| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 1,812,834 | IS150 (+) +3 bp | coding (92‑94/549 nt) | ynjA → | hypothetical protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 664688 = | NA (NA) | 83 (1.330) | 51/150 | 0.1 | 100% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | REL606 | = 1812836 | 0 (0.000) | coding (94/549 nt) | ynjA | hypothetical protein | |||||
| * | ? | REL606 | 1812834 = | 0 (0.000) | 58 (0.960) | 46/146 | 0.2 | 100% | coding (92/549 nt) | ynjA | hypothetical protein |
| ? | REL606 | 2774435 = | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region | |||||
TGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCC‑AAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCA > REL606/2774360‑2774507 | tGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGtt > 1:460620/1‑76 (MQ=255)tGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGtt < 2:952354/76‑1 (MQ=255)tGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGtt > 1:741679/1‑76 (MQ=255) gTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTg < 2:252406/76‑1 (MQ=255) gTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTg < 2:252384/76‑1 (MQ=255) cAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTa < 2:453754/76‑1 (MQ=255) aGCATGTCTTGCCTCCCTGCAAAGCAGANCCTAACATTCGAATTGTTTAGNTTAGAACGTAAGCCTCAGGTTGTAc > 1:289918/1‑76 (MQ=255) aGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTAc > 1:856849/1‑76 (MQ=255) cATGTCTTGCCTCCCTGCAAAGAAGAGACTAACAATCNAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTg > 1:1992959/1‑76 (MQ=255) aTGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGa > 1:1012003/1‑76 (MQ=255) cTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGAcccc > 2:916924/1‑76 (MQ=255) cTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGAcccc > 2:355073/1‑76 (MQ=255) cTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGAcccc > 1:1458692/1‑76 (MQ=255) tGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCC‑aa > 1:208286/1‑76 (MQ=255) tCCCTTCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCC‑AAAAAg > 1:266270/1‑76 (MQ=255) tCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCC‑AAAAAg > 1:1859159/1‑76 (MQ=255) cccTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCC‑AAAAAGt > 1:1533641/1‑76 (MQ=255) tGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCC‑AAAAAGTTgg < 2:265152/76‑1 (MQ=255) tGCAAAGAAGAGACAAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCA‑AAAAAGTTgg < 1:160218/76‑1 (MQ=255) aaaGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCC‑AAAAAGTTGGACa > 1:959211/1‑76 (MQ=255) aaaGAAGAGACTAACATGCGAGTTGTTTCGGTTCGGACGTAAGACTCAGGTTGTACTGACTCG‑ACAGAGTTGGACa > 1:2036925/1‑76 (MQ=255) agaagaGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCC‑AAAAAGTTGGACAGt < 2:417195/76‑1 (MQ=255) agaagaGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCC‑AAAAAGTTGGACAGt > 2:607211/1‑76 (MQ=255) aagaGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAAGTTGGACAGtt > 2:1940163/1‑76 (MQ=255) agagACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCC‑AAAAAGTTGGACAGTTaa > 2:527627/1‑76 (MQ=255) agagACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCC‑AAAAAGATGGACAGTTaa > 2:577776/1‑76 (MQ=255) agaCTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCC‑AAAAAGTTGGACAGTTAAac < 2:1352628/76‑1 (MQ=255) agaCTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCC‑AAAAAGTTGGACAGTTAAac < 1:883140/76‑1 (MQ=255) agaCTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCC‑AAAAAGTTGGACAGTTAAac < 1:874198/76‑1 (MQ=255) aCTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCC‑AAAAAGTTGGACAGTTAAacac < 1:1939456/76‑1 (MQ=255) tAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCC‑AAAAAGTTGGACAGTTAAACACGa > 2:1008376/1‑76 (MQ=255) aaCATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCC‑AAAAAGTTGGACAGTTAAACACGAg > 2:903619/1‑76 (MQ=255) ttCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCC‑AAAAAGTTGGACAGTTAAACACGAGGCat < 1:434164/76‑1 (MQ=255) tCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCC‑AAAAAGTTGGACAGTTAAACACGAGGCata > 2:1749908/1‑76 (MQ=255) cGAGTTGTTTGAGTTCGAACGTAAGCCTCAGGTTGTACTGACCCC‑AAAAAGTTGGACAGTTAAACACGAGGCatat > 1:1867559/1‑76 (MQ=255) cGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCC‑AAAAAGTTGGACAGTTAAACACGAGGCatat < 1:1732641/76‑1 (MQ=255) gAATTGTTTGGGTTCGAACGTAAGCATCTGGTTGTACTGACCCC‑AAAAAGTTGGACAGTTAAACACGAGGCAtata < 1:307043/76‑1 (MQ=255) aaTTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCC‑AAAAAGTTGGACAGTTAAACACGAGGCATATAg > 2:1399302/1‑76 (MQ=255) ttGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCC‑AAAAAGTTGGACAGTTAAACACGAGGCATATAGGt < 2:96169/76‑1 (MQ=255) tGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCC‑AAAAAGTTGGACAGTTAAACACGAGGCATATAGGTc < 2:1258231/76‑1 (MQ=255) gTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCN‑AATAAGTTGGACAGTTAAACACGAGGCATATAGGTCt < 1:1992544/76‑1 (MQ=255) tttGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCC‑AAAAAGTTGGACAGTTAATCACGAGGCATATAGGTCTg < 1:1736013/76‑1 (MQ=255) tttGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCC‑AAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTg > 2:1464866/1‑76 (MQ=255) tttGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCC‑AAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTg < 1:1314582/76‑1 (MQ=255) tGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCC‑AAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGAt > 2:930890/1‑76 (MQ=255) tGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCC‑AAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGAt > 2:1007670/1‑76 (MQ=255) gggTTCGAACGTAAGCCTCAGGTTACACNCACCCC‑AACATGTTGGACAATNAATCACGAGGCATATAGGTCTGAtt > 1:286578/1‑76 (MQ=18) ggTTCGAACGTAAGCCTCAGGTTGTACTGACCCC‑AAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTc < 2:1598919/76‑1 (MQ=255) gTTCGAACGTAAGCCTCAGGTTGTACTGACCCC‑AAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTcc < 1:1081273/76‑1 (MQ=255) tCGAACGTAAGCCTCAGGTTGTACTGACCCC‑AAAAAGTTGGACAGTTAAACACGAGGCATATAGGTGTGATTCCGa > 2:125311/1‑76 (MQ=255) cGAACGTAAGCCTCAGGTTGTACTGACCCC‑AAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTAATTCCGat > 1:1366171/1‑76 (MQ=255) cGAACGTAAGCCTCAGGTCGTNCTNACCCC‑AAAAAGTTGGACAGTTNAACACGANGNATATAGGTCTGATTCCGat > 2:285488/1‑76 (MQ=17) aaCGTAAGCCTCAGGTTGTACTGACCCC‑AAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGntat < 1:1826577/76‑1 (MQ=255) aaCGTAAGCCTCAGGTTGTACTGACCCC‑AAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGatat < 1:878264/76‑1 (MQ=255) gTAAGCGTCAGGTTGTTCTGACCCC‑AAAAAGTTGGACAGCTAAACACGAGGCATATAGGTCTGATTCCGATATTCa < 1:35830/76‑1 (MQ=14) gTAAGCCTCAGGTTGTACTGACCCC‑AAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCa < 1:1631166/76‑1 (MQ=255) aGCCTCAGGTTGTACTGACCCC‑AAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAAtt > 2:1942705/1‑76 (MQ=39) gCCTCAGGTTGTACTGACCCC‑AAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTg < 1:489018/76‑1 (MQ=39) ccTCAGGTTGTACTNACCCC‑AAAAAGTTGGACAGTTAAACACCAGGCATATAGGTCTGATCCCTATATTCAATTgg < 1:1752997/76‑1 (MQ=14) ccTCAGGTTGTACTGACCCC‑AAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTgg < 2:1310634/76‑1 (MQ=39) cTCAGGTTGTACTGACCCC‑AAAAAGTTGGACAGTTAAACATACGGCATATAAGTCTGATTCCGATATNCAATTGGa > 2:337377/1‑76 (MQ=11) cTCAGGTTGTACTGACCCC‑AAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGa > 1:1104746/1‑76 (MQ=38) tCAGGTTGTACTGACCCC‑AAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAg > 2:1744207/1‑76 (MQ=35) aGGTTGTACTGACCCC‑AAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTc > 1:1131944/1‑76 (MQ=34) ggTTGTACTGACCCC‑AAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCa < 1:1008377/76‑1 (MQ=32) | TGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCC‑AAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCA > REL606/2774360‑2774507 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |