| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | REL606 | 433,584 | Δ16 bp | coding (79‑94/273 nt) | hupB → | HU, DNA‑binding transcriptional regulator, beta subunit |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | REL606 | 433584 | 433599 | 16 | 362 [0] | [2] 364 | hupB | HU, DNA‑binding transcriptional regulator, beta subunit |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 433583 | 0 (0.000) | 358 (1.130) | 126/150 | 0.1 | 99.7% | coding (78/273 nt) | hupB | HU, DNA‑binding transcriptional regulator, beta subunit |
| ? | REL606 | 433600 = | 2 (0.010) | coding (95/273 nt) | hupB | HU, DNA‑binding transcriptional regulator, beta subunit | |||||
Only 100 of 358 total aligned reads displayed.
AATAAATCTCAATTGATCGACAAGATTGCTGCAGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/433509‑433583‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGTGCTG > REL606/433600‑433674 AATAAATCTCAATTGATCGACAAGATTGCTGCAGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATT > 2:9460461/1‑76 TAAATCTCAATTGATCGACAAGATTGCTGCAGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAA < 1:4075633/76‑1 ATCTCAATTGATCGACAAGATTGCTGCAGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTG > 2:857939/1‑76 TCTCAATTGATCGACAAGATTGCTGCAGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGA < 1:5700826/76‑1 CTCAATTGATCGACAAGATTGCTGCAGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAA > 1:1095743/1‑76 TCAATTGATCGACAAGATTGCTGCAGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAAATGAAT > 1:8093159/1‑76 CAATTGATCGACAAGATTGCTGCAGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATC > 1:10005272/1‑76 CAATTGATCGACAAGATTGCTGCAGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATC < 1:5671395/76‑1 CAATTGATCGACAAGATTGCTGCAGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATC < 2:4798879/76‑1 AATTGATCGACAAGATTGCTGCAGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTTAATCT > 2:7093281/1‑76 AATTGATCGACAAGATTGCTGCAGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGGTAGGTTAACTGAATCT > 1:1543334/1‑76 ATTGATCGACAAGATTGCTGCAGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTC < 1:9427387/76‑1 ATTGATCGACAAGATTGCTGCAGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTC < 1:4916026/76‑1 ATTGATCGACAAGATTGCTGCAGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTC > 1:4334337/1‑76 TGATCGACAAGATTGCTGCAGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTG > 2:4550456/1‑76 ATCGACAAGATTGCTGCAGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAA < 1:9916356/76‑1 ATCGACAAGATTGCTGCAGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAA < 2:3843813/76‑1 TCGACAAGATTGCTGCAGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAAA < 1:77463/76‑1 CGACAAGATTGCTGCAGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGGTTGACTTAATCTCTGAAAG > 1:2045001/1‑76 CGACAAGATTGCTGCAGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAAAG < 2:1279593/76‑1 CGACAAGATTGCTGCAGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAAAG > 1:2798367/1‑76 CGACAAGATTGCTGCAGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGGGCGTTAGATTAACTGAATCTCTGAAAG > 2:5329237/1‑76 GACAAGATTGCTGCAGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAAAGA > 1:3598012/1‑76 ACAAGATTGCTGCAGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAAAGAA > 1:2465781/1‑76 ACAAGATTGCTGCAGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGGTAGATTAACTGAATCTCTGAAAGAA > 1:4507330/1‑76 aacATTGCTGCAGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAAAGAAGG > 1:466353/4‑76 AGATTGCTGCAGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTTACTGAATCTCTGAAAGAAGGG > 2:9630877/1‑76 GATTGCTGCAGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAAAGAAGGGG < 1:3320912/76‑1 GATTGCTGCAGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAAAGAAGGGG < 1:6508972/76‑1 ATTGCTGCAGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAAAGAAGGGGA > 1:4291704/1‑76 ATTGCTGCAGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGGGCGTTTGATTAAATGAATCTCTGAAAGAAGGGGA > 2:1655347/1‑76 TTGCTGCAGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAAAGAAGGGGAT < 2:4885383/76‑1 TGCTGCAGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAAAGAAGGGGATG > 1:7533683/1‑76 TGCTGCAGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAAAGAAGGGGATG < 2:82796/76‑1 TGCTGCAGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGGTAGATTAACTGAATCTCTGAAAGAAGGGGATG > 2:3210866/1‑76 GCTGCAGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAAAGAAGGGGATGA > 1:4881428/1‑76 CTGCAGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAAAGAAGGGGATGAT > 1:2213009/1‑76 TGCAGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAAAGAAGGGGATGATG < 2:6546482/76‑1 GCAGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGGTAGGTTAACTGAATCTCTGAAAGAAGGGGATGATGa > 2:1025365/1‑75 CAGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAAAGAAGGGGATGATGTA < 1:6066101/76‑1 AGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAAAGAAGGGGGTGATGTAG > 2:9434001/1‑76 AGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAAAGAAGGGGATGATGTAG < 2:4193196/76‑1 AGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAAAGAAGGGGATGATGTAG < 2:9841942/76‑1 GGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGC < 1:5077300/76‑1 GGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGC < 2:1228153/76‑1 GGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCA < 2:1063745/76‑1 GGCTGATATCTCTAAAGCTGCGGCTGGCCGGGCGTTAGATTAACTGAATCTCTTAAAGAAGGGGATGATGAAGCcc > 1:1722090/1‑74 GCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACT > 2:5202839/1‑76 CTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTG > 2:7486553/1‑76 CTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTG > 2:2756174/1‑76 CTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTG > 2:618587/1‑76 TGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGG > 2:4969848/1‑76 TGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGG > 2:3071722/1‑76 TGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGG > 2:7751152/1‑76 TGATATCTCTAAAGCTGCGGCTGGCCGCGCGTTAGATTAACTGTATCTCTGAAAGAAGGGGATGTTGTTGCGCTtg > 2:8407670/1‑74 GATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGT > 1:10180309/1‑76 GATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGT > 1:9507905/1‑76 GATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGT > 1:6597857/1‑76 ATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTA > 1:3772573/1‑76 ATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTA > 1:7925637/1‑76 TATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAG < 2:1713759/76‑1 CTCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGgt > 2:8783507/1‑74 TCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTT < 1:8204077/76‑1 TCTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTT < 2:4614879/76‑1 CTAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTT < 1:5781868/76‑1 TAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTG < 2:7883515/76‑1 TAAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGGTTTG > 1:6305229/1‑76 AAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGGTTTtg > 2:633548/1‑74 AAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGGTTTGG > 1:4164591/1‑76 AAAGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGGAGGGGTTGG > 2:5616672/1‑76 AGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTA < 1:5442114/76‑1 AGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTA < 2:9073532/76‑1 AGCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTA < 2:2323829/76‑1 GCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTAC < 2:7653403/76‑1 GCTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGGTTTGGTAC > 2:1446299/1‑76 CTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGGTTTGGTACT > 1:909664/1‑76 CTGCGGCTGGCCGTGCGTTAGATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGGTTTGGTACT > 1:8440203/1‑76 TGGCCGTGCGTTAGATTAACTGAATCTCTGAAAGAAGGGGCTGATGTAGCACTGGTAGGCTTTGGTACTTTTGCCc > 2:4324239/1‑75 TGGCCGTGCGTTAGATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCG > 1:2699257/1‑76 GCCGTGCGTTAGATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTT > 2:6983145/1‑76 CGTGCGTTAGATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAA < 1:3180481/76‑1 GTGCGTTAGATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAA > 1:9198262/1‑76 CGTTAGATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAG > 2:3380721/1‑76 CGTTAGATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAG < 2:95791/76‑1 GTTAGATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGC > 2:3729019/1‑76 TTAGATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCG < 1:10301440/76‑1 TTAGATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCG > 1:9653584/1‑76 TAGATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGT < 2:577954/76‑1 TAGATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGT > 2:1977446/1‑76 TAGATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGT > 1:7254739/1‑76 TAGATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGT > 1:9233722/1‑76 TAGATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGT < 1:5275706/76‑1 AGATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGTG > 1:871355/1‑76 AGATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGTG > 2:10090524/1‑76 AGATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGTG > 2:1941879/1‑76 GATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGTGC < 1:7069624/76‑1 ATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGTGCT > 2:9182500/1‑76 ATTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGTGCT > 2:2521230/1‑76 TTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGTGCTG > 1:2325735/1‑76 TTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGTGCTG > 1:3556901/1‑76 AATAAATCTCAATTGATCGACAAGATTGCTGCAGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/433509‑433583‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGTGCTG > REL606/433600‑433674 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |