| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | REL606 | 1,297,423 | Δ10,224 bp | [ychE]–[kch] | [ychE], oppA, oppB, oppC, oppD, oppF, yciU, cls, [kch] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | REL606 | 1297423 | 1307646 | 10224 | 251 [3] | [5] 252 | [ychE]–[kch] | [ychE],oppA,oppB,oppC,oppD,oppF,yciU,cls,[kch] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 1297422 | 3 (0.010) | 241 (0.950) | 115/148 | 0.1 | 98.4% | coding (32/648 nt) | ychE | predicted inner membrane protein |
| ? | REL606 | 1307647 = | 5 (0.020) | coding (217/1254 nt) | kch | voltage‑gated potassium channel | |||||
Only 100 of 251 total aligned reads displayed.
TTATTTATGGCTAACATTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTACTTCAAATTTTTCATCGGGTTATTTGCGCTGGTCAACCCGGTAGGGATTATTCCCGTCTTTATCAGCATGACCAG > REL606/1297347‑1297497 | ttatttatGGCTAACATTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTA < 1:6141514‑M1/76‑1 (MQ=255)ttatttatGGCTAACATTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTA < 1:26419‑M1/76‑1 (MQ=255)ttatttatGGCTAACATTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTA < 1:6304674‑M1/76‑1 (MQ=255) tatttatGGCTAACATTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAa < 2:1620004‑M1/76‑2 (MQ=255) atttatGGCTAACATTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAag > 2:2335352‑M1/1‑74 (MQ=255) tttatGGCTAACATTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAaga > 1:5460063‑M1/1‑73 (MQ=255) tttatGGCTAACATTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAaga > 2:2226115‑M1/1‑73 (MQ=255) ttatGGCTAACATTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAagac < 1:566828‑M1/76‑5 (MQ=255) ttatGGCTAACATTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAagac < 1:7590610‑M1/76‑5 (MQ=255) tatGGCTAACATTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAagacg < 2:7998688‑M1/76‑6 (MQ=255) tatGGCTAACATTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAagacg > 1:4299405‑M1/1‑71 (MQ=255) atGGCTAACATTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAagacgc > 2:4048582‑M1/1‑70 (MQ=255) tGGCTAACATTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAagacgcc > 2:5806295‑M1/1‑69 (MQ=255) ggCTAACATTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAagacgccg < 2:3391856‑M1/76‑9 (MQ=255) ggCTAACATTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTACTTCAAAt < 1:5299827/76‑1 (MQ=255) gCTAACATTGTCCTGCTTTTGCGTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAagacgccga < 1:3056466‑M1/76‑10 (MQ=255) gCTAACATTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAagacgccga < 1:6900980‑M1/76‑10 (MQ=255) gCTAACATTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAagacgccga < 1:1062506‑M1/76‑10 (MQ=255) cTAACATTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAagacgccgag > 1:1999150‑M1/1‑66 (MQ=255) cTAACATTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAagacgccgag > 1:146733‑M1/1‑66 (MQ=255) tAACATTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAagacgccgagc < 2:4587548‑M1/76‑12 (MQ=255) aaCATTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAagacgccgagca > 2:1972442‑M1/1‑64 (MQ=255) ttATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAagacgccgagcataaa < 1:7648716‑M1/76‑17 (MQ=255) ttATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAagacgccgagcataaa < 1:7013392‑M1/76‑17 (MQ=255) ttATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAagacgccgagcataaa > 2:8197804‑M1/1‑60 (MQ=255) ttATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAagacgccgagcataaa > 1:3377056‑M1/1‑60 (MQ=255) ttATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAagacgccgagcataaa > 1:4841671‑M1/1‑60 (MQ=255) tATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAagacgccgagcataaag < 1:886589‑M1/76‑18 (MQ=255) tATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAagacgccgagcataaag < 2:2998658‑M1/76‑18 (MQ=255) tATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAagacgccgagcataaag > 2:3290826‑M1/1‑59 (MQ=255) tATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAagacgccgagcataaag > 2:3870393‑M1/1‑59 (MQ=255) tATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAagacgccgagcataaag > 1:6579311‑M1/1‑59 (MQ=255) aTCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAagacgccgagcataaaga > 2:5344238‑M1/1‑58 (MQ=255) ccGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAagacgccgagcataaagagt < 2:1465143‑M1/76‑21 (MQ=255) ccGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAagacgccgagcataaagagt > 2:2667099‑M1/1‑56 (MQ=255) ccGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAagacgccgagcataaagagt > 2:7089994‑M1/1‑56 (MQ=255) cGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAagacgccgagcataaagagtg < 1:8044789‑M1/76‑22 (MQ=255) tGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAagacgccgagcataaagagtggggcgtt > 2:7331006‑M1/1‑48 (MQ=255) tGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAagacgccgagcataaagagtggggcgtt > 2:8065395‑M1/1‑48 (MQ=255) gCTTCGGAGCTAACCGTGATTCGGACCTTTTTTGATTTTCCCGTTTAagacgccgagcataaagagtggggcgttt < 2:5524663‑M1/76‑30 (MQ=255) cTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAagacgccgagcataaagagtggggcgtttg > 2:3055025‑M1/1‑46 (MQ=255) cGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAagacgccgagcataaagagtggggcgtttgcca < 2:3679184‑M1/76‑34 (MQ=255) cGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAagacgccgagcataaagagtggggcgtttgcca > 1:929010‑M1/1‑43 (MQ=255) ggAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAagacgccgagcataaagagtggggcgtttgccag < 1:1537174‑M1/76‑35 (MQ=255) ggAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAagacgccgagcataaagagtggggcgtttgccag > 1:2336327‑M1/1‑42 (MQ=255) gAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAagacgccgagcataaagagtggggcgtttgccagc < 2:417811‑M1/76‑36 (MQ=255) aGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAagacgccgagcataaagagtggggcgtttgccagca < 1:7203145‑M1/76‑37 (MQ=255) gCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAagacgccgagcataaagagtggggcgtttgccagcaa > 2:6655258‑M1/1‑39 (MQ=255) cTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAagacgccgagcataaagagtggggcgtttgccagcaag < 2:7286331‑M1/76‑39 (MQ=255) tAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAagacgccgagcataaagagtggggcgtttgccagcaagg > 1:1016763‑M1/1‑37 (MQ=255) tAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAagacgccgagcataaagagtggggcgtttgccagcaagg > 1:6543908‑M1/1‑37 (MQ=255) aaCCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAagacgccgagcataaagagtggggcgtttgccagcaagga < 1:7259575‑M1/76‑41 (MQ=255) aaCCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAagacgccgagcataaagagtggggcgtttgccagcaagga > 1:5046029‑M1/1‑36 (MQ=255) aaCCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAagacgccgagcataaagagtggggcgtttgccagcaagga < 2:4673868‑M1/76‑41 (MQ=255) aCCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAagacgccgagcataaagagtggggcgtttgccagcaaggag < 1:1760134‑M1/76‑42 (MQ=255) aCCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAagacgccgagcataaagagtggggcgtttgccagcaaggag < 2:7453802‑M1/76‑42 (MQ=255) aCCGTGATTCAGACCTTTTTTGATTTTCCCGTTTAagacgccgagcataaagagtggggcgtttgccagcaaggag < 2:3095909‑M1/76‑42 (MQ=255) ccGTGATTCAGACCTTTTTTGATTTTCCCGTTTAagacgccgagcataaagagtggggcgtttgccagcaaggaga < 1:2583642‑M1/76‑43 (MQ=255) cGTGATTCAGACCTTTTTTGATTTTCCCGTTTAagacgccgagcataaagagtggggcgtttgccagcaaggagag < 2:684571‑M1/76‑44 (MQ=255) gTGATTCAGACCTTTTTTGATTTTCCCGTTTAagacgccgagcataaagagtggggcgtttgccagcaaggagaga < 2:6249740‑M1/76‑45 (MQ=255) tGATTCAGACCTTTTTTGATTTTCCCGTTTAagacgccgagcataaagagtggggcgtttgccagcaaggagagat > 2:5462105‑M1/1‑31 (MQ=255) aTTCAGACCTTTTTTGATTTTCCCGTTTAagacgccgagcataaagagtggggcgtttgccagcaaggagagatcc < 1:5443078‑M1/76‑48 (MQ=255) aTTCAGACCTTTTTTGATTTTCCCGTTTAagacgccgagcataaagagtggggcgtttgccagcaaggagagatcc > 2:1197272‑M1/1‑29 (MQ=255) aTTCAGACCTTTTTTGATTTTCCCGTTTAagacgccgagcataaagagtggggcgtttgccagcaaggagagatcc < 1:4729855‑M1/76‑48 (MQ=255) ttCAGACCTTTTTTGATTTTCCCGTTTAagacgccgagcataaagagtggggcgtttgccagcaaggagagatcca < 2:6366010‑M1/76‑49 (MQ=255) ttCAGACCTTTTTTGATTTTCCCGTTTAagacgccgagcataaagagtggggcgtttgccagcaaggagagatcca < 2:4339057‑M1/76‑49 (MQ=255) tCAGACCTTTTTTGATTTTCCCGTTTAagacgccgagcataaagagtggggcgtttgccagcaaggagagatccaa > 2:4764025‑M1/1‑27 (MQ=255) tCAGACCGTTTTTGATTTTCCCGTTTAagacgccgagcataaagagtggggcgtttgccagcaaggagagatccaa < 2:3756328‑M1/76‑50 (MQ=255) cAGACCTTTTTTGATTTTCCCGTTTAagacgccgagcataaagagtggggcgtttgccagcaaggagagatccaac < 1:7803940‑M1/76‑51 (MQ=255) cAGACCTTTTTTGATTTTCCCGTTTAagacgccgagcataaagagtggggcgtttgccagcaaggagagatccaac > 2:4294365‑M1/1‑26 (MQ=255) gACCTTTTTTGATTTTCCCGTTTAagacgccgagcataaagagtggggcgtttgccagcaaggagagatccaactc > 2:7849367‑M1/1‑24 (MQ=255) gACCTTTTTTGATTTTCCCGTTTAagacgccgagcataaagagtggggcgtttgccagcaaggagagatccaactc < 2:7677046‑M1/76‑53 (MQ=255) aCCTTTTTTGATTTTCCCGTTTAagacgccgagcataaagagtggggcgtttgccagcaaggagagatccaactct < 1:4099190‑M1/76‑54 (MQ=255) ccTTTTTTGATTTTCCCGTTTAagacgccgagcataaagagtggggcgtttgccagcaaggagagatccaactctg < 1:773168‑M1/76‑55 (MQ=255) cTTTTTTGATTTTCCCGTTTAagacgccgagcataaagagtggggcgtttgccagcaaggagagatccaactctga > 1:5880557‑M1/1‑21 (MQ=255) ttttttGATTTTCCCGTTTAagacgccgagcataaagagtggggcgtttgccagcaaggagagatccaactctgaa > 2:3937513‑M1/1‑20 (MQ=255) ttttttGATTTTCCCGTTTAagacgccgagcataaagagtggggcgtttgccagcaaggagagatccaactctgaa > 1:1262597‑M1/1‑20 (MQ=255) tttGATTTTCCCGTTTAagacgccgagcataaagagtggggcgtttgccagcaaggagagatccaactctgaaaat < 2:5601119‑M1/76‑60 (MQ=255) tGATTTTCCCGTTTAagacgccgagcataaagagtggggcgtttgccagcaaggagagatccaactctgaaaatgc > 1:2244682‑M1/1‑15 (MQ=255) tGATTTTCCCGTTTAagacgccgagcataaagagtggggcgtttgccagcaaggagagatccaactctgaaaatgc > 1:5786623‑M1/1‑15 (MQ=255) ttttCCCGTTTAagacgccgagcataaagagtggggcgtttgccagcaaggagagatccaactctgaaaatgcttt < 1:3819201‑M1/76‑65 (MQ=255) ttttCCCGTTTAagacgccgagcataaagagtggggcgtttgccagcaaggagagatccaactctgaaaatgcttt > 1:5183115‑M1/1‑12 (MQ=255) tttCCCGTTTAagacgccgagcataaagagtggggcgtttgccagcaaggagagatccaactctgaaaatgctttg > 1:8178239‑M1/1‑11 (MQ=255) tttCCCGTTTAagacgccgagcataaagagtggggcgtttgccagcaaggagagatccaactctgaaaatgctttg < 1:3138290‑M1/76‑66 (MQ=255) ttCCCGTTTAagacgccgagcataaagagtggggcgtttgccagcaaggagagatccaactctgaaaatgctttga > 1:5086431‑M1/1‑10 (MQ=255) ttCCCGTTTAagacgccgagcataaagagtggggcgtttgccagcaaggagagatccaactctgaaaatgctttga < 2:759473‑M1/76‑67 (MQ=255) cccGTTTAagacgccgagcataaagagtggggcgtttgccagcaaggagagatccaactctgaaaatgctttgata > 1:1572494‑M1/1‑8 (MQ=255) cccGTTTAagacgccgagcataaagagtggggcgtttgccagcaaggagagatccaactctgaaaatgctttgata > 1:4923985‑M1/1‑8 (MQ=255) ccGTTTAagacgccgagcataaagagtggggcgtttgccagcaaggagagatccaactctgaaaatgctttgatat > 2:3163612‑M1/1‑7 (MQ=255) ccGTTTAagacgccgagcataaagagtggggcgtttgccagcaaggagagatccaactctgaaaatgctttgatat > 2:1897051‑M1/1‑7 (MQ=255) gTTTAagactccgagcataaagagtggggcgtttgccagcaaggagagatccaactctgaaaatgctttgatatgg < 2:1538092‑M1/76‑72 (MQ=255) gTTTAagacgccgagcataaagagtggggcgtttgccggcaaggagagatccaactctgaaaatgctttgatatgg > 2:1119942‑M1/1‑5 (MQ=255) gTTTAagacgccgagcataaagagtggggcgtttgccagcaaggagagatccaactctgaaaatgctttgatatgg < 2:7001045‑M1/76‑72 (MQ=255) gTTTAagacgccgagcataaagagtggggcgtttgccagcaaggagagatccaactctgaaaatgctttgatatgg < 1:3407507‑M1/76‑72 (MQ=255) gTTTAagacgccgagcataaagagtggggcgtttgccagcaaggagagatccaactctgaaaatgctttgatatgg > 2:2288209‑M1/1‑5 (MQ=255) tttAagacgccgagcataaagagtggggcgtttgccagcaaggagagatccaactctgaaaatgctttgatatgga < 2:2930050‑M1/76‑73 (MQ=255) ttAagacgccgagcataaagagtggggcgtttgccagcaaggagagatccaactctgaaaatgctttgatatggaa > 1:5986616‑M1/1‑3 (MQ=255) ttAagacgccgagcataaagagtggggcgtttgccagcaaggagagatccaactctgaaaatgctttgatatggaa < 2:2147784‑M1/76‑74 (MQ=255) tAagacgccgagcataaagagtggggcgtttgccagcaaggagagatccaactctgaaaatgctttgatatggaaa < 2:5012919‑M1/76‑75 (MQ=255) aagacgccgagcataaagagtggggcgtttgccagcaaggagagatccaactctgaaaatgctttgatatggaaaa < 2:6062274‑M1/76‑76 (MQ=255) | TTATTTATGGCTAACATTATCCGGCTTTTGCTTCGGAGCTAACCGTGATTCAGACCTTTTTTGATTTTCCCGTTTACTTCAAATTTTTCATCGGGTTATTTGCGCTGGTCAACCCGGTAGGGATTATTCCCGTCTTTATCAGCATGACCAG > REL606/1297347‑1297497 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |