| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | REL606 | 2,298,770 | (ATCACTGC)1→2 | coding (313/1359 nt) | glpT ← | sn‑glycerol‑3‑phosphate transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 2298762 = | 24 (0.100) | 184 (0.800) | 94/148 | 0.5 | 91.4% | coding (321/1359 nt) | glpT | sn‑glycerol‑3‑phosphate transporter |
| ? | REL606 | = 2298769 | 11 (0.050) | coding (314/1359 nt) | glpT | sn‑glycerol‑3‑phosphate transporter | |||||
Only 100 of 371 total aligned reads displayed.
CAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATT > REL606/2298694‑2298844 | agagGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGc < 1:4213817‑M2/76‑2 (MQ=255) agagGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGc < 1:4613118‑M2/76‑2 (MQ=255) agagGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGc < 2:6161700‑M2/76‑2 (MQ=255) aacagtacaaacatcaccgcaatgctcgacgtcgcccatggaacaaagcccataaacaacatcactgcatcactgc < 1:7418117‑M1/9‑1 (MQ=255) gagGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGca > 1:59947‑M2/1‑74 (MQ=255) agtacaaacatcaccgcaatgctcgacgtcgcccatggcacaaagcccataaacaacatcactgCATCACTgccgc < 2:7506463‑M1/12‑1 (MQ=255) gtacaaacatcaccgcaatgctcgacgtcgcccatggcacaaagcccataaacaacatcactgCATCACTgccgcc < 2:6839591‑M1/13‑1 (MQ=255) gAACAACAGGACAAACATCACCGCAATGCGCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatca > 2:3199655‑M2/1‑71 (MQ=255) tacaaacatcaccgcaatgctcgacgtcgcccatggcacaaagcccataaacaacatcactgCATCACTgccgccg > 1:3765520‑M1/63‑76 (MQ=255) tacaaacatcaccgcaatgctcgacgtcgcccatggcacaaagcccataaacaacatcactgCATCACTgccgccg < 1:384585‑M1/14‑1 (MQ=255) tacaaacatcaccgcaatgctcgacgtcgcccatggcacaaagcccataaacaacatcactgCATCACTgccgccg < 2:365910‑M1/14‑1 (MQ=255) aacaacAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcac > 1:1922361‑M2/1‑70 (MQ=255) aacaacAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcac > 1:5886997‑M2/1‑70 (MQ=255) acaacaGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcact > 1:5437017‑M2/1‑69 (MQ=255) acaacaGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcact < 2:6970005‑M2/76‑8 (MQ=255) acaaacatcaccgcaatgctcgacgtcgcccatggcacaaagcccataaacaacatcactgCATCACTgccgccgc < 2:5398536‑M1/15‑1 (MQ=255) aacatcaccgcaatgctcgacgtcgcccatggcacaaagcccataaacaacatcactgCATCACTGCCGCCGCCAg > 2:309726‑M1/59‑76 (MQ=255) aacatcaccgcaatgctcgacgtcgcccatggcacaaagcccataaacaacatcactgCATCACTGCCGCCGCCAg > 2:6078791‑M1/59‑76 (MQ=255) aacatcaccgcaatgctcgacgtcgcccagggcacaaagcccataaacaacatcactgCATCACTGCCGCCGCCAg > 2:5863785‑M1/59‑76 (MQ=255) caGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccg < 1:6807891‑M2/76‑12 (MQ=255) acatcaccgcaatgctcgacgtcgcccatggcacaaagcccatacacaacatcactgCATCACTGCCGCCGCCAGa < 2:5591142‑M1/19‑1 (MQ=255) acatcaccgcaatgctcgacgtcgcccatggcacaaagcccataaacaacatcactgCATCACTGCCGCCGCCAGa < 1:3793849‑M1/19‑1 (MQ=255) catcaccgcaatgctcgacgtcgcccatggcacaaagcccataaacaacatcactgCATCACTGCCGCCGCCAGaa > 2:1176176‑M1/57‑76 (MQ=255) catcaccgcaatgctcgacgtcgcccatggcacaaagcccataaacaacatcactgCATCACTGCCGCCGCCAGaa > 2:1500128‑M1/57‑76 (MQ=255) aGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgc < 1:2445028‑M2/76‑13 (MQ=255) aGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgc > 1:99406‑M2/1‑64 (MQ=255) gTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgcc < 2:2507752‑M2/76‑14 (MQ=255) gTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgcc > 2:5232217‑M2/1‑63 (MQ=255) atcaccgcaatgctcgacgtcgcccatggcacaaagcccataaacaacatcactgCATCACTGCCGCCGCCAGAAt > 1:634186‑M1/56‑76 (MQ=255) tcaccgcaatgctcgacgtcgcccatggcacaaagcccataaacaacatcactgCTTCACTGCCGCCGCCAGAATc > 2:5651291‑M1/55‑76 (MQ=255) tcaccgcaatgctcgacgtcgcccatggcacaaagcccataaacaacatcactgCATCACTGCCGCCGCCAGAATc > 1:5095748‑M1/55‑76 (MQ=255) tACAAACATCCCCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccg > 1:4828235‑M2/1‑62 (MQ=255) caccgcaatgctcgacgtcgcccatggcacaaagcccataaacaacatcactgCATCACTGCCGCCGCCAGAATCa < 1:406910‑M1/23‑1 (MQ=255) aCAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgc < 1:296622‑M2/76‑16 (MQ=255) aCAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgc < 1:4222735‑M2/76‑16 (MQ=255) aCAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgc < 1:1100744‑M2/76‑16 (MQ=255) cccgcaatgctcgacgtcgcccatggcacaaagcccataaacaacatcactgCATCACTGCCGCCGCCAGAATCaa > 2:7314936‑M1/53‑76 (MQ=255) cAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgcc > 1:6124660‑M2/1‑60 (MQ=255) aaCATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgccag > 1:5190587‑M2/1‑58 (MQ=255) gcaatgctcgacgtcgcccatggcacaaagcccataaacaacatcactgCATCACTGCCGCCGCCAGAATCAAAcc < 2:440852‑M1/27‑1 (MQ=255) aCATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgccaga < 2:6530704‑M2/76‑20 (MQ=255) aatgctcgacgtcgcccatggcacaaagcccataaacaacatcactgCATCACTGCCGCCGCCAGAATCAAACCTg < 1:667261‑M1/29‑1 (MQ=255) tCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgccagaatc < 1:5778672‑M2/76‑23 (MQ=255) atgttcgacgtcgcccatggcacaaagcccataaacaacatcactgCATCACTGCCGCCGCCAGAATCAAACCTGc < 2:41239‑M1/30‑1 (MQ=255) cACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgccagaatca < 1:6115778‑M2/76‑24 (MQ=255) cACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgccagaatca < 1:2398493‑M2/76‑24 (MQ=255) gctcgacgtcgcccatggcacaaagcccataaacaacatcactgCATCACTGCCGCCGCCAGAATCAAACCTGCgg > 1:4384703‑M1/45‑76 (MQ=255) ccGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgccagaatcaaa < 1:1217975‑M2/76‑26 (MQ=255) tcgacgtcccccagggcacaaagccaaaaaacaacatcactgCACCACTGCCGCCGCCAGAATCAAACCTGCGGGc > 2:2126361‑M1/43‑76 (MQ=255) cGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgccagaatcaaac > 1:6983884‑M2/1‑50 (MQ=255) gacgtcgcccatggcacaaagcccataaacaacatcactgCATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAg > 1:4498406‑M1/41‑76 (MQ=255) gacgtcgcccatggcacaaagcccataaacaacatcactgCATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAg < 2:371646‑M1/36‑1 (MQ=255) cAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgccagaatcaaacct < 2:4509506‑M2/76‑29 (MQ=255) cAATGCGCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgccagaatcaaacct > 2:4832122‑M2/1‑48 (MQ=255) acgtcgcccatggcacaaagcccataaacaacatcactgCATCACTGCCGCCGCCAGCATCAAACCTGCGGGCAgg < 1:7147419‑M1/37‑1 (MQ=255) aaTGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgccagaatcaaacctg < 1:357743‑M2/76‑30 (MQ=255) aaTGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgccagaatcaaacctg < 1:2631712‑M2/76‑30 (MQ=255) tcgcccatggcacaaagcccataaacaacatcactgCATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGaaa < 2:4503013‑M1/40‑1 (MQ=255) gCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgccagaatcaaacctgcgg < 2:2298127‑M2/76‑33 (MQ=255) ccgcccatggcacaaagcccataaacaacatcactgCATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGaaa > 2:856016‑M1/37‑76 (MQ=255) cgcccatggcacaaagcccataaacaacatcactgCATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGaaaa < 1:2110565‑M1/41‑1 (MQ=255) cGACGGCCCCCAGGGCAAAAAGCCCATAAACAACATCCCTGcaccactgccgccgccagaatcaaacctgcgggca > 2:2209402‑M2/1‑41 (MQ=255) gACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgccagaatcaaacctgcgggcag < 1:3435779‑M2/76‑37 (MQ=255) gcgTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcaacacggccgccgccagaatcaaacctgcgggcagg > 2:1078734‑M2/2‑39 (MQ=255) tggcacaaagcccataaacaacatcactgCATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAAcgcgcg < 2:3370971‑M1/47‑1 (MQ=255) gTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgccagaatcaaacctgcgggcaggaa > 1:4114259‑M2/1‑37 (MQ=255) gTCGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgccagaatcaaacctgcgggcaggaa < 1:1607186‑M2/76‑40 (MQ=255) cGCCCATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgccagaatcaaacctgcgggcaggaaaa < 1:5075105‑M2/76‑42 (MQ=255) cccATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgccagaatcaaacctgcgggcaggaaaacg < 2:1967913‑M2/76‑44 (MQ=255) acaaagcccataaacaacatcactgCATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGAtt > 1:1718762‑M1/26‑76 (MQ=255) ccATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgccagaatcaaacctgcgggcaggaaaacgc < 2:1407491‑M2/76‑45 (MQ=255) cATGGCACAAAGCCCATAAACAACATCACTGcatcactgccgccgccagaatcaaacctgcgggcaggaaaacgcg < 1:2767949‑M2/76‑46 (MQ=255) aaagcccataaacaacatcactgCATCACTGCCGCCGCCAGAATCAAATCTGCGGGCAGGAAAACGCGCGGATTCg < 1:1031687‑M1/53‑1 (MQ=255) ccataaacaacatcactgCATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGa < 2:3784487‑M1/58‑1 (MQ=255) ccataaacaacatcactcCATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGa > 2:293256‑M1/19‑76 (MQ=255) cataaacaacatcactgCATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGTTTCGAGCGAt < 1:1831978‑M1/59‑1 (MQ=255) caAAGCCCATAAACAACATCACTGcatcactgccgccgccagaatcaaacctgcgggcaggaaaacgcgcggattc < 2:2458601‑M2/76‑53 (MQ=255) ataaacaacatcactgCATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATc < 1:4314205‑M1/60‑1 (MQ=255) taaacaacatcactgCATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATcc < 2:2325794‑M1/61‑1 (MQ=255) aaaGCCCATAAACAACATCACTGcatcactgccgccgccagaatcaaacctgcgggcaggaaaacgcgcggattcg < 2:1891021‑M2/76‑54 (MQ=255) aaaGCCCATAAACAACATCACGGcatcactgccgccgccagaatcaaacctgcgggcaggaaaacgcgcggattcg > 2:2663472‑M2/1‑23 (MQ=255) aaacaacacccctgCATCCCTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCg > 1:4766670‑M1/15‑76 (MQ=255) acaacatcactgCATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGAt < 1:3342246‑M1/64‑1 (MQ=255) aacatcactgCATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATAc < 2:6399911‑M1/66‑1 (MQ=255) aacatcactgCATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATAc < 1:2818088‑M1/66‑1 (MQ=255) tcacggCATCCCGGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGaa > 1:7669114‑M1/7‑76 (MQ=255) aaaCAACATCACTGcatcccggccgccgccagaatcaaacctgcgggcaggaaaacgcgcggattcgagcgatccg > 2:4802993‑M2/1‑14 (MQ=255) aaaCAACATCACGGcatcactgccgccgccagaatcaaacctgcgggcaggaaaacgcgcggattcgagcgatccg > 1:2841015‑M2/1‑14 (MQ=255) actgCATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAAcc < 1:6649100‑M1/72‑1 (MQ=255) acacCCCTGcatcactgccgccgccagaatcaaacctgcgggcaggaaaacgcgcggattcgagcgatccgatacc > 1:5604289‑M2/1‑9 (MQ=255) CATCATTGCCGCCCCCAGAATAAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATg > 1:6452409‑M1/1‑76 (MQ=255) tcactgcatcactgccgccgccagaatcaaacctgcgggcaggaaaacgcgcggattcgagcgatccgataccgaa < 2:1593981‑M2/76‑71 (MQ=255) tCACGGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCatgat < 1:7582006/76‑1 (MQ=255) cactgcatcactgccgccgccagaatcaaacctgcgggcaggaaaacgtgcggattcgagcgatccgataccgaac < 1:3193995‑M2/76‑72 (MQ=255) actgcatcactgccgccgccagaatcaaacctgcgggcaggaaaacgcgcggattcgagcgatccgataccgaacc < 1:5294723‑M2/76‑73 (MQ=255) ctgcatcactgccgccgccagaatcaaacctgcgggcaggaaaacgcgcggattcgagcgatccgataccaaaccc < 1:7016868‑M2/76‑74 (MQ=255) tgcatcactgccgccgccagaatcaaacctgcgggcaggaaaacgcgcggattcgagcgatccgataccgaaccca < 1:3553228‑M2/76‑75 (MQ=255) gccgccgccAGAATCAACCCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAAtt < 1:2219203/76‑1 (MQ=255) gccgccgccAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAAtt > 2:1382907/1‑76 (MQ=255) gcccccgccAGAATCAACCCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAAtt < 1:7255129/76‑1 (MQ=255) | CAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATT > REL606/2298694‑2298844 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |