mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal read alignment evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | REL606 | 2,296,329 | 0 | A | C | 48.8% | 41.8 / 21.3 | 41 | intergenic (‑149/‑66) | inaA/yfaH | hypothetical protein/hypothetical protein |
| * | REL606 | 1,747,903 | 0 | G | T | 39.3% | 68.1 / 57.0 | 56 | A8S (GCA→TCA) | ydiL | hypothetical protein |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 570046 = | 36 (0.790) | 4 (0.090) | 3/142 | 6.1 | 7.3% | intergenic (‑110/+569) | yhhI/ECB_00526 | predicted transposase/hypothetical protein |
| ? | REL606 | 570481 = | 67 (1.550) | intergenic (‑545/+134) | yhhI/ECB_00526 | predicted transposase/hypothetical protein | |||||