| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 4384397 | 325 (1.320) | 235 (0.960) | 99/148 | 0.5 | 42.0% | coding (53/426 nt) | yjeB | predicted DNA‑binding transcriptional regulator |
| ? | REL606 | 4505342 = | NA (NA) | noncoding (768/768 nt) | IS1 | repeat region | |||||
Only 100 of 570 total aligned reads displayed.
CCGATTTCCCTTTTGAGGTTGATGTGCAGTTAACGAGTTTCACTGATTACGGATTACGTGCGCTGATCTACATGGCGTCATTGCCAGAAGGGCGGATGACCAGTATTTCTGAAGTGACTGACGTCTACGGCGTCTCCCGTAATCATATGGT > REL606/4384322‑4384472 | ccGATTTCCCTTTTGAGGTTGATGTGCAGTTAACGAGTTTCACTGATTACGGATTACGTGCGCTGATCTACATGGc < 2:7217973/76‑1 (MQ=255) cGATTTCCCTTTTGAGGTTGATGTGCAGTTAACGAGTTTCACTGATTACGGATTACGTGCGCTGATCTACATGGCg < 1:4666083‑M1/76‑2 (MQ=255) cGATTTCCCTTTTGAGGTTGATGTGCAGTTAACGAGTTTCACTGATTACGGATTACGTGCGCTGATCTACATGGCg > 1:3318211‑M1/1‑75 (MQ=255) gATTTCCCTTTTGAGGTTGATGTGCAGTTAACGAGTTTCACTGATTACGGATTACGTGCGCTGATCTACATGGCGt < 1:997026/76‑1 (MQ=255) aTTTCCCTTTTGAGGTTGATGTGCAGTTAACGAGTTTCACTGATTACGGATTACGTGCGCTGATCTACATGGCggt > 2:6385712‑M1/1‑73 (MQ=255) ttCCCTTTTGAGGTTGATGTGCAGTTAACGAGTTTCACTGATTACGGATTACGTGCGCTGATCTACATGGCGTCAt < 1:5701543/76‑1 (MQ=255) cccTTTTGAGGTTGATGTGCAGTTAACGAGTTTCACTGATTACGGATTACGTGCGCTGATCTACATGGCGTCATTg > 1:4415897/1‑76 (MQ=255) cccTTTTGAGGTTGATGTGCAGTTAACGAGTTTCACTGATTACGGATTACGTGCGCTGATCTACATGGCGTCATTg > 2:7832022/1‑76 (MQ=255) ttttGAGGTTGATGTGCAGTTAACGAGTTTCACTGATTACGGATTACGTGCGCTGATCTACATGGCggtaatgact < 2:2136128‑M1/76‑11 (MQ=255) ttttGAGGTTGATGTGCAGTTAACGAGTTTCACTGATTACGGATTACGTGCGCTGATCTACATGGCGTCATTGCCa < 1:6270583/76‑1 (MQ=255) ttttGAGGTTGATGTGCAGTTAACGAGTTTCACTGATTACGGATTACGTGCGCTGATCTACATGGCGTCATTGCCa > 1:3831426/1‑76 (MQ=255) tttGAGGTTGATGTGCAGTTAACGAGTTTCACTGATTACGGATTACGTGCGCTGATCTACATGGCggtaatgactc > 1:8106780‑M1/1‑65 (MQ=255) tttGAGGTTGATGTGCAGTTAACGAGTTTCACTGATTACGGATTACGTGCGCTGATCTACATGGCGTCATTGCCAg > 1:1523725/1‑76 (MQ=255) tttGAGGTTGATGTGCAGTTAACGAGTTTCACTGATTACGGATTACGTGCGCTGATCTACATGGCGTCATTGCCAg > 1:2648553/1‑76 (MQ=255) ttGAGGTTGATGTGCAGTTAACGAGTTTCACTGATTACGGATTACGTGCGCTGATCTACATGGCggtaatgactcc < 2:5264095‑M1/76‑13 (MQ=255) ttGAGGTTGATGTGCAGTTAACGAGTTTCACTGATTACGGATTACGTGCGCTGATCTACATGGCGTCATTGCCAGa > 2:5719332/1‑76 (MQ=255) gAGGTTGATGTGCAGTTAACGAGTTTCACTGATTACGGATTACGTGCGCTGATCTACATGGCggtaatgactccaa < 2:4761425‑M1/76‑15 (MQ=255) gAGGTTGATGTGCAGTTAACGAGTTTCACTGATTACGGATTACGTGCGCTGATCTACATGGCggtaatgactccaa > 2:7440602‑M1/1‑62 (MQ=255) gAGGTTGATGTGCAGTTAACGAGTTTCACTGATTACGGATTACGTGCGCTGATCTACATGGCggtaatgactccaa < 2:7524230‑M1/76‑15 (MQ=255) aGGTTGATGTGCAGTTAACGAGTTTCACTGATTACGGATTACGTGCGCTGATCTACATGGCggtaatgactccaac < 1:8186545‑M1/76‑16 (MQ=255) aGGTTGATGTGCAGTTAACGAGTTTCACTGATTACGGATTACGTGCGCTGATCTACATGGCGTCATTGCCAGAAgg > 1:2524690/1‑76 (MQ=255) ggTTGATGTGCAGTTAACGAGTTTCACTGATTACGGATTACGTGCGCTGATCTACATGGCggtaatgactccaact < 2:3114146‑M1/76‑17 (MQ=255) ttGATGTGCAGTTAACGAGTTTCACTGATTACGGATTACGTGCGCTGATCTACATGGCGTCATTGCCAGAAGGGCg > 2:4556082/1‑76 (MQ=255) tGATGTGCAGTTAACGAGTTTCACTGATTACGGATTACGTGCGCTGATCTACATGGCggtaatgactccaacttat < 1:1013526‑M1/76‑20 (MQ=255) tGATGTGCAGTTAACGAGTTTCACTGATTACGGATTACGTGCGCTGATCTACATGGCggtaatgactccaacttat < 2:2458183‑M1/76‑20 (MQ=255) gATGTGCAGTTAACGAGTTTCACTGATTACGGATTACGTGCGCTGATCTACATGGCGTCATTGCCAGAAGGGCGGa > 1:4776650/1‑76 (MQ=255) aTGTGCAGTTAACGAGTTTCACTGATTACGGATTACGTGCGCTGATCTACATGGCggtaatgactcccacttattg > 2:2565491‑M1/1‑55 (MQ=255) aTGTGCAGTTAACGAGTTTCACTGATTACGGATTACGTGCGCTGATCTACATGGCggtaatgactccaacttattg < 1:8221666‑M1/76‑22 (MQ=255) aTGTGCAGTTAACGAGTTTCACTGATTACGGATTACGTGCGCTGATCTACATGGCggtaatgactccaacttattg < 2:2742524‑M1/76‑22 (MQ=255) gtgCAGTTAACGAGTTTCACTGATTACGGATTACGTGCGCTGATCTACATGGCGTCATTGCCAGAAGGGCGGATGa < 1:5471796/76‑1 (MQ=255) gCAGTTAACGACTTTCACCGGTTCCGGATTACGTGCGCTGATCTACATGGCGACGTTGCCAGAAGGGCGGAGGAcc < 2:3451677/76‑1 (MQ=255) cAGTTAACGAGTTTCACTGATTACGGATTACGTGCGCTGATCTACATGGCggtaatgactccaacttattgatagt > 1:2135153‑M1/1‑50 (MQ=255) aGTTAACGAGTTTCACTGATTACGGATTACGTGCGCTGATCTACATGGCGTCATTGCCAGAAGGGCGGATGACCAg > 2:88044/1‑76 (MQ=255) gTTAACGAGTTTCACTGATTACGGATTACGTGCGCTGATCTACATGGCGTCATTGCCAGAAGGGCGGATGACCAGt > 1:4873849/1‑76 (MQ=255) gTTAACGAGTTTCACTGATTACGGATTACGTGCGCTGATCTACATGGCGTCATTGCCAGAAGGGCGGATGACCAGt > 1:6698898/1‑76 (MQ=255) ttAACGAGTTTCACTGATTACGGATTACGTGCGCTGATCTACATGGCGTCATTGCCAGAAGGGCGGATGACCAGTa > 1:7007312/1‑76 (MQ=255) tAACGAGTTTCACTGATTACGGATTACGTGCGCTGATCTACATGGCggtaatgactccaacttattgatagtgttt < 1:4371120‑M1/76‑31 (MQ=255) aaCGAGTTTCACTGATTACGGATTACGTGCGCTGATCTACATGGCGTCATTGCCAGAAGGGCGGACGACCAGTAtt > 1:1625041/1‑76 (MQ=255) aCGAGTTTCACTGATTACGGATTACGTGCGCTGATCTACATGGCGTCATTGCCAGAAGGGCGGATGACCAGTAttt < 2:2388629/76‑1 (MQ=255) cGAGTTTCACTGATTACGGATTACGTGCGCTGATCTACATGGCGTCATTGCCAGAAGGGCGGATGACCAGTATTTc > 1:5794600/1‑76 (MQ=255) cGAGTTTCACTGATTACGGATTACGTGCGCTGATCTACATGGCGTCATTGCCAGAAGGGCGGATGACCAGTATTTc > 2:6935250/1‑76 (MQ=255) gTTTCACTGATTACGGATTACGTGCGCTGATCTACATGGCggtaatgactccaacttattgatagtgttttatgtt < 2:7718893‑M1/76‑37 (MQ=255) gTTTCACTGATTACGGATTACGTGCGCTGATCTACATGGCGTCATTGCCAGAAGGGCGGATGACCAGTATTTCTGa > 2:1788419/1‑76 (MQ=255) tttCACTGATTACGGATTACGTGCGCTGATCTACATGGCGTCATTGCCAGAAGGGCGGATGACCAGTATTTCTGaa < 1:2581377/76‑1 (MQ=255) tttCACTGATTACGGATTACGTGCGCTGATCTACATGGCGTCATTGCCAGAAGGACGGATGACCAGTATTTCTGaa > 1:1352541/1‑76 (MQ=255) ttCACTGATTACGGATTACGTGCGCTGATCTACATGGCggtaatgactccaacttattgatagtgttttatgttca < 1:5948148‑M1/76‑39 (MQ=255) ttCACTGATTACGGATTACGTGCGCTGATCTACATGGCggtaatgactccaacttattgatagtgttttatgttca < 2:7123705‑M1/76‑39 (MQ=255) ttCACTGATTACGGATTACGTGCGCTGATCTACATGGCGTCATTGCCAGAAGGGCGGATGACCAGTATTTCTGAAg > 1:86556/1‑76 (MQ=255) tCACTGATTACGGATTACGTGCGCTGATCTACATGGCGTCATTGCCAGAAGGGCGGATGACCAGTATTTCTGAAGt > 1:1978926/1‑76 (MQ=255) aCTGATTACGGATTACGTGCGCTGATCTACATGGCggtaatgactccaacttattgatagtgttttatgttcagat > 1:3099458‑M1/1‑35 (MQ=255) aCTGATTACGGATTACGTGCGCTGATCTACATGGCGTCATTGCCAGAAGGGCGGATGACCAGTATTTCTGAAGtga < 1:6403251/76‑1 (MQ=255) tGATTACGGATTACGTGCGCTGATCTACATGGCggtaatgactccaacttattgatagtgttttatgttcagataa > 2:4019870‑M1/1‑33 (MQ=255) tGATTACGGATTACGTGCGCTGATCTACATGGCGTCATTGCCAGAAGGGCGGATGACCAGTATTTCTGAAGtgact > 2:5027272/1‑76 (MQ=255) gattacggattacgTGCGCTGATCTACATGGCggtaatgactccaacttattgatagtgttttatgttcagataat < 1:1113152‑M1/76‑45 (MQ=255) gattacggattacgTGCGCTGATCTACATGGCGTCATTGCCAGAAGGGCGGATGACCAGTATTTCTGAAGtgactg > 1:5379309/1‑76 (MQ=255) gattacggattacgTGCGCTGATCTACATGGCGTCATTGCCAGAAGGGCGGATGACCAGTATTTCTGAAGtgactg < 1:7583614/76‑1 (MQ=255) ttacggattacgTGCGCTGATCTACATGGCGTCATTGCCAGAAGGGCGGATGACCAGTATTTCTGAAGtgactgac < 1:4319679/76‑1 (MQ=255) acggattacgTGCGCTGATCTACATGGCggtaatgactccaacttattgatagtgttttatgttcagataatgccc < 2:4245381‑M1/76‑49 (MQ=255) attacgTGCGCTGATCTACATGGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatg > 1:6593806‑M1/1‑24 (MQ=255) attacgTGCGCTGATCTACATGGCGTCATTGCCAGAAGGGCGGATGACCAGTATTTCTGAAGTGACTGACGTCTAc < 1:6147841/76‑1 (MQ=255) ttacgTGCGCTGATCTACATGGCGTCATTGCCAGAAGGGCGGATGACCAGTATTTCTGAAGTGACTGACGTCTACg < 1:4188837/76‑1 (MQ=255) tacgTGCGCTGATCTACATGGCGTCATTGCCAGAAGGGCGGATGACCAGt < 2:5547863/50‑1 (MQ=255) acgTGCGCTGATCTACATGGCGTCATTGCCAGAAGGGCGGATGACCAGTATTTCTGAAGTGACTGACGTCTACGGc < 1:1231305/76‑1 (MQ=255) cgTGCGCTGATCTACATGGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactt > 2:3648506‑M1/1‑20 (MQ=255) gTGCGCTGATCTACATGGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgacttt < 1:590446‑M1/76‑58 (MQ=255) gTGCGCTGATCTACATGGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgacttt < 1:5030252‑M1/76‑58 (MQ=255) gTGCGCTGATCTACATGGCGTCATTGCCAGAAGGGCGGATGACCAGTATTTCTGAAGTGACTGACGTCTACGGCGt > 2:6119122/1‑76 (MQ=255) gTGCGCTGATCTACATGGCGTCATTGCCAGAAGGGCGGATGACCAGTATTTCTGAAGTGACTGACGTCTACGGCGt > 1:7686375/1‑76 (MQ=255) cgcTGATCTACATGGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtc < 1:7924974‑M1/76‑61 (MQ=255) cgcTGATCTACATGGCGTCATTGCCAGAAGGGCGGATGACCAGTATTTCTGAAGTGACTGACGTCTACGGCGtctc > 1:2972554/1‑76 (MQ=255) gcTGATCTACATGGCGTCATTGCCAGAAGGGCGGATGACCAGTATTTCTGAAGTGACTGACGTCTACGGCGTCTcc > 2:5931012/1‑76 (MQ=255) cTGATCTACATGGCGTCATTGCCAGAAGGGCGGATGACCAGTATTTCTGAAGTGACTGACGTCTACGGCGTCTccc < 1:7480693/76‑1 (MQ=255) gATCTACATGGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgc < 2:2933220‑M1/76‑65 (MQ=255) gATCTACATGGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttatcatgc < 2:6278715‑M1/76‑65 (MQ=255) gATCTACATGGCggtaatgactccaacttattgatagggttttatgttcagataatgcccgatgactttgtcatgc > 2:223201‑M1/1‑12 (MQ=255) aTCTACATGGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgca > 2:6732604‑M1/1‑11 (MQ=255) aTCTACATGGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgca > 2:2863941‑M1/1‑11 (MQ=255) aTCTACATGGCGTCATTTCCAGAAGGGCGGATGACCAGTATTTCTGAAGTGACTGACGTCTACGGCGTCTCCCGTa < 2:1570670/76‑1 (MQ=255) aTCTACATGGCGTCATTGCCAGAAGGGCGGATGACCAGTATTTCTGAAGTGACTGGCGTCTACGGCGTCTCCCGTa > 2:8198137/1‑76 (MQ=255) aTCTACATGGCGTCATTGCCAGAAGGGCGGATGACCAGTATTTCTGAAGTGACTGACGTCTACGGCGTCTCCCGTa < 2:1970020/76‑1 (MQ=255) aTCTACATGGCGTCATTGCCAGAAGGGCGGATGACCAGTATTTCTGAAGTGACTGACGTCTACGGCGTCTCCCGTa < 1:1836670/76‑1 (MQ=255) aTCTACATGGCGTCATTGCCAGAAGGGCGGATGACCAGTATTTCTGAAGTGACTGACGTCTACGGCGTCTCCCGTa > 2:6568174/1‑76 (MQ=255) tACATGGCGTCATTGCCAGAAGGGCGGATGACCAGTATTTCTGAAGTGACTGACGTCTACGGCGTCTCCCGTAATc < 1:7356482/76‑1 (MQ=255) tACATGGCGTCATTGCCAGAAGGGCGGATGACCAGTATTTCTGAAGTGACTGACGTCTACGGCGTCTCCCGTAATc > 1:2475025/1‑76 (MQ=255) aCATGGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctc > 2:3816171‑M1/1‑7 (MQ=255) cATGGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctcc < 2:3239040‑M1/76‑71 (MQ=255) cATGGCGTCATTGCCAGAAGGGCGGATGACCAGTATTTCTGAAGTGACTGACGTCTACGGCGTCTCCCGTAATCat < 2:7969706/76‑1 (MQ=255) aTGGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccc > 2:1426823‑M1/1‑5 (MQ=255) aTGGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctcca < 2:5861172‑M1/76‑72 (MQ=255) aTGGCGTCATTGCCAGAAGGGCGGATGACCAGTATTTCTGAAGTGACTGACGTCTACGGCGTCTCCCGTAATCata > 1:5221680/1‑76 (MQ=255) aTGGCGTCATTGCCAGAAGGGCGGATGACCAGTATTTCTGAAGTGACTGACGTCTACGGCGTCTCCCGTAATCata < 2:4416619/76‑1 (MQ=255) aTGGCGTCATTGCCAGAAGGGCGGATGACCAGTATTTCTGAAGTGACTGACGTCTACGGCGTCTCCCGTAATCata > 1:3547206/1‑76 (MQ=255) tGGCGTCATTGCCAGAAGGGCGGATGACCAGTATTTCTGAAGTGACTGACGTCTACGGCGTCTCCCGTAATCatat < 1:5118905/76‑1 (MQ=255) ggCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccacc < 1:6932196‑M1/76‑74 (MQ=255) ggCGTCATTGCCAGAAGGGCGGATGACCAGTATTTCTGAAGTGACTGACGTCTACGGCGTCTCCCGTAATCATATg < 2:7599763/76‑1 (MQ=255) ggCGTCATTGCCAGAAGGGCGGATGACCAGTATTTCTGAAGTGACTGACGTCTACGGCGTCTCCCGTAATCATATg < 1:3741739/76‑1 (MQ=255) gCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccg < 2:1133888‑M1/76‑75 (MQ=255) gCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccg < 1:7225798‑M1/76‑75 (MQ=255) cggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccga > 1:3965724‑M1/1‑1 (MQ=255) cggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccga > 1:6786844‑M1/1‑1 (MQ=255) | CCGATTTCCCTTTTGAGGTTGATGTGCAGTTAACGAGTTTCACTGATTACGGATTACGTGCGCTGATCTACATGGCGTCATTGCCAGAAGGGCGGATGACCAGTATTTCTGAAGTGACTGACGTCTACGGCGTCTCCCGTAATCATATGGT > REL606/4384322‑4384472 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |