgctgct > 2:507156/1‑76 (MQ=255) aGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTc > 2:3583125/1‑76 (MQ=255) gCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCaa < 1:2779067/76‑1 (MQ=255) ccTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAAt < 1:3628132/76‑1 (MQ=255) ccTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAAt < 2:3275442/76‑1 (MQ=255) cTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATa < 1:4536166/76‑1 (MQ=255) cTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGGTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATa > 2:927136/1‑76 (MQ=255) tGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTGGTTGGCCCTGTTACCCTTTTTCTGCTGCTCAATAg > 2:2195391/1‑76 (MQ=18) tGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAg < 1:2900751/76‑1 (MQ=255) tGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAg < 1:2195391/76‑1 (MQ=255) tGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAg > 1:4663580/1‑76 (MQ=255) tGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGGTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAg > 2:4966229/1‑76 (MQ=255) gATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGa > 2:4741215/1‑76 (MQ=255) aTAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTTTTCCGGCTTCTTGTCTTTTTTCTGCTGCTCAATATaa > 2:3381710/1‑76 (MQ=17) tAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAg > 2:1646002/1‑76 (MQ=255) tAAGACGCATTACGCGTCGCATCAGGCAACGGCTGGGATTCGGTCTTTTTACCTTTATTTTGCCGCTCAATAGatg > 2:411336/1‑74 (MQ=18) aaGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTTGGAATTGTTACCTTTTTTCTGCTGCTCCATAGAAGc > 2:2387917/1‑76 (MQ=21) aaGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTTTTCTGCTGCTCAATAGaaac > 2:3533009/1‑74 (MQ=255) aaGACGCATTACGCGTCGCATCAGGCAACGGCTGGTATTCGGCCTTTTTACCTTTTTTTTGCTGCTCCCTAGAAGc > 2:4334628/1‑76 (MQ=21) aGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGcc < 1:581111/76‑1 (MQ=255) cGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGa < 1:3810735/76‑1 (MQ=255) aTTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATc < 2:1313546/76‑1 (MQ=255) aTTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATc > 1:1713894/1‑76 (MQ=255) tACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATccc > 2:3883330/1‑76 (MQ=255) aCGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCcg < 1:1007692/76‑1 (MQ=255) gcgTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCcgcg < 1:1545379/76‑1 (MQ=255) cgTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCgcgc < 1:4434041/76‑1 (MQ=255) cGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAgg < 1:4342419/76‑1 (MQ=255) cGCAGCAGTCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAgg < 1:879528/76‑1 (MQ=255) cATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGat < 2:4488138/76‑1 (MQ=255) cATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGat < 1:2439986/76‑1 (MQ=255) cATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGat < 1:4937100/76‑1 (MQ=255) cATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGat < 1:4572157/76‑1 (MQ=255) tCAGCCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGatat < 2:3926152/76‑1 (MQ=255) cAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATAtt < 1:3436790/76‑1 (MQ=255) aGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTc < 1:1086503/76‑1 (MQ=255) aGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTc < 1:3533179/76‑1 (MQ=255) aGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTc > 1:4875849/1‑76 (MQ=255) ggCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCa < 2:625750/76‑1 (MQ=255) ggCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCa < 1:4193424/76‑1 (MQ=255) cAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAAc > 1:1638552/1‑76 (MQ=255) aaCGGCTGGGGTTTGGGCTTTTTTCCTTTATTCTTCTGCTCAATAGAAGCCAGAATCACCCGCAGGGTATTCaaat > 2:570766/1‑74 (MQ=255) gCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTg < 2:3658603/76‑1 (MQ=255) gCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTg > 1:2637104/1‑76 (MQ=255) cTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTgg > 2:2699151/1‑76 (MQ=255) tGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTGGc < 2:2893584/76‑1 (MQ=255) tGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTGGc < 1:3101207/76‑1 (MQ=255) gTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCt > 2:2847351/1‑76 (MQ=255) gTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCt > 1:1921371/1‑76 (MQ=255) ttATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCtt > 2:2076518/1‑76 (MQ=255) ttATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCtt > 2:1804490/1‑76 (MQ=255) ttATTCGGCCTTGTTACCTCTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCtt > 2:793813/1‑76 (MQ=255) | GCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTT > REL606/2583208‑2583357 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |