| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 3203123 | 301 (1.230) | 16 (0.090) +GTTTACGCTGGCGGGTTTTCGT |
9/106 | 11.6 | 7.2% | intergenic (+571/+431) | yhaC/garK | hypothetical protein/glycerate kinase I |
| ? | REL606 | 3203139 = | 289 (1.180) | intergenic (+587/+415) | yhaC/garK | hypothetical protein/glycerate kinase I | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 302 total aligned reads displayed.
TAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGC > REL606/3203048‑3203198 | aGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAA‑CCCGCCGaa > 1:7596143/1‑76 (MQ=255) gCCTCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAC‑CCCGCCGAAg < 2:412350/76‑1 (MQ=255) gCCTCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAC‑CCCGCCGAAg < 2:6040092/76‑1 (MQ=255) cGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAA‑CCCGCCGAAGCg > 1:2515213/1‑76 (MQ=255) ctttctttTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAA‑CCCGCCGAAGCggg > 2:3071736/1‑76 (MQ=255) tttctttTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAA‑CCCGCCGAAGCGGGt > 1:1388411/1‑76 (MQ=255) tttctttTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAA‑CCCGCCGAAGCGGGt > 2:7333591/1‑76 (MQ=255) tctttTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAA‑CCCGCCGAAGCGGGttt < 2:6804613/76‑1 (MQ=255) ctttTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAA‑CCCGCCGAAGCGGGtttt > 1:1012239/1‑76 (MQ=255) tttgGGGTATAGTGTGGGGGACATTCATTCATCTTTCTGCCCCTCCAAAACCAAAAC‑CCCGCCGAAGCGGGttttt < 1:6337844/76‑1 (MQ=18) tttGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTa > 1:2984810/1‑76 (MQ=255) ttggggTATAGTGTCGTGGACATTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAC‑CCCGCCGAAGCGGGTTTTTa < 1:7384495/73‑1 (MQ=18) tGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAGGCAAAAC‑CCGGCCGAGCCGGGTTTTTACg > 2:2132621/1‑76 (MQ=17) ggttataGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAACAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGt < 2:6056575/73‑1 (MQ=255) gggTATGGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAC‑CCCGCCGAAGCGGGTTTTTACGt < 2:488949/76‑1 (MQ=255) gggTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGt < 2:6423941/76‑1 (MQ=255) gggTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGt > 1:3670881/1‑76 (MQ=255) ggTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAC‑CCCGCCGAAGCGGGTTTTTACGTa < 2:7225729/76‑1 (MQ=255) ggTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGTa < 1:3790187/76‑1 (MQ=255) ggTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGTa > 2:1043801/1‑76 (MQ=255) ataGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGTAAAt < 2:3823194/76‑1 (MQ=255) ataGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGTAAAt > 2:5770088/1‑76 (MQ=255) aGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGTAAATCa > 2:4464968/1‑76 (MQ=255) tgtCGTGGACAGTCATTCATCTTTCTGCCCCTCAAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGTAAATCAgg < 1:3232720/76‑1 (MQ=255) gtCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGt > 2:2680338/1‑76 (MQ=255) gtCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAA‑CCCGCCGAAGCGGGATTTTACGTAAATCAGGt > 1:1836138/1‑76 (MQ=255) tCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTg > 1:1574950/1‑76 (MQ=255) tCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTg < 1:6504335/76‑1 (MQ=255) cGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGa > 1:1751219/1‑76 (MQ=255) cGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGa > 1:4713679/1‑76 (MQ=255) gTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGaa > 1:998678/1‑76 (MQ=255) gTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGaa > 1:3275547/1‑76 (MQ=255) ggACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAAc > 1:596137/1‑76 (MQ=255) gACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACt > 2:3976761/1‑76 (MQ=255) aCATTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAC‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTg < 1:496290/76‑1 (MQ=255) aCAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTg > 1:517748/1‑76 (MQ=255) aCAGTCATTCATCTTCCTGCCCCTCCAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTg < 1:6611579/76‑1 (MQ=255) cAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGa > 1:3398377/1‑76 (MQ=255) cAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGa < 2:3463478/76‑1 (MQ=255) aGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAC‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGAc < 1:4283846/76‑1 (MQ=255) gTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGAcc < 2:3624254/76‑1 (MQ=255) cattcatCTTTCTGCCCCTCCAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGa > 1:4435183/1‑76 (MQ=255) cattcatCTTTCTGCCCCTCCAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGa > 1:2743855/1‑76 (MQ=255) cattcatCTTTCTGCCCCTCCAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGa > 1:1961812/1‑76 (MQ=255) cattcatCTTTCTGCCCCTCCAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGa > 1:1333426/1‑76 (MQ=255) cattcatCTTTCTGACCCTCCAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAACCTGACCGa > 2:4645888/1‑76 (MQ=255) ttcatCTTTCTGCCCCTCAAAAAGCAAAAC‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATa < 1:4569625/76‑1 (MQ=255) tcatCTTTCTGCCCCTCCAAAAGCAAAAC‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATaa < 1:7128438/76‑1 (MQ=255) tcatCTTTCTGCCCCTCCAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATaa > 1:4799665/1‑76 (MQ=255) catCTTTCTGCCCCTCCAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAg > 1:1099526/1‑76 (MQ=255) catCTTTCTGCCCCTCCAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAg > 1:747003/1‑76 (MQ=255) tCTTTCTGCCCCTCCAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGcc < 2:3688472/76‑1 (MQ=255) cTTTCTGCCCCTCCAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCg > 2:1348038/1‑76 (MQ=255) cTTTCTGCCCCTCCAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCg > 2:5064909/1‑76 (MQ=255) cTTTCTCCCCCTCAAAAAGCAAAAC‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCg < 1:149806/76‑1 (MQ=25) tttCTGCCCCTCCAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCgg > 2:1998608/1‑76 (MQ=255) ttCTGCCCCTCCAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCggg > 2:336867/1‑76 (MQ=255) ttCTGCCCCTCCAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCggg > 2:242366/1‑76 (MQ=255) tCTGCCCCTCCAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGt > 2:5789733/1‑76 (MQ=255) cTGCCCCTCCAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGtt > 2:2336092/1‑76 (MQ=255) gCCCCTCCAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCt > 2:6742843/1‑76 (MQ=255) gCCCCTCCAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCt > 2:6916390/1‑76 (MQ=255) gCCCCTCCAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCt > 2:5639895/1‑76 (MQ=255) ccccccAAAAAGCAAAAC‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTg < 1:4126015/76‑1 (MQ=25) ccccTCCAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTg > 2:2933649/1‑76 (MQ=255) ccccTCAAAAGCCAAAAC‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTg < 2:629199/76‑1 (MQ=25) cccTCCAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGt > 1:4866864/1‑76 (MQ=255) cTCCAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCg > 1:2010935/1‑76 (MQ=255) tCCAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGt > 2:616498/1‑76 (MQ=255) ctcaaaaacaaaaacCCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCg < 2:2342486/74‑1 (MQ=25) ccAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTg > 2:6071861/1‑76 (MQ=255) ccAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTg > 2:7740375/1‑76 (MQ=255) ccAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTg > 2:1627527/1‑76 (MQ=255) ccAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTg > 1:5583069/1‑76 (MQ=255) cAAAAGCAAAAC‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTgg < 2:1199213/76‑1 (MQ=255) aaaaGCAAAAC‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGa < 1:702234/76‑1 (MQ=255) aaaGCAAAAC‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGAc < 2:1512910/76‑1 (MQ=255) aaaGCAAAAC‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGAc < 2:3175441/76‑1 (MQ=255) aGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAg < 2:1860341/76‑1 (MQ=255) acAAAAC‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGt < 1:4642792/75‑1 (MQ=255) cAAAAC‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGtc < 1:573662/76‑1 (MQ=255) aaac‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGtcat < 1:610072/76‑1 (MQ=255) aaaa‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGtcat > 1:1451469/1‑76 (MQ=255) aaa‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGtcatt > 1:1223319/1‑76 (MQ=255) aaccccGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGtcatt < 1:6163159/73‑1 (MQ=255) aaccccGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGtcatt < 2:6663023/73‑1 (MQ=255) aa‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGtcattc > 2:5246273/1‑76 (MQ=255) aa‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGtcattc > 2:7098446/1‑76 (MQ=255) a‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGtcattca < 1:309996/76‑1 (MQ=255) cccGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGtcattcat < 1:883931/76‑1 (MQ=255) cgccgAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCt < 1:7220942/76‑1 (MQ=255) gccgAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTa < 1:3969868/76‑1 (MQ=255) gccgAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTa > 1:3614370/1‑76 (MQ=255) gccgAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTa < 2:7610526/76‑1 (MQ=255) gccgAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTa < 2:5531106/76‑1 (MQ=255) ccgAAGTCGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAg < 2:5441659/76‑1 (MQ=255) ccgAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAg < 2:6560344/76‑1 (MQ=255) ccgAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAg < 1:5384178/76‑1 (MQ=255) ccgAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAg < 1:2210557/76‑1 (MQ=255) cgAAGCAGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAgg < 1:953803/76‑1 (MQ=255) | TAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAA‑CCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGC > REL606/3203048‑3203198 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |