| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | REL606 | 1,297,423 | Δ10,224 bp | [ychE]–[kch] | [ychE], oppA, oppB, oppC, oppD, oppF, yciU, cls, [kch] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | REL606 | 1297423 | 1307646 | 10224 | 251 [3] | [5] 252 | [ychE]–[kch] | [ychE],oppA,oppB,oppC,oppD,oppF,yciU,cls,[kch] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 1297422 | 3 (0.010) | 241 (0.950) | 115/148 | 0.1 | 98.4% | coding (32/648 nt) | ychE | predicted inner membrane protein |
| ? | REL606 | 1307647 = | 5 (0.020) | coding (217/1254 nt) | kch | voltage‑gated potassium channel | |||||
Only 100 of 252 total aligned reads displayed.
TCAACAACAAAATGATACTGATTGCCCATGCGAGCTTTGCCCGGAACAGTAAGCCAATGGAGTTCAGGACAAGAAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAAAATGCTTTGATATGGAAAAT > REL606/1307572‑1307722 | tatttatggctaacattatccggcttttgcttcggagctaaccgtgattcagaccttttttgattttcccgtttaa < 1:5015421‑M2/1‑1 (MQ=255) atttatggctaacattatccggcttttgcttcggagctaaccgtgattcagaccttttttgattttcccgtttaAg < 1:2082527‑M2/2‑1 (MQ=255) ttatggctaacattatccggcttttgcttcggagctaaccgtgattcagaccttttttgattttcccgtttaAGAc > 2:6564122‑M2/73‑76 (MQ=255) ttatggctaacattatccggcttttgcttcggagctaaccgtgattcagaccttttttgattttcccgtttaAGAc < 1:7610928‑M2/4‑1 (MQ=255) tatggctaacattatccggcttttgcttcggagctaaccgtgattcagaccttttttgattttcccgtttaAGACg > 1:4299405‑M2/72‑76 (MQ=255) tatggctaacattatccggcttttgcttcggagctaaccgtgattcagaccttttttgattttcccgtttaAGACg > 1:7400356‑M2/72‑76 (MQ=255) atggctaacattatccggcttttgcttcggagctaaccgtgattcagaccttttttgattttcccgtttaAGACGc > 1:8154659‑M2/71‑76 (MQ=255) ggctaacattatccggcttttgcttcggagctaaccgtgattcagaccttttttgattttcccgtttaAGACGCCg < 2:3391856‑M2/8‑1 (MQ=255) gctaacattgtcctgcttttgcgtcggagctaaccgtgattcagaccttttttgattttcccgtttaAGACGCCGa < 1:3056466‑M2/9‑1 (MQ=255) gctaacattatccggcttttgcttcggagctaaccgtgattcagaccttttttgattttcccgtttaAGACGCCGa < 2:5501521‑M2/9‑1 (MQ=255) gctaacattatccggcttttgcttcggagctaaccgtgattcagaccttttttgattttcccgtttaAGACGCCGa < 1:1062506‑M2/9‑1 (MQ=255) ctaacattatccggcttttgcttcggagctaaccgtgattcagaccttttttgattttcccgtttaAGACGCCGAg < 2:2319648‑M2/10‑1 (MQ=255) ctaacattatccggcttttgcttcggagctaaccgtgattcagaccttttttgattttcccgtttaAGACGCCGAg > 1:146733‑M2/67‑76 (MQ=255) taacattatccggcttttgcttcggagctaaccgtgattcagaccttttttgattttcccgtttaAGACGCCGAGc < 2:4587548‑M2/11‑1 (MQ=255) taacattatccggcttttgcttcggagctaaccgtgattcagaccttttttgattttcccgtttaAGACGCCGAGc > 2:7239053‑M2/66‑76 (MQ=255) aacattatccggcttttgcttcggagctaaccgtgattcagaccttttttgattttcccgtttaAGACGCCGAGCa > 1:6161352‑M2/65‑76 (MQ=255) acattatccggcttttgcttcggagctaaccgtgattcagaccttttttgattttcccgtttaAGACGCCGAGCAt < 2:1501066‑M2/13‑1 (MQ=255) cattatccggcttttgcttcggagctaaccgtgattcagaccttttttgattttcccgtttaAGACGCCGAGCATa > 1:6618648‑M2/63‑76 (MQ=255) cattatccggcttttgcttcggagctaaccgtgattcagaccttttttgattttcccgtttaAGACGCCGAGCATa > 2:6130815‑M2/63‑76 (MQ=255) attatccggcttttgcttcggagctaaccgtgattcagaccttttttgattttcccgtttaAGACGCCGAGCATaa < 1:5713721‑M2/15‑1 (MQ=255) attatccggcttttgcttcggagctaaccgtgattcagaccttttttgattttcccgtttaAGACGCCGAGCATaa > 1:545033‑M2/62‑76 (MQ=255) ttatccggcttttgcttcggagctaaccgtgattcagaccttttttgattttcccgtttaAGACGCCGAGCATaaa > 1:4841671‑M2/61‑76 (MQ=255) ttatccggcttttgcttcggagctaaccgtgattcagaccttttttgattttcccgtttaAGACGCCGAGCATaaa < 1:4788954‑M2/16‑1 (MQ=255) ttatccggcttttgcttcggagctaaccgtgattcagaccttttttgattttcccgtttaAGACGCCGAGCATaaa > 1:3377056‑M2/61‑76 (MQ=255) tatccggcttttgcttcggagctaaccgtgattcagaccttttttgattttcccgtttaAGACGCCGAGCATAAag < 2:3198616‑M2/17‑1 (MQ=255) ccggcttttgcttcggagctaaccgtgattcagaccttttttgattttcccgtttaAGACGCCGAGCATAAAGAGt > 2:2054993‑M2/57‑76 (MQ=255) ccggcttttgcttcggagctaaccgtgattcagaccttttttgattttcccgtttaAGACGCCGAGCATAAAGAGt > 1:5325287‑M2/57‑76 (MQ=255) cttttgcttcggagctaaccgtgattcagaccttttttgattttcccgtttaAGACGCCGAGCATAAAGAGTgggg > 1:2308743‑M2/53‑76 (MQ=255) ttttgcttcggagctaaccgtgattcagaccttttttgattttcccgtttaAGACGCCGAGCATAAAGAGTGGGGc > 2:2256408‑M2/52‑76 (MQ=255) tttgcttcggagctaaccgtgattcagaccttttttgattttcccgtttaAGACGCCGAGCATAAAGAGTGGGGCg > 2:1339851‑M2/51‑76 (MQ=255) ttgcttcggagctaaccgtgattcagaccttttttgattttcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGt > 1:1900349‑M2/50‑76 (MQ=255) tgcttcggagctaaccgtgattcagaccttttttgattttcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGtt > 2:4287565‑M2/49‑76 (MQ=255) tgcttcggagctaaccgtgattcagaccttttttgattttcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGtt < 2:743511‑M2/28‑1 (MQ=255) gcttcggagctaaccgtgattcagaccttttttgattttcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGttt > 2:1631476‑M2/48‑76 (MQ=255) cttcggagctaaccgtgattcagaccttttttgattttcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTg > 2:7066098‑M2/47‑76 (MQ=255) ttcggagctaaccgtgattcagaccttttttgattttcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGc < 1:6416529‑M2/31‑1 (MQ=255) tcggagctaaccgtgattcagaccttttttgattttcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGcc > 2:5321635‑M2/45‑76 (MQ=255) ggagctaaccgtgattcagaccttttttgattttcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAg < 1:1537174‑M2/34‑1 (MQ=255) gagctaaccgtgattcagaccttttttgattttcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGc < 2:417811‑M2/35‑1 (MQ=255) agctaaccgtgattcagaccttttttgattttcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCa < 2:5700134‑M2/36‑1 (MQ=255) ctaaccgtgattcagaccttttttgattttcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAg > 2:1909617‑M2/39‑76 (MQ=255) taaccgtgattcagaccttttttgattttcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAgg < 1:720982‑M2/39‑1 (MQ=255) taaccgtgattcagaccttttttgattttcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAgg < 1:6960037‑M2/39‑1 (MQ=255) taaccgtgattcagaccttttttgattttcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAgg < 2:5533230‑M2/39‑1 (MQ=255) taaccgtgattcagaccttttttgattttcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAgg > 1:1016763‑M2/38‑76 (MQ=255) aaccgtgattcagaccttttttgattttcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGga > 1:5046029‑M2/37‑76 (MQ=255) aaccgtgattcagaccttttttgattttcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGga < 2:4673868‑M2/40‑1 (MQ=255) aaccgtgattcagaccttttttgattttcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGga < 1:7859053‑M2/40‑1 (MQ=255) aaccgtgattcagaccttttttgattttcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGga < 2:7932535‑M2/40‑1 (MQ=255) accgtgattcagaccttttttgattttcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGgag < 2:7329957‑M2/41‑1 (MQ=255) ccgtgattcagaccttttttgattttcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGgaga > 2:3003135‑M2/35‑76 (MQ=255) ccgtgattcagaccttttttgattttcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGgaga > 2:2950039‑M2/35‑76 (MQ=255) attcagaccttttttgattttcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATcc > 2:116401‑M2/30‑76 (MQ=255) ttcagaccttttttgattttcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCa < 2:4339057‑M2/48‑1 (MQ=255) ttcagaccttttttgattttcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCa < 1:8275795‑M2/48‑1 (MQ=255) tcagaccttttttgattttcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCaa > 2:8152690‑M2/28‑76 (MQ=255) tcagaccttttttgattttcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCaa > 2:4764025‑M2/28‑76 (MQ=255) tcagaccttttttgattttcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCaa < 1:900204‑M2/49‑1 (MQ=255) tcagaccttttttgattttcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCaa < 2:7675279‑M2/49‑1 (MQ=255) tcagaccgtttttgattttcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCaa < 2:3756328‑M2/49‑1 (MQ=255) cagaccttttttgattttcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAAc > 1:3870519‑M2/27‑76 (MQ=255) cagaccttttttgattttcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAAc > 1:2466821‑M2/27‑76 (MQ=255) cagaccttttttgatattcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAAc < 1:7650733‑M2/50‑1 (MQ=255) agaccttttttgattttcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAAct < 1:3788312‑M2/51‑1 (MQ=255) ccttttttgattttcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTg < 2:2767248‑M2/54‑1 (MQ=255) ccttttttgattttcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTg < 2:8004971‑M2/54‑1 (MQ=255) ccttttttgattttcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTg < 2:4018721‑M2/54‑1 (MQ=255) cttttttgattttcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGa > 1:5880557‑M2/22‑76 (MQ=255) cttttttgattttcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGa < 2:3676792‑M2/55‑1 (MQ=255) cttttttgattttcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGa > 1:7790862‑M2/22‑76 (MQ=255) cttttttgattttcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGa < 2:1542585‑M2/55‑1 (MQ=255) ttttttgattttcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGaa > 2:3937513‑M2/21‑76 (MQ=255) ttttttgattttcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGaa > 1:1262597‑M2/21‑76 (MQ=255) actGGAGTTCAGGACAAGAAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGaa < 1:1754160/74‑1 (MQ=255) tttgattttcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAAAAt < 2:5882934‑M2/59‑1 (MQ=255) tgattttcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAAAATGc < 2:2205448‑M2/61‑1 (MQ=255) gattttcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAAAATGCt > 2:7511484‑M2/15‑76 (MQ=255) ttttcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAAAATGCttt < 2:3862977‑M2/64‑1 (MQ=255) ttttcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAAAATGCttt > 1:5183115‑M2/13‑76 (MQ=255) ttttcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAAAATGCttt < 2:5345278‑M2/64‑1 (MQ=255) tttcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAAAATGCTTTg < 1:3138290‑M2/65‑1 (MQ=255) ttcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAAAATGCTTTGa > 1:5482689‑M2/11‑76 (MQ=255) tcccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAAAATGCTTTGat < 1:943925‑M2/67‑1 (MQ=255) ggACAAGAAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAAAATGCTTTGat < 1:4249813/76‑1 (MQ=255) cccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAAAATGCTTTGata > 1:1572494‑M2/9‑76 (MQ=255) cccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAAAATGCTTTGata > 1:7095327‑M2/9‑76 (MQ=255) ccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAAAATGCTTTGatat < 1:6565645‑M2/69‑1 (MQ=255) ccgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAAAATGCTTTGatat > 2:3163612‑M2/8‑76 (MQ=255) cgtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAAAATGCTTTGATATg < 2:6958756‑M2/70‑1 (MQ=255) gtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAAAATGCTTTGATATgg < 1:3407507‑M2/71‑1 (MQ=255) gtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAAAATGCTTTGATATgg > 2:636277‑M2/6‑76 (MQ=255) gtttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAAAATGCTTTGATATgg > 1:2622979‑M2/6‑76 (MQ=255) tttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAAAATGCTTTGATATGGa < 2:782338‑M2/72‑1 (MQ=255) tttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAAAATGCTTTGATATGGa > 2:2625914‑M2/5‑76 (MQ=255) agaaagaCGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAAAATGCTTTGATATGGa < 2:5000188/76‑1 (MQ=255) ttaAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAAAATGCTTTGATATGGaa > 1:5986616‑M2/4‑76 (MQ=255) taAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAAAATGCTTTGATATGGaaa > 1:5099506‑M2/3‑76 (MQ=255) aAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAAAATGCTTTGATATGGaaaa < 2:305887‑M2/75‑1 (MQ=255) aAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAAAATGCTTTGATATGGaaaa > 2:6717511‑M2/2‑76 (MQ=255) agaCGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAAAATGCTTTGATATGGAAAat > 1:5807761/1‑76 (MQ=255) | TCAACAACAAAATGATACTGATTGCCCATGCGAGCTTTGCCCGGAACAGTAAGCCAATGGAGTTCAGGACAAGAAAGACGCCGAGCATAAAGAGTGGGGCGTTTGCCAGCAAGGAGAGATCCAACTCTGAAAATGCTTTGATATGGAAAAT > REL606/1307572‑1307722 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |