| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 3203123 | 301 (1.230) | 16 (0.090) +GTTTACGCTGGCGGGTTTTCGT |
9/106 | 11.6 | 7.2% | intergenic (+571/+431) | yhaC/garK | hypothetical protein/glycerate kinase I |
| ? | REL606 | 3203139 = | 289 (1.180) | intergenic (+587/+415) | yhaC/garK | hypothetical protein/glycerate kinase I | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 292 total aligned reads displayed.
GGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTG > REL606/3203064‑3203214 | ggttataGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAACAGCAAAAACCCGCCGAAGCGGGTTTTTACGt < 2:6056575/73‑1 (MQ=255)gggTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGt < 2:6423941/76‑1 (MQ=255) ggTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTa > 2:1043801/1‑76 (MQ=255) tataGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGGTTTTACGTaaa > 1:6610787/1‑76 (MQ=255) ataGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAACCCCGCCGAAGCGGGTTTTTACGTAAAt < 1:3354927/76‑1 (MQ=255) taGTGTGGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAACCCCGCCGAAGCGGGTTTTTACGTAAATc < 2:749199/76‑1 (MQ=255) taGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATc > 1:684885/1‑76 (MQ=255) taGTGTCGTGGACAGTCATTCATCTTTCGGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATc < 2:3875632/76‑1 (MQ=255) tgtCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAgg > 1:4940087/1‑76 (MQ=255) gtCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGt > 2:2680338/1‑76 (MQ=255) gtCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGATTTTACGTAAATCAGGt > 1:1836138/1‑76 (MQ=255) tCGTGGACAGTCTTTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTg < 1:1681383/76‑1 (MQ=255) tCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAACCCCGCCGAAGCGGGTTTTTACGTAAATCAGGTg < 2:1012239/76‑1 (MQ=255) tCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTg < 2:2355660/76‑1 (MQ=255) tCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTg < 1:3637272/76‑1 (MQ=255) tCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTg < 2:5776110/76‑1 (MQ=255) ggTGGACAGTCATTCACCTTCCTGCCCCTCCAAAACCAAAACCCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGa < 2:2336662/75‑1 (MQ=25) gTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAACCCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGaa < 1:2832879/76‑1 (MQ=255) aggACAGTCATTCATGTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGGTTCTACGTCAATCAGGCGaaa > 2:1876451/2‑76 (MQ=18) ggACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAAc > 1:596137/1‑76 (MQ=255) aCAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTg > 1:517748/1‑76 (MQ=255) aCAGTCATTCATCTTTCTCCCCCCCCAAAAGCAAAACCCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTg < 1:4396780/76‑1 (MQ=37) cattcattcatCTTTCTGCCCCTCCAAAAGCAAAACCCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGa < 1:2717421/73‑1 (MQ=255) cAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGa < 2:3463478/76‑1 (MQ=255) aGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAACCCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGAc < 1:4283846/76‑1 (MQ=255) gTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGAcc < 2:3624254/76‑1 (MQ=255) gTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGAcc < 1:4742805/76‑1 (MQ=255) tgtttcatCTTCCCCCCCCCCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCg < 1:1563394/73‑1 (MQ=25) tcattcatCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCg > 2:953803/1‑76 (MQ=255) tcattcatCTTTCTGCCCCTCAAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCg < 1:1012999/76‑1 (MQ=255) tattcatCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGa > 2:5951040/2‑76 (MQ=255) cattcatCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGa > 1:1333426/1‑76 (MQ=255) cattcatCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGa > 2:405712/1‑76 (MQ=255) cattcatCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGa > 1:5159802/1‑76 (MQ=255) tcatCTTTCTGCCCCTCCAAAAGCAAAACCCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATaa < 1:7128438/76‑1 (MQ=255) tcatCTTTCTGCCCCTCCAAAAGCAAAACCCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATaa < 2:5157420/76‑1 (MQ=255) tCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGcc > 2:6748301/1‑76 (MQ=255) tCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGcc < 2:3688472/76‑1 (MQ=255) cTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCg > 2:1348038/1‑76 (MQ=255) tttCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCgg > 2:7225783/1‑76 (MQ=255) tttCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCgg > 1:1898995/1‑76 (MQ=255) ttCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCggg > 2:336867/1‑76 (MQ=255) tcccccTCCAAAAGCAAAACCCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTc < 2:2040710/74‑1 (MQ=255) gCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCt > 1:2127843/1‑76 (MQ=255) ccccTCAAAAGCCAAAACCCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTg < 2:629199/76‑1 (MQ=25) cccTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGt > 1:720136/1‑76 (MQ=255) ccTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTc < 2:3145160/76‑1 (MQ=255) cTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCg > 1:2010935/1‑76 (MQ=255) cTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCg > 1:1455661/1‑76 (MQ=255) tCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGt > 2:6879518/1‑76 (MQ=255) tCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGt > 2:616498/1‑76 (MQ=255) cccAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGt < 2:7739314/75‑1 (MQ=255) ccAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTg > 2:1627527/1‑76 (MQ=255) ccAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTg > 2:4693013/1‑76 (MQ=255) ccAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTg > 1:3455717/1‑76 (MQ=255) ccAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTg > 2:7145812/1‑76 (MQ=255) ccAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTg > 1:4637/1‑76 (MQ=255) ccAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTg > 1:4679675/1‑76 (MQ=255) ccAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTg > 2:4361177/1‑76 (MQ=255) ccAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTg > 1:5324455/1‑76 (MQ=255) cAAAAGCAAAACCCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTgg < 1:7402066/76‑1 (MQ=255) cAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTgg > 1:3945285/1‑76 (MQ=255) aaaaGCAAAACCCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGa < 1:702234/76‑1 (MQ=255) aaaGCAAAACCCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGAc < 2:1512910/76‑1 (MQ=255) aaaGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGAc > 1:326672/1‑76 (MQ=255) aaaGAAAACCCCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGAc < 2:2233960/76‑1 (MQ=25) gCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGt > 1:6233048/1‑76 (MQ=255) cAAAACCCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGtc < 1:573662/76‑1 (MQ=255) cAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGtc > 2:2872463/1‑76 (MQ=255) cAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGtc > 1:3036587/1‑76 (MQ=255) aaacCCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGtcat < 1:610072/76‑1 (MQ=255) aaccccGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGtcatt < 1:1407910/73‑1 (MQ=255) aaccccGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGtcatt < 2:6663023/73‑1 (MQ=255) aaaCCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGtcatt > 1:1223319/1‑76 (MQ=255) aaaCCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGtcatt > 2:4633715/1‑76 (MQ=255) aaCCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGtcattc > 2:5246273/1‑76 (MQ=255) aCCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGtcattca > 2:1192718/1‑76 (MQ=255) cccGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGtcattcat > 2:691891/1‑76 (MQ=255) cccGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGtcattcat < 1:883931/76‑1 (MQ=255) cccGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGtcattcat < 1:3142223/76‑1 (MQ=255) cgccgAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCt > 1:640853/1‑76 (MQ=255) gccgAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTa < 2:5531106/76‑1 (MQ=255) gccgAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTa < 1:3969868/76‑1 (MQ=255) gccgAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTa < 1:7495327/76‑1 (MQ=255) ccgAAGTCGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAg < 2:5441659/76‑1 (MQ=255) ccgAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAg < 2:6560344/76‑1 (MQ=255) cgAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAgg > 1:4850384/1‑76 (MQ=255) cgAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAgg > 1:4147996/1‑76 (MQ=255) cgAAGCAGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAgg < 1:953803/76‑1 (MQ=255) aGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCa > 1:909596/1‑76 (MQ=255) aGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCa < 1:3684009/76‑1 (MQ=255) ggTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCaa < 2:1748231/76‑1 (MQ=255) ggTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCaa > 2:4897003/1‑76 (MQ=255) tttttACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATc < 2:6124895/76‑1 (MQ=255) tttttACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATc < 1:5534996/76‑1 (MQ=255) ttttACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCg > 1:2567950/1‑76 (MQ=255) ttACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCt < 1:7348710/76‑1 (MQ=255) ttACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCt > 1:1112598/1‑76 (MQ=255) tACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTc > 1:4566066/1‑76 (MQ=255) tAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTg > 2:5695959/1‑76 (MQ=255) | GGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTG > REL606/3203064‑3203214 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |