| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 1,812,834 | IS150 (+) +3 bp | coding (92‑94/549 nt) | ynjA → | hypothetical protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 664688 = | NA (NA) | 83 (1.330) | 51/150 | 0.1 | 100% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | REL606 | = 1812836 | 0 (0.000) | coding (94/549 nt) | ynjA | hypothetical protein | |||||
| * | ? | REL606 | 1812834 = | 0 (0.000) | 58 (0.960) | 46/146 | 0.2 | 100% | coding (92/549 nt) | ynjA | hypothetical protein |
| ? | REL606 | 2774435 = | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region | |||||
Only 100 of 142 total aligned reads displayed.
AGCAAAATTCCTTTAATTTTACGTCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGGATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGAGCGCAAACGCTCAC > REL606/1812761‑1812911 | tgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTc < 1:381089‑M1/3‑1 (MQ=255) gactccaattgaatatcggaatcagacgtatgtgnctcgagtntanctntccatcttcttggggtcagtacaTTCg < 1:1760410‑M1/4‑1 (MQ=255) gactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTCg < 2:1289486‑M1/4‑1 (MQ=255) gactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTCg > 1:148066‑M1/73‑76 (MQ=255) gCAAAATTCCTTTAATTTTACGTCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCt > 2:409403‑M2/1‑75 (MQ=255) gCAAAATTCCTTTAATTTTACGTCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCt > 2:353225‑M2/1‑75 (MQ=255) gCAAAATTCCTTTAATTTTACGTCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCt > 2:776051‑M2/1‑75 (MQ=255) actccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTCGc < 2:369067‑M1/5‑1 (MQ=255) ctccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTCGCt > 2:851116‑M1/71‑76 (MQ=255) aaaaTTCCTTTAATTTTACGTCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCtgt > 2:1087715‑M2/1‑73 (MQ=255) aaaaTTCCTTTAATTTTACGTCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGGGCTAAGCCCCCTTCtgt < 2:431158‑M2/76‑4 (MQ=255) attgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTCGCtggtgg < 1:1169305‑M1/11‑1 (MQ=255) ttgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTCGCTGGTggg > 2:1148321‑M1/65‑76 (MQ=255) tgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTCGCTGGTgggg > 2:631184‑M1/64‑76 (MQ=255) gaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTCGCTGGTggggg < 2:1046386‑M1/14‑1 (MQ=255) aatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTCGCTGGTGGGGGc > 2:738120‑M1/62‑76 (MQ=255) tAATTTTACGTCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCtgtactgcaccca > 2:659014‑M2/1‑63 (MQ=255) tatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTCGCTGGTGGGGGCgg > 1:962106‑M1/60‑76 (MQ=255) aaTTTTACGTCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCtgtactgcacccat > 2:467325‑M2/1‑62 (MQ=255) tttACGTCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCtgtactgcacccatttt > 2:1439281‑M2/1‑59 (MQ=255) cggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTCGCTGGTGGGGGCGGATc > 2:1198381‑M1/57‑76 (MQ=255) ttACGTCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCtgtactgcacccattttg > 2:507740‑M2/1‑58 (MQ=255) ggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTCGCTGGTGGGGGCGGATcc < 1:1816403‑M1/21‑1 (MQ=255) gaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTCGCTGGTGGGGGCGGATccc > 1:547321‑M1/55‑76 (MQ=255) cGTCCACAGGCGTGGCTGCATCGTCGCNATTACGGNNAGGTGATAAGCCCCCTTCtgaactgcacacagtttgttg < 1:2001674‑M2/76‑22 (MQ=255) gTCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCtgtactgcacccattttgttgg > 1:1555419‑M2/1‑54 (MQ=255) gTCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCtgtactgcacccattttgttgg > 2:915317‑M2/1‑54 (MQ=255) cagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTCGCTGGTGGGGGCGGATCCCGttt > 2:1079698‑M1/51‑76 (MQ=255) cagacctatatgcctcgtgtttaactgtccaaatttttggggtcagtacaTTCGCTGGTGGGGGCGGATCCCGttt < 2:1412956‑M1/26‑1 (MQ=255) gacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTCGCTGGTGGGGGCGGATCCCGtttat > 1:1248857‑M1/49‑76 (MQ=255) gacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTCGCTGGTGGGGGCGGATCCCGtttat < 2:1345062‑M1/28‑1 (MQ=255) cacaGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCtgtactgcacccattttgttggacg > 1:1282435‑M2/1‑51 (MQ=255) caGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTGAGCCCCATTCtgtactgcacccattttgttggacgat > 1:1716840‑M2/1‑49 (MQ=255) caGGCGTGGCTGCATCGTCGCCATTACGGCGAGGGGCTAAGCCCCATTCtgtactgcacccattttgttggacgat < 2:1559642‑M2/76‑28 (MQ=255) ctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTCGCTGGTGGGGGCGGATCCCGtttatctt < 1:124982‑M1/31‑1 (MQ=255) aGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCtgtactgcacccattttgttggacgatg < 1:809283‑M2/76‑29 (MQ=255) tatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTCGCTGGTGGGGGCGGATCCCGtttatcttt > 1:706466‑M1/45‑76 (MQ=255) atatgcctcgtgtttaactgtccaactttttggggtcagtacaTTCGCTGGTGGGGGCGGATCCCGtttatctttt < 2:642817‑M1/33‑1 (MQ=255) atatgcctcgtgtttaactgtccaactttttggggtcagcacaTTCGCTGGTGGGGGCGGATCCCGtttatctttt < 2:1357480‑M1/33‑1 (MQ=255) tatgcctcgtgtttaactgtccaactttttggggtcagtacaTTCGCTGGTGGGGGCGGATCCCgtttatcttttt < 1:473189‑M1/34‑2 (MQ=255) tatgcctcgtgtttaactgtccaactttttggggtcagtacaTTCGCTGGTGGGGGCGGATCCCGtttatctttta > 2:1198592‑M1/43‑76 (MQ=255) gTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCtgtactgcacccattttgttggacgatgaaat < 2:517251‑M2/76‑33 (MQ=255) gTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCtgtactgcacccattttgttggacgatgaaat < 1:1326282‑M2/76‑33 (MQ=255) atgcctcgtgtttaactgtccaactttttggggtcagtacaTTCGCTGGTGGGGGCGGATCCcgtttttctttttt < 1:904490‑M1/35‑3 (MQ=255) atgcctcgtgtttaactgtccaactttttggggtcagtacaTTCGCTGGTGGGGGCGGATCCcctttatttttttt < 1:887302‑M1/35‑3 (MQ=255) tGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCtgtactgcacccattttgttggacgatgaaatg < 2:1861840‑M2/76‑34 (MQ=255) tGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCtgtactgcacccattttgttggacgatgaaatggaat > 2:928442‑M2/1‑39 (MQ=255) tGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCtgtactgcacccattttgttggacgatgaaatggaat > 1:267726‑M2/1‑39 (MQ=255) gCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCtgtactgcacccattttgttggacgatgaaatggaata < 2:1838617‑M2/76‑39 (MQ=255) gCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCtgtactgcacccattttgttggacgatgaaatggaata < 2:1527551‑M2/76‑39 (MQ=255) gCATCGTCACCATTACGGCGAGGTGCTAAGCCCCATTCtgtactgcacccattttgttggacgatgaaatggaata < 2:1194026‑M2/76‑39 (MQ=255) gtgtttaactgtccaactttttggggtcagtacaTTCGCTGGTGGGGGCGGATCCCGTTTATCTTTTATCTGgtgt > 1:784354‑M1/35‑76 (MQ=255) cATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCtgtactgcacccattttgttggacgatgaaatggaatag > 1:592510‑M2/1‑37 (MQ=255) tgtttaactgtccaactttttggggtcagtacaTTCGCTGGTGGGGGCGGATCCCGTTTATCTTTTATCTGGTGTc < 1:439114‑M1/43‑1 (MQ=255) aTCGTCGCCATTACNGCGAGGTGCCAAGCCCCATTCtatactgcacccattttgttggacgatgaaatggaatagc < 1:5140‑M2/76‑41 (MQ=255) aTCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCtgtactgcacccattttgttggacgatgaaatggaatagc < 2:1379470‑M2/76‑41 (MQ=255) gtttggctgtccaactttttggggtcagtacaTTCGCTGGTGGGGGCGGATCCCGTTTATCTTTTATCTGGTGTCg < 1:1916620‑M1/44‑1 (MQ=255) tttaactgtccaactttttggggtcagtacaTTCGCTGGTGGGGGCGGATCCCGTTTATCTTTTATCTGGTGTCGa > 1:812510‑M1/32‑76 (MQ=255) cgtcgCCATTACGGCGAGGTGCTAAGCCCCATTCtgtactgcacccattttgttggacgatgaaatggaatagccc < 2:1924864‑M2/76‑43 (MQ=255) cgtcgCCATTACGGCGAGGTGCTAAGCCCCATTCtgtactgcacccattttgttagacgatgaaatggaatagccc < 1:1587571‑M2/76‑43 (MQ=255) cgtcaCCATTACGGCGAGGTGCTAAGCCCCATTCtgtactgcacccattttgttggacgatgaaatggaatagccc < 1:139175‑M2/76‑43 (MQ=255) ttaactgtccaactttttggggtcagtacaTTCGCTGGTGGGGGCGGATCCCGTTTATCTTTTATCTGGTGTCGAt > 1:909891‑M1/31‑76 (MQ=255) tcgCCATTACGGCGAGGTGCTAAGCCCCATTCtgtactgcacccattttgttggacgatgaaatggaatagcccct > 1:759717‑M2/1‑32 (MQ=255) tcgCCATTACGGCGAGGTGCTAAGCCCCATTCtgtactgcacccatgttgttggacgatgaaatggagnagcccct > 2:1641995‑M2/1‑32 (MQ=255) cgCCATTACGGCGAGGTGCTAAGCCCCATTCtgtactgcacccattttgttggacgatgaaatggaatagccccta < 2:694171‑M2/76‑46 (MQ=255) ctgtccaactttttggggtcagtacaTTCGCTGGTGGGGGCGGATCCCGTTTATCTTTTATCTGGTGTCGAtgttt < 2:1965245‑M1/50‑1 (MQ=255) cATTACGGCGAGGTGCTAAGCCCCATTCtgtactgcacccattttgttggacgatgaaatggaatagnccctaata > 1:1952482‑M2/1‑28 (MQ=255) gtccaactttttggggtcagtacaTTCGCTGGTGGGGGCGGATCCCGGTTGTCTTTTATCTGGTGTCGAtgtttgt < 1:315630‑M1/52‑1 (MQ=255) ttACGGCGAGGTGCTAAGCCCCATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatg < 2:1817311‑M2/76‑51 (MQ=255) tACGGCGAGGTGCTAAGCCCCATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgt < 2:583245‑M2/76‑52 (MQ=255) cGGCGAGGTGCTAAGCCCCATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtca < 2:1312884‑M2/76‑54 (MQ=255) cGGCGAGGTGCTAAGCCCCATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtca > 2:1872354‑M2/1‑23 (MQ=255) ggCGAGGTGCTAAGCCCCATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaa > 2:562888‑M2/1‑22 (MQ=255) ggCGAGGTGCTAAGCCCCATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaa > 2:906086‑M2/1‑22 (MQ=255) ggCGAGGTGCTAAGCCCCATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaa > 2:953192‑M2/1‑22 (MQ=255) ttttggggtcagtacaTTCGCTGGTGGGGGCGGATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTtggctggc < 1:1533437‑M1/60‑1 (MQ=255) tttggggtcagtacaTTCGCTGGTGGGGGCGGATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTggctggct > 2:1338596‑M1/16‑76 (MQ=255) gTGCTAAGCCCCATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaa > 1:1379471‑M2/1‑16 (MQ=255) ggggtcagtacaTTCGCTGGTGGGGGCGGATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGa > 2:1453440‑M1/13‑76 (MQ=255) gCTAAGCCCCATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaa > 1:439549‑M2/1‑14 (MQ=255) gCTAAGCCCCATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaa < 1:387811‑M2/76‑63 (MQ=255) cTAAGCCCCATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaat > 1:727842‑M2/1‑13 (MQ=255) tAAGCCCCATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaata > 1:1521991‑M2/1‑12 (MQ=255) tcagtacaTTCGCTGGTGGGGGCGGATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGAgcgc < 2:827447‑M1/68‑1 (MQ=255) aaGCCCCATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatac < 1:1149464‑M2/76‑66 (MQ=255) agtacaTTCGCTGGTGGGGGCGGATCCCGTTTATCTGTTATCTGGAGTCGATGTTTGTTTGCTGGCTGTAGCGCaa < 1:35911‑M1/70‑1 (MQ=255) acaTTCGCTGGTGGGGGCGGATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCCGGAGCGCACACg < 1:706759‑M1/73‑1 (MQ=255) aTTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttg > 1:1074488‑M2/1‑4 (MQ=255) aTTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttg > 1:1449703‑M2/1‑4 (MQ=255) aTTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttg < 1:920969‑M2/76‑73 (MQ=255) aTTCGCTGGTGGGGGCGGATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGAGCGCAAACGCt > 1:1295778‑M1/2‑76 (MQ=255) ttCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttga < 1:769352‑M2/76‑74 (MQ=255) ttCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttga < 1:868463‑M2/76‑74 (MQ=255) ttCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttga > 2:225822‑M2/1‑3 (MQ=255) tCtgtactgcacccattttgttggacgattaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaa < 2:440752‑M2/76‑75 (MQ=255) ctgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaa < 1:1597050‑M2/76‑76 (MQ=255) ctgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaa > 1:587636‑M2/1‑1 (MQ=255) ctgtactgcacccattttgttggacgatgaaatgaaatagcncctaatatgtcaaagccanaanacccttttgaaa < 1:1671531‑M2/76‑76 (MQ=255) ctgtactgcacccattgtgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaa > 2:798342‑M2/1‑1 (MQ=255) cGCTGGTGGGGGCGGATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGAGCGCAAACGCTCAc > 1:860769/1‑76 (MQ=255) | AGCAAAATTCCTTTAATTTTACGTCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGGATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGAGCGCAAACGCTCAC > REL606/1812761‑1812911 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |