| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | REL606 | 2,298,770 | (ATCACTGC)1→2 | coding (313/1359 nt) | glpT ← | sn‑glycerol‑3‑phosphate transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 2298762 = | 24 (0.100) | 184 (0.800) | 94/148 | 0.5 | 91.4% | coding (321/1359 nt) | glpT | sn‑glycerol‑3‑phosphate transporter |
| ? | REL606 | = 2298769 | 11 (0.050) | coding (314/1359 nt) | glpT | sn‑glycerol‑3‑phosphate transporter | |||||
Only 100 of 383 total aligned reads displayed.
CCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATG > REL606/2298687‑2298837 | agaggaacaacagtacaaacatcaccgcaatgctcgacgtcgcccatggcacaaagcccataaacaacatcactgc < 1:4613118‑M1/1‑1 (MQ=255)agaggaacaacagtacaaacatcaccgcaatgctcgacgtcgcccatggcacaaagcccataaacaacatcactgc < 1:4213817‑M1/1‑1 (MQ=255) caaccGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAacaaca > 2:3099824/1‑76 (MQ=255) aggaacaacagtacaaacatcaccgcaatgctcgacgtcgcccatggcacaaagcccataaacaacatcactgcat > 2:5951846‑M1/74‑76 (MQ=255) aggaacaacagtacaaacatcaccgcaatgctcgacgtcgcccatggcacaaagcccataaacaacatcactgcat > 1:6491644‑M1/74‑76 (MQ=255) aaccGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACAt < 1:3423647/76‑1 (MQ=255) ggaacaacagtacaaacatcaccgcaatgctcgacgtcgcccatggcacaaagcccataaacaacatcactgcatc > 2:1429029‑M1/73‑76 (MQ=255) ccGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCa < 2:7374131/76‑1 (MQ=255) ccGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCa < 2:664043/76‑1 (MQ=255) gCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACt > 2:5607532/1‑76 (MQ=255) acaacagtacaaacatcaccgcaatgctcgacgtcgcccatggcacaaagcccataaacaacatcactgcatcact < 2:578392‑M1/7‑1 (MQ=255) agagGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGc < 1:2460681‑M2/76‑2 (MQ=255) gagGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGca > 2:4011098‑M2/1‑74 (MQ=255) gagGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGca < 2:6073853‑M2/76‑3 (MQ=255) gagGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGca > 1:59947‑M2/1‑74 (MQ=255) acagtacaaacatcaccgcaatgctcgacgtcgcccatggcacaaagcccataaacaacatcactgCATCACTgcc < 1:21071‑M1/10‑1 (MQ=255) ggAACAACAGTACAAACATCCCCGAAAAGCACGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatc > 1:884051‑M2/1‑72 (MQ=255) gtacaaacatcaccgcaatgctcgacgtcgcccatggcacaaagcccataaacaacatcactgCATCACTgccgcc < 2:6839591‑M1/13‑1 (MQ=255) gAACAACAGGACAAACATCACCGCAATGCGCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatca > 2:3199655‑M2/1‑71 (MQ=255) tacaaacatcaccgcaatgctcgacgtcgcccatggcacaaagcccataaacaacatcactgCATCACTgccgccg < 1:7654503‑M1/14‑1 (MQ=255) aacaacAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcac > 1:5886997‑M2/1‑70 (MQ=255) acaacaGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcact < 2:6180809‑M2/76‑8 (MQ=255) acaaacatcaccgcaatgctcgacgtcgcccatggcacaaagcccataaacaacatcactgCATCACTgccgccgc < 1:296622‑M1/15‑1 (MQ=255) acaaacatcaccgcaatgctcgacgtcgcccatggcacaaagcccataaacaacatcactgCATCACTgccgccgc < 1:4222735‑M1/15‑1 (MQ=255) acaaacatcaccgcaatgctcgacgtcgcccatggcacaaagcccataaacaacatcactgCATCACTgccgccgc < 1:5273980‑M1/15‑1 (MQ=255) aacaGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGAACAAAGCCCATAAACAACATCACTGcatcactgc < 1:7418117‑M2/76‑10 (MQ=255) acatcaccgcaatgctcgacgtcgcccatggcacaaagcccataaacaacatcactgCATCACTGCCGCCGCCAGa > 1:688097‑M1/58‑76 (MQ=255) aGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgc < 2:7506463‑M2/76‑13 (MQ=255) tACAAACATCCCCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccg > 1:4828235‑M2/1‑62 (MQ=255) tACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccg > 1:3765520‑M2/1‑62 (MQ=255) caccgcaatgctcgacgtcgcccatggcacaaagcccataaacaacatcactgCATCACTGCCGCCGCCAGAATCa < 1:6115778‑M1/23‑1 (MQ=255) aCAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgc < 1:1100744‑M2/76‑16 (MQ=255) aCAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgc < 2:6859696‑M2/76‑16 (MQ=255) cAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgcc < 1:226851‑M2/76‑17 (MQ=255) cAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgcc > 1:6124660‑M2/1‑60 (MQ=255) aaCATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgccag > 2:3691359‑M2/1‑58 (MQ=255) aTCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgccagaat > 1:634186‑M2/1‑55 (MQ=255) tCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgccagaatc > 1:5095748‑M2/1‑54 (MQ=255) gctcgacgtcgcccatggcacaaagcccataaacaacatcactgCATCACTGCCGCCGCCAGAATCAAACCTGCgg < 2:2298127‑M1/32‑1 (MQ=255) cccgccgtcgcccatggcacaaagcccataaacaacatcactgCATCACTGCCGCCGCCAGAATCAAACCTGCggg > 2:7095965‑M1/44‑76 (MQ=255) ccGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgccagaatcaaa < 1:1217975‑M2/76‑26 (MQ=255) ccGCAAGCCCCGACGTGGCCCATGGCACAAAGCCCATAAACAACATCACTGcacccctgccgccgccagaatcaaa > 2:4485956‑M2/1‑51 (MQ=255) cAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgccagaatcaaacct < 2:4352279‑M2/76‑29 (MQ=255) cAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgccagaatcaaacct > 1:2417717‑M2/1‑48 (MQ=255) cAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgccagaatcaaacct < 2:4509506‑M2/76‑29 (MQ=255) cAATGCGCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgccagaatcaaacct > 2:4832122‑M2/1‑48 (MQ=255) aaTGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgccagaatcaaacctg < 1:357743‑M2/76‑30 (MQ=255) aaTGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgccagaatcaaacctg < 1:667261‑M2/76‑30 (MQ=255) tGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgccagaatcaaacctgcg < 1:3278886‑M2/76‑32 (MQ=255) gtcgcccatggcacaaagcccataaacaacatcactgCATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGaa > 1:4114259‑M1/38‑76 (MQ=255) gtcgcccatggcacaaagcccataaacaacatcactgCATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGaa < 1:1607186‑M1/39‑1 (MQ=255) ggcTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgccagaatcaaacctgcg > 2:3587233‑M2/2‑45 (MQ=255) gCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgccagaatcaaacctgcgg > 1:4384703‑M2/1‑44 (MQ=255) ccgcccatggcacaaagcccataaacaacatcactgCATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGaaa > 2:856016‑M1/37‑76 (MQ=255) cgcccatggcacaaagcccataaacaacatcactgCATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGaaaa > 1:5332677‑M1/36‑76 (MQ=255) cccatggcacaaagcccataaacaacatcactgCATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAAcg < 2:1967913‑M1/43‑1 (MQ=255) cGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgccagaatcaaacctgcgggca < 2:4858178‑M2/76‑36 (MQ=255) cGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgccagaatcaaacctgcgggca < 2:2885823‑M2/76‑36 (MQ=255) cGACGGCCCCCAGGGCAAAAAGCCCATAAACAACATCCCTGcaccactgccgccgccagaatcaaacctgcgggca > 2:2209402‑M2/1‑41 (MQ=255) gACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgccagaatcaaacctgcgggcag > 1:4498406‑M2/1‑40 (MQ=255) aCGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgccagcatcaaacctgcgggcagg < 1:7147419‑M2/76‑38 (MQ=255) tggcacaaagcccataaacaacatcactgCATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAAcgcgcg < 2:3370971‑M1/47‑1 (MQ=255) gTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgccagaatcaaacctgcgggcaggaa > 2:1041756‑M2/1‑37 (MQ=255) cGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgccagaatcaaacctgcgggcaggaaaa < 1:5075105‑M2/76‑42 (MQ=255) cGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgccagaatcaaacctgcgggcaggaaaa < 1:3484581‑M2/76‑42 (MQ=255) cccATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgccagaatcaaacctgcgggcaggaaaacg < 2:2629548‑M2/76‑44 (MQ=255) acaaagcccataaacaacatccctgCATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGAtt > 1:3817064‑M1/26‑76 (MQ=255) acaaagcccataaacaacatcactgCATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGAtt > 1:1718762‑M1/26‑76 (MQ=255) ccATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgccagaatcaaacctgcgggcaggaaaacgc < 2:5394040‑M2/76‑45 (MQ=255) ccATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgccagaatcaaacctgcgggcaggaaaacgc < 1:5709256‑M2/76‑45 (MQ=255) ccATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgccagaatcaaacctgcgggcaggaaaacgc < 2:1407491‑M2/76‑45 (MQ=255) aaagcccataaacaacatcactgCATCACTGCCGCCGCCAGAATCAAATCTGCGGGCAGGAAAACGCGCGGATTCg < 1:1031687‑M1/53‑1 (MQ=255) aTGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgccagaatcaaacctgcgggcaggaaaacgcgc < 1:7390150‑M2/76‑47 (MQ=255) ggCACAAAGCCCATAAACAACATCACTGcatcactgccgccgccagaatcaaacctgcgggcaggaaaacgcgcgg < 1:2797067‑M2/76‑49 (MQ=255) gcccataaacaacctcaccgCACCCCGGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGc > 1:2154761‑M1/21‑76 (MQ=255) ccataaacaacatcactgCATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGa < 2:3784487‑M1/58‑1 (MQ=255) cataaacaacatcactgCATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGTTTCGAGCGAt < 1:1831978‑M1/59‑1 (MQ=255) taaacaacatcactgCATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATcc < 2:2325794‑M1/61‑1 (MQ=255) aaaGCCCATAAACAACATCACTGcatcactgccgccgccagaatcaaacctgcgggcaggaaaacgggcggattcg < 1:5797871‑M2/76‑54 (MQ=255) aaaGCCCATAAACAACATCACTGcatcactgccgccgccagaatcaaacctgcgggcaggaaaacgcgcggattcg < 2:5516037‑M2/76‑54 (MQ=255) aaaGCCCATAAACAACATCACTGcatcactgccgccgccagaatcaaacctgcgggcaggaaaacgcgcggattcg < 2:1891021‑M2/76‑54 (MQ=255) aaacaacatcacggCATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCg > 1:2841015‑M1/15‑76 (MQ=255) aaacaacacccctgCATCCCTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCg > 1:4766670‑M1/15‑76 (MQ=255) accccatAAACACCACCACTGcatctctgccgccgcaagaatcaaacctgcgggcaggaaaacgcgcggattcgag > 2:1132876‑M2/3‑21 (MQ=255) ccATAAACAACATCACTGcatcactgccgccgccagaatcaaacctgcgggcaggaaaacgcgcggattcgagcga < 2:2114017‑M2/76‑59 (MQ=255) aacatcactgCATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATAc < 2:6399911‑M1/66‑1 (MQ=255) cATAAACAACACCACTGcatcactgccgccgccagaatcaaacctgcgggcaggaaaacgcgcggattcgagcgat > 2:6123681‑M2/1‑17 (MQ=255) ctccactgCACCACGGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCg > 2:2503006‑M1/9‑76 (MQ=255) aTAAACAACATCACTGcatcactgccgccgccagaatcaaacctgcgggcaggaaaacgcgcggattcgagcgatc < 1:4314205‑M2/76‑61 (MQ=255) tAAACAACATCACTGcatcactgccgccgccagaatcaaacctgcgggcaggaaaacgcgcggattcgagcgatcc < 2:1204487‑M2/76‑62 (MQ=255) atcactgCACCCCGGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGa > 1:2703223‑M1/8‑76 (MQ=255) tcactgCATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGaa < 2:1593981‑M1/70‑1 (MQ=255) aaaCAACATCACTGcatcccggccgccgccagaatcaaacctgcgggcaggaaaacgcgcggattcgagcgatccg > 2:4802993‑M2/1‑14 (MQ=255) aaaCAACATCACTGcatcactgccgccgccagaatcaaacctgcgggcaggagaacgcgcggattcgagcgatccg < 1:1904347‑M2/76‑63 (MQ=255) cactgCATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGTGCGGATTCGAGCGATCCGATACCGAAc < 1:3193995‑M1/71‑1 (MQ=255) actgCATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAAcc < 1:5504181‑M1/72‑1 (MQ=255) actgCATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAAcc < 1:6649100‑M1/72‑1 (MQ=255) actgCATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAAcc < 1:6997556‑M1/72‑1 (MQ=255) aacaTCACTGcatcactgccgccgccagaatcaaacctgcgggcaggaaaacgcgcggattcgagcgatccgatac < 2:3094768‑M2/76‑67 (MQ=255) CATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATg < 1:3971276‑M1/76‑1 (MQ=255) | CCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATG > REL606/2298687‑2298837 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |