| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | REL606 | 1,297,423 | Δ10,224 bp | [ychE]–[kch] | [ychE], oppA, oppB, oppC, oppD, oppF, yciU, cls, [kch] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | REL606 | 1297423 | 1307646 | 10224 | 251 [3] | [5] 252 | [ychE]–[kch] | [ychE],oppA,oppB,oppC,oppD,oppF,yciU,cls,[kch] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 1297422 | 3 (0.010) | 241 (0.950) | 115/148 | 0.1 | 98.4% | coding (32/648 nt) | ychE | predicted inner membrane protein |
| ? | REL606 | 1307647 = | 5 (0.020) | coding (217/1254 nt) | kch | voltage‑gated potassium channel | |||||
Only 100 of 248 total aligned reads displayed.
TTATTTATGGCTAACATTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/1297347‑1297422‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAAAATGCTTTGATATGGAAAA > REL606/1307647‑1307721 TTATTTATGGCTAACATTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTA < 1:6304674/76‑1TTATTTATGGCTAACATTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTA < 1:6141514/76‑1TTATTTATGGCTAACATTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTA < 1:26419/76‑1 TATTTATGGCTAACATTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAA < 2:3075142/76‑1 ATTTATGGCTAACATTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAG < 1:2082527/76‑1 TTTATGGCTAACATTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGA > 1:5460063/1‑76 TTTATGGCTAACATTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGA > 2:2987501/1‑76 TTATGGCTAACATTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGAC < 1:566828/76‑1 TTATGGCTAACATTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGAC > 2:6564122/1‑76 TTATGGCTAACATTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGAC < 1:7590610/76‑1 ATGGCTAACATTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGC > 2:4048582/1‑76 GGCTAACATTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCG > 2:2266915/1‑76 GGCTAACATTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCG < 2:3391856/76‑1 GCTAACATTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGA < 1:1062506/76‑1 GCTAACATTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGA < 1:6900980/76‑1 GCTAACATTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGA < 2:5501521/76‑1 CTAACATTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAG < 2:2319648/76‑1 CTAACATTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAG > 1:146733/1‑76 CTAACATTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAG > 1:1999150/1‑76 TAACATTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGC < 2:4587548/76‑1 TAACATTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGC > 2:7239053/1‑76 CATTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATA > 1:4260885/1‑76 CATTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATA > 1:3025947/1‑76 CATTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATA > 2:6130815/1‑76 TTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAA > 2:1839020/1‑76 TTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAA < 1:7648716/76‑1 TTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAA < 1:7013392/76‑1 TATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAAG < 1:886589/76‑1 TATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAAG > 1:6579311/1‑76 TATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAAG > 2:3870393/1‑76 TATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAAG < 2:4731840/76‑1 TATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAAG > 2:3290826/1‑76 CCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAAGAGT > 2:7089994/1‑76 CCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAAGAGT < 2:1465143/76‑1 CCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAAGAGT > 1:5325287/1‑76 CGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAAGAGTG < 1:8044789/76‑1 TGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTT > 2:8065395/1‑76 TGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTT < 2:743511/76‑1 TGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTT > 2:7331006/1‑76 TCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCC > 2:5321635/1‑76 CGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCA < 2:3679184/76‑1 CGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCA > 1:929010/1‑76 GGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAG > 1:2336327/1‑76 GAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGC < 2:417811/76‑1 AGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCA < 1:7203145/76‑1 AGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCA < 2:5700134/76‑1 CTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAG > 2:2647388/1‑76 CTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAG > 2:1909617/1‑76 TAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGG > 1:1016763/1‑76 TAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGG > 1:6543908/1‑76 AACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGA > 2:1513247/1‑76 AACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGA < 2:7932535/76‑1 AACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGA < 2:4673868/76‑1 AACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGA < 1:7259575/76‑1 CCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGA > 2:3003135/1‑76 CGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAG < 2:684571/76‑1 CGTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAG < 2:2077098/76‑1 GTGATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGA < 1:1738856/76‑1 TGATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGAT > 2:5462105/1‑76 ATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCC < 1:5443078/76‑1 ATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCC > 2:1197272/1‑76 ATTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCC < 1:4729855/76‑1 TTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCA < 2:4339057/76‑1 TTCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCA < 2:6366010/76‑1 TCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAA < 2:7675279/76‑1 TCAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAA > 2:8152690/1‑76 TCAGACCGTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAA < 2:3756328/76‑1 CAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAAC < 1:7803940/76‑1 CAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAAC > 2:4294365/1‑76 CAGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAAC > 1:2466821/1‑76 AGACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACT < 1:3788312/76‑1 GACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTC > 2:7849367/1‑76 ACCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCT < 1:4099190/76‑1 CCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTG < 2:2767248/76‑1 CCTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTG < 1:773168/76‑1 CTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGA > 1:5880557/1‑76 CTTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGA < 2:1542585/76‑1 TTTTTTGATTTTCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAA > 2:3937513/1‑76 TTTGATTTTCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAAAAT < 2:5601119/76‑1 TGATTTTCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAAAATGC > 1:5786623/1‑76 TGATTTTCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAAAATGC < 2:2205448/76‑1 GATTTTCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAAAATGCT > 1:4791083/1‑76 GATTTTCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAAAATGCT > 1:5107100/1‑76 TTTCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAAAATGCTTTG < 1:3138290/76‑1 TTTCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAAAATGCTTTG > 1:8178239/1‑76 TTCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAAAATGCTTTGA > 1:5086431/1‑76 TTCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAAAATGCTTTGA < 2:759473/76‑1 TCCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAAAATGCTTTGAT > 1:1524072/1‑76 CCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAAAATGCTTTGATA > 1:1572494/1‑76 CCCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAAAATGCTTTGATA > 1:4923985/1‑76 CCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAAAATGCTTTGATAT > 2:3163612/1‑76 CCGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAAAATGCTTTGATAT < 1:3339937/76‑1 CGTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAAAATGCTTTGATATG < 2:6958756/76‑1 GTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCGGCAAGGAGAGATCCAACTCTGAAAATGCTTTGATATGG > 2:1119942/1‑76 GTTTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAAAATGCTTTGATATGG < 1:3407507/76‑1 TTAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAAAATGCTTTGATATGGAA > 1:5986616/1‑76 TTAAGACGCCGAGCATAAAGAGCGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAAAATGCTTTGATATGGAA > 1:5021462/1‑76 TAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAAAATGCTTTGATATGGAAA > 1:1261523/1‑76 TAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAAAATGCTTTGATATGGAAA < 2:5012919/76‑1 AAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAAAATGCTTTGATATGGAAAA < 2:6062274/76‑1 TTATTTATGGCTAACATTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/1297347‑1297422‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAAAATGCTTTGATATGGAAAA > REL606/1307647‑1307721 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |