| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 880528 = | 240 (1.260) | 6 (0.040) | 6/122 | 15.7 | 3.4% | intergenic (+17/+163) | ybjK/ECB_00814 | predicted DNA‑binding transcriptional regulator/conserved hypothetical protein |
| ? | REL606 | = 904682 | 149 (0.960) | intergenic (+77/+159) | ECB_00851/ybjL | protein similar to prophage P2 OGR protein/hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 189 total aligned reads displayed.
GCTGCCGCCATTTTGTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGG‑ACATCAAAGAAAAG > REL606/904607‑904757 | gCTGCCGCCATTTTGTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGc < 2:4247350/76‑1 (MQ=255) cTGCCGCCATTTTGTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGca > 1:6286259/1‑76 (MQ=255) ccgccATTTTGTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGcaaca < 1:1032830/76‑1 (MQ=255) ccgccATTTTGTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGcaaca > 2:5892445/1‑76 (MQ=255) ccgccATTTTGTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGcaaca < 2:5330105/76‑1 (MQ=255) ccgccATTTTGTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGcaaca < 2:3438742/76‑1 (MQ=255) ccgccATTTTGTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGcaaca > 1:3622081/1‑76 (MQ=255) gccATTTTGTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACaaa > 2:3485486/1‑76 (MQ=255) gccATTTTGTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACaaa > 1:569253/1‑76 (MQ=255) ccATTTTGTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACaaaa < 1:307460/76‑1 (MQ=255) ccATTTTGTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACaaaa < 1:4832863/76‑1 (MQ=255) cATTTTGTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACaaaaa < 1:1522118/76‑1 (MQ=255) cATTTTGTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACaaaaa > 1:4337112/1‑76 (MQ=255) aTTTTGTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACaaaaaa < 1:5759462/76‑1 (MQ=255) aTTTTGTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACaaaaaa < 1:3837514/76‑1 (MQ=255) ttttGTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAAc < 2:900323/76‑1 (MQ=255) ttttGTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAAc > 1:2662484/1‑76 (MQ=255) tttGTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAAcc > 1:2374212/1‑76 (MQ=255) tttGTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAAcc < 2:3104875/76‑1 (MQ=255) ttGTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAAccc > 1:1908169/1‑76 (MQ=255) tGTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCa < 2:578487/76‑1 (MQ=255) tGTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCa > 2:2950921/1‑76 (MQ=255) gTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCAt > 2:5494356/1‑76 (MQ=255) gTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCAt > 2:1066267/1‑76 (MQ=255) cGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTTAAGAGCATAAATTTCAGGCAACAAAAAACCCATCa < 2:4734517/76‑1 (MQ=255) cGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCa < 1:5774981/76‑1 (MQ=255) cGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCa < 1:605476/76‑1 (MQ=255) cGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCa < 1:2566036/76‑1 (MQ=255) cGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCa < 2:4879741/76‑1 (MQ=255) cGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCa < 1:3448119/76‑1 (MQ=255) gCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCaa < 1:2419337/76‑1 (MQ=255) gCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCaa < 2:3071280/76‑1 (MQ=255) gCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCaa < 2:1470269/76‑1 (MQ=255) aTCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCt > 1:4379398/1‑76 (MQ=255) aTCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCt > 1:1996433/1‑76 (MQ=255) tCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCtt > 1:6111381/1‑76 (MQ=255) cGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTg > 1:3507060/1‑76 (MQ=255) cGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTg > 1:498190/1‑76 (MQ=255) ttAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGaa < 1:4699454/76‑1 (MQ=255) ttAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGaa < 1:1653245/76‑1 (MQ=255) ttAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGaa > 1:4420707/1‑76 (MQ=255) ttAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGaa > 1:3690376/1‑76 (MQ=255) tAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAAc > 2:3986395/1‑76 (MQ=255) aaaaaCAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCg > 2:2889932/1‑76 (MQ=255) aaaaaCAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCg > 2:3229854/1‑76 (MQ=255) aaaaCAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGa > 2:4457554/1‑76 (MQ=255) aaaaCAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGa > 2:1335311/1‑76 (MQ=255) aaaCAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGaa > 2:1012012/1‑76 (MQ=255) aaCAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTGAGGCAACAAAAAACCCATCAACCTTGAACCGaaa > 1:1000646/1‑76 (MQ=255) aaCAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGaaa < 1:1792387/76‑1 (MQ=255) aCAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAAt > 1:4576113/1‑76 (MQ=255) gTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGc > 1:1492076/1‑76 (MQ=255) tGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCg > 2:5167193/1‑76 (MQ=255) cTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCggg > 1:5744935/1‑76 (MQ=255) cTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCggg < 1:737098/76‑1 (MQ=255) cTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCgggggg > 1:3798280/1‑74 (MQ=255) cTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGtt < 1:1131564/76‑1 (MQ=255) cTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGtt < 2:3140550/76‑1 (MQ=255) aCATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGAt < 1:80270/76‑1 (MQ=255) catGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGc < 1:531899/76‑1 (MQ=255) catGANTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGATGGGc > 2:219746/1‑76 (MQ=255) atGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCt < 1:1214300/76‑1 (MQ=255) gATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTcc < 1:1503792/76‑1 (MQ=255) gATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTcc < 2:4479013/76‑1 (MQ=255) aTTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGGTGGGGTccc > 2:6149828/1‑75 (MQ=255) aTTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCca < 2:2759215/76‑1 (MQ=255) ttttAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCcac < 2:1877512/76‑1 (MQ=255) ttttAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGGTGGGCTcccc > 2:4385659/1‑74 (MQ=255) ttttAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGGGTTGGGGTCcac > 1:3368309/1‑76 (MQ=255) tttAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCcaca < 2:1975345/76‑1 (MQ=255) tttAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCcaca < 2:6236810/76‑1 (MQ=255) ttAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGGTGGGGTCCACaa > 1:1378507/1‑76 (MQ=255) tAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGaa > 2:4405436/1‑45 (MQ=255) tAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGGTGGGGTCCCCaaa > 1:556921/1‑76 (MQ=255) aaaGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGGTCCACaaaa > 2:4542512/1‑76 (MQ=255) aaaGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACaaaa < 1:1408499/76‑1 (MQ=255) aaaGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACaaaa < 1:524482/76‑1 (MQ=255) aaaGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGATGGGGTCCCCcaaa > 2:565974/1‑76 (MQ=255) agagCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGGGGTGGGCTCCACaaaaaa > 1:2307332/1‑74 (MQ=255) agCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATggg < 2:5350387/76‑1 (MQ=255) gCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATgggg < 1:4910825/76‑1 (MQ=255) cATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGG‑a < 2:1236563/76‑1 (MQ=255) cATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGATGGGGTTCTCACAATggggg > 2:3367895/1‑75 (MQ=255) aTAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGG‑Ac < 1:3257471/76‑1 (MQ=255) tAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGGTCCACCAAATAGGG‑ACa > 2:254213/1‑76 (MQ=255) aaaTTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGGTGGGGTGCACAAAAAAGGG‑ACAt > 1:2138673/1‑76 (MQ=255) aaTTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGG‑ACATc < 2:685274/76‑1 (MQ=255) aaTTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGG‑ACATc < 1:667445/76‑1 (MQ=255) aTTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGG‑ACATCa < 1:4808428/76‑1 (MQ=255) aTTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGATGGGCTCCACAAAAAGGGG‑acaaca > 2:3889959/1‑76 (MQ=255) ttCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGATGGGCTCCCCAAAAAGGGG‑ACATCaaa > 2:6177900/1‑76 (MQ=255) ttCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGGGGTGGGGTCCACCAAAAAGGG‑ACATCaaa > 1:5149791/1‑76 (MQ=255) tCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGG‑ACATCAAAg < 2:1908169/76‑1 (MQ=255) cAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGG‑ACATCAAAGa < 1:68464/76‑1 (MQ=255) cAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGGTGGGGGCCACAAAAACGGG‑ACGGCAAAGa > 1:1315827/1‑76 (MQ=255) ggCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGG‑ACATCAAAGaaa < 1:2983696/76‑1 (MQ=255) ggCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGG‑ACATCAAAGaaa < 1:5650468/76‑1 (MQ=255) gCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGG‑ACATCAAAGaaaa < 1:1535183/76‑1 (MQ=255) gCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGGAGGGGTTCCGAAAATGGGGAACAACAaaaaaa > 1:844315/1‑76 (MQ=255) gCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGGGGTGGGGTCCCCAAAAAGGGG‑AAATCaaaaaaaa > 1:4128724/1‑76 (MQ=255) | GCTGCCGCCATTTTGTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGG‑ACATCAAAGAAAAG > REL606/904607‑904757 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |