| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | REL606 | 433,584 | Δ16 bp | coding (79‑94/273 nt) | hupB → | HU, DNA‑binding transcriptional regulator, beta subunit |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | REL606 | 433584 | 433599 | 16 | 362 [0] | [2] 364 | hupB | HU, DNA‑binding transcriptional regulator, beta subunit |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 433583 | 0 (0.000) | 358 (1.130) | 126/150 | 0.1 | 99.7% | coding (78/273 nt) | hupB | HU, DNA‑binding transcriptional regulator, beta subunit |
| ? | REL606 | 433600 = | 2 (0.010) | coding (95/273 nt) | hupB | HU, DNA‑binding transcriptional regulator, beta subunit | |||||
Only 100 of 364 total aligned reads displayed.
TCGACAAGATTGCTGCAGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATGCTATTATTGCTTCCGTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGTGCTGC > REL606/433525‑433675 | aataaatctcaattgatcgacaagattgctgcaggggctgatatctctaaagctgcggctggccgtgcgttagatt > 2:9460461‑M2/76‑76 (MQ=255)aataaatctcaattgatcgacaagattgctgcaggggctgatatctctaaagctgcggctggccgtgcgttagatt < 2:5600065‑M2/1‑1 (MQ=255) taaatctcaattgatcgacaagattgctgcaggggctgatatctctaaagctgcggctggccgtgcgttagatTaa < 1:4075633‑M2/3‑1 (MQ=255) aaatctcaattgatcgacaagattgctgcaggggctgatatctctaaagctgcggctggccgtgcgttagatTAAc > 2:326102‑M2/73‑76 (MQ=255) aaatctcaattgatcgacaagattgctgcaggggctgatatctctaaagctgcggctggccgtgcgttagatTAAc > 1:7369698‑M2/73‑76 (MQ=255) aatctcaattgatcgacaagattgctgcaggggctgatatctctaaagctgcggctggccgtgcgttagatTAACt > 2:7680366‑M2/72‑76 (MQ=255) atctcaattgatcgacaagattgctgcaggggctgatatctctaaagctgcggctggccgtgcgttagatTAACTg > 2:857939‑M2/71‑76 (MQ=255) tctcaattgatcgacaagattgctgcaggggctgatatctctaaagctgcggctggccgtgcgttagatTAACTGa < 1:5700826‑M2/7‑1 (MQ=255) ctcaattgatcgacaagattgctgcaggggctgatatctctaaagctgcggctggccgtgcgttagatTAACTGaa > 1:1095743‑M2/69‑76 (MQ=255) ctcaattgatcgacaagattgctgcaggggctgatatctctaaagctgcggctggccgtgcgttagatTAACTGaa < 2:7805212‑M2/8‑1 (MQ=255) tcaattgatcgacaagattgctgcaggggctgatatctctaaagctgcggctggccgtgcgttagatTAAATGAAt > 1:8093159‑M2/68‑76 (MQ=255) caattgatcgacaagattgctgcaggggctgatatctctaaagctgcggctggccgtgcgttagatTAACTGAAtc > 1:10005272‑M2/67‑76 (MQ=255) caattgatcgacaagattgctgcaggggctgatatctctaaagctgcggctggccgtgcgttagatTAACTGAAtc < 2:4729292‑M2/10‑1 (MQ=255) attgatcgacaagattgctgcaggggctgatatctctaaagctgcggctggccgtgcgttagatTAACTGAAtctc > 1:4334337‑M2/65‑76 (MQ=255) ttgatcgacaagattgctgcaggggctgatatctctaaagctgcggctggacgtgcgtttgatTAACTGAATttct > 1:5176599‑M2/64‑76 (MQ=255) tgatcgacaagattgctgcaggggctgatatctctaaagctgcggctggccgggcgttagatTAACTTAATCTCTg > 2:4271378‑M2/63‑76 (MQ=255) atcgacaagattgctgcaggggctgatatctctaaagctgcggctggccgtgcgttagatTAACTGAATCTctgga > 2:2824188‑M2/61‑74 (MQ=255) atcgacaagattgctgcaggggctgatatctctaaagctgcggctggccgtgcgttagatTAACTGAATCTCTGaa < 1:2210281‑M2/16‑1 (MQ=255) tctacaagattgctgcaggggctgatatctctaaagctgcggctggccgtgcgttagatTAACTGAATCTCTGaaa < 2:1525437‑M2/17‑1 (MQ=255) tcgacaagattgctgcaggggctgatatctctaaagctgcggctggccgtgcgttagatTAACTGAATCTCTGaaa < 1:77463‑M2/17‑1 (MQ=255) cgacaagattgctgcaggggctgatatctctaaagctgcggctggccgtgcgttagatTAACTGAATCTCTGAaag > 1:2798367‑M2/59‑76 (MQ=255) gacaagattgctgcaggggctgatatctctaaagctgcggctggccgtgcgttagatTAACTGAATCTCTGAaaga > 1:3598012‑M2/58‑76 (MQ=255) acaagattgctgcaggggctgatatctctaaagctgcggctggccgtgcggtagatTAACTGAATCTCTGAaagaa > 1:4507330‑M2/57‑76 (MQ=255) aagattgctgcaggggctgatatctctaaagctgcggctggccgtgcgttagatTAACTGAATCTCTtaaagaaag > 2:3924531‑M2/55‑74 (MQ=255) aagattgctgcaggggctgatatctctaaagctgcggctggccgtgcgttagatTAACTGAATCTCTGGAAGAAgg > 2:1966400‑M2/55‑76 (MQ=255) agattgctgcaggggctgatatctctaaagctgcggctggccgtgcgttagatTTACTGAATCTCTGAAAGAAggg > 2:9630877‑M2/54‑76 (MQ=255) agattgctgcaggggctgatatctctaaagctgcggctggccgtgcgttagatTAACTGAATCTCTGAAAGAAggg > 2:1359946‑M2/54‑76 (MQ=255) gattgctgcaggggctgatatctctaaagctgcggctggccgtgcgttagatTAACTGAATCTCTGAAAGAAgggg < 1:6508972‑M2/24‑1 (MQ=255) gattgctgcaggggctgatatctctaaagctgcggctggccgtgcgttagatTAACTGAATCTCTGAAAGAAgggg < 1:3320912‑M2/24‑1 (MQ=255) attgctgcaggggctgatatctctaaagctgcggctggccgtgcgttagatTAACTGAATCTCTGAAAGAAGGGga > 1:4291704‑M2/52‑76 (MQ=255) attgctgcaggggctgatatctctaaagctgcggctggccgtgcgttagatTAACTGAATCTCTGAAAGAAGGGga < 2:7066774‑M2/25‑1 (MQ=255) tgctgcaggggctgatatctctaaagctgcggctggccgtgcgttagatTAACTGAATCTCTGAAAGAAGGGgatg > 1:7533683‑M2/50‑76 (MQ=255) gctgcaggggctgatatctctaaagctgcggctggccgtgcgttagatTAACTGAATCTCTGAAAGAAGGGgatga > 1:4881428‑M2/49‑76 (MQ=255) gctgcaggggctgatatctctaaagctgcggctggccgtgcgttagatTAACTGAATCTCTGAAAGAAGGGgatga < 2:1685655‑M2/28‑1 (MQ=255) tgcaggggctgatatctctaaagctgcggctggccgtgcgttagatTAACTGAATCTCTGAAAGAAGGGGatgatg > 1:4948637‑M2/47‑76 (MQ=255) tgcaggggctgatatctctaaagctgcggctggccgtgcgttagatTAACTGAATCTCTGAAAGAAGGGGatgatg < 2:6546482‑M2/30‑1 (MQ=255) caggggctgatatctctaaagctgcggctggccgtgcgttagatTAACTGAATCTCTGAAAGAAGGGGATGATGTa < 1:6066101‑M2/32‑1 (MQ=255) caggggctgatatctctaaagctgcggctggccgtgcgttagatTAACTGAATCTCTGAAAGAAGGGGATGATGTa > 2:9349643‑M2/45‑76 (MQ=255) aggggctgatatctctaaagctgcggctggccgtgcgttagatTAACTGAATCTCTGAAAGAAGGGGATGATGTAg < 2:9841942‑M2/33‑1 (MQ=255) ggggctgatatctctaaagctgcggctggccgtgcgttagatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGc < 2:4564309‑M2/34‑1 (MQ=255) ggggctgatatctctaaagctgcggctggccgtgcgttagatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGc > 2:4934679‑M2/43‑76 (MQ=255) ggggctgatatctctaaagctgcggctggccgtgcgttagatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGc < 1:9101491‑M2/34‑1 (MQ=255) ggggctgatatctctaaagctgcggctggccgtgcgttagatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGc < 1:9459568‑M2/34‑1 (MQ=255) ggctgatatctctaaagctgcggctggccgtgcgttagatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCAc < 1:9556177‑M2/36‑1 (MQ=255) ggctgatatctctaaagctgcggctggccgggcgttagatTAACTGAATCTCTTAAAGAAGGGGATGATGAagccc > 1:1722090‑M2/41‑74 (MQ=255) ctgatatctctaaagctgcggctggccgtgcgttagatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTg > 1:5495914‑M2/39‑76 (MQ=255) ctgatatctctaaagctgcggctggccgtgcgttagatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTg > 2:618587‑M2/39‑76 (MQ=255) gatatctctaaagctgcggctggccgtgcgttagatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGt > 1:10180309‑M2/37‑76 (MQ=255) gatatctctaaagctgcggctggccgtgcgttagatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGt < 2:10132124‑M2/40‑1 (MQ=255) gatatctctaaagctgcggctggccgtgcgttagatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGt > 1:6597857‑M2/37‑76 (MQ=255) atatctctaaagctgcggctggccgtgcgttagatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTa > 1:7925637‑M2/36‑76 (MQ=255) atatctctaaagctgcggctggccgtgcgttagatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTa > 1:3772573‑M2/36‑76 (MQ=255) atctctaaagctgcggctggccgtgcgttagatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAgg < 2:7280133‑M2/43‑1 (MQ=255) atctctaaagctgcggctggccgtgcgttagatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAgg > 1:4701802‑M2/34‑76 (MQ=255) tctctaaagctgcggctggccgtgcgttagatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGt < 2:4497354‑M2/44‑1 (MQ=255) tctaaagctgcggctggccgtgcgttagatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGttt < 2:3775178‑M2/46‑1 (MQ=255) ctaaagctgcggctggccgtgcgttagatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGtttt < 1:8796611‑M2/47‑1 (MQ=255) ctaaagctgcggctggccgtgcgttagatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGtttt < 1:5781868‑M2/47‑1 (MQ=255) taaagctgcggctggccgtgcgttagatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTg > 2:2287771‑M2/29‑76 (MQ=255) taaagctgcggctggccgtgcgttagatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGGTTTg > 1:6305229‑M2/29‑76 (MQ=255) taaagctgcggctggccgtgcgttagatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGGTTTg > 2:3676644‑M2/29‑76 (MQ=255) aaagctgcggctggccgtgcgttagatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAgggttttg > 2:633548‑M2/28‑74 (MQ=255) aaagctgcggctggccgtgcgttagatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTgg < 2:8751573‑M2/49‑1 (MQ=255) aaagctgcggctggccgtgcgttagatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGGTTTgg > 1:4164591‑M2/28‑76 (MQ=255) aagctgcggctggccgtgcgttagatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGt < 1:3523096‑M2/50‑1 (MQ=255) agctgcggctggccgtgcgttagatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTa < 1:2403388‑M2/51‑1 (MQ=255) agctgcggctggccgtgcgttagatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTa < 2:3080940‑M2/51‑1 (MQ=255) agctgcggctggccgtgcgttagatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTa < 2:9073532‑M2/51‑1 (MQ=255) gctgcggctggccgtgcgttagatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTAc < 2:7653403‑M2/52‑1 (MQ=255) ctgcggctggccgtgcgttagatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGGTTTGGTACt > 1:8440203‑M2/24‑76 (MQ=255) tgcggctggccgtgcgttagatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACtt < 2:799219‑M2/54‑1 (MQ=255) tgcggctggccgtgcgttagatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACtt < 2:5353969‑M2/54‑1 (MQ=255) cggctggccgtgcgttagatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACtttt < 1:5616672‑M2/56‑1 (MQ=255) tggccgtgcgttagatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCg < 1:9255972‑M2/60‑1 (MQ=255) tggccgtgcgttagatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCg > 1:2699257‑M2/17‑76 (MQ=255) ggccgtgcgttagatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGt > 1:184370‑M2/16‑76 (MQ=255) gccgtgcgttagatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGtt < 2:1072199‑M2/62‑1 (MQ=255) cgtgcgttagatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTaa > 1:9952460‑M2/13‑76 (MQ=255) cgtgcgttagatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTaa < 2:1266034‑M2/64‑1 (MQ=255) cgtgcgttagatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTaa < 1:3180481‑M2/64‑1 (MQ=255) gtgcgttagatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTaaa > 1:9198262‑M2/12‑76 (MQ=255) tgcgttagatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAag > 2:8392699‑M2/11‑76 (MQ=255) gcgttagatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAaga < 2:2453791‑M2/67‑1 (MQ=255) cgttagatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAagag < 2:95791‑M2/68‑1 (MQ=255) gttagatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGc > 1:8245184‑M2/8‑76 (MQ=255) ttagatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCg > 1:9799431‑M2/7‑76 (MQ=255) ttagatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCg < 1:10301440‑M2/70‑1 (MQ=255) tagatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGt < 2:577954‑M2/71‑1 (MQ=255) tagatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGt < 2:5151645‑M2/71‑1 (MQ=255) tagatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGt < 1:5275706‑M2/71‑1 (MQ=255) agatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGtg < 2:4833141‑M2/72‑1 (MQ=255) agatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGtg < 2:2600099‑M2/72‑1 (MQ=255) agatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGtg < 2:10296736‑M2/72‑1 (MQ=255) agatTAACCGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGtg > 2:1820658‑M2/5‑76 (MQ=255) gatTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGtgc < 1:7069624‑M2/73‑1 (MQ=255) atTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGtgct > 2:9182500‑M2/3‑76 (MQ=255) tTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGtgctg > 1:2325735‑M2/2‑76 (MQ=255) tAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGtgctgc > 2:6746463/1‑76 (MQ=255) tAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGtgctgc > 1:1528076/1‑76 (MQ=255) tAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGGTTTGGTACTTTTGCCGTTAAACAGAGtgctga > 2:5250635/1‑75 (MQ=38) | TCGACAAGATTGCTGCAGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATGCTATTATTGCTTCCGTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGTGCTGC > REL606/433525‑433675 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |