| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 3,570,938 | IS150 (+) +4 bp | coding (139‑142/435 nt) | uspA → | universal stress global response regulator |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3570938 = | 3 (0.010) | 296 (1.230) | 116/148 | 0.1 | 98.9% | coding (139/435 nt) | uspA | universal stress global response regulator |
| ? | REL606 | = 3652533 | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region | |||||
| * | ? | REL606 | = 3570941 | 3 (0.010) | 371 (1.520) | 119/150 | 0.1 | 99.2% | coding (142/435 nt) | uspA | universal stress global response regulator |
| ? | REL606 | 3893554 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
Only 100 of 297 total aligned reads displayed.
GGTCAGCGCATGATGTGTCTCTTCTGAGATGCGTTTCTGCATATCACCCAGATTCACATCAATAAGCCCGGTGTAt‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3571012‑3570938‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGA < REL606/3652533‑3652459 GTCAGCGCATGATGTGTCTCTTCTGAGATGCGTTTCTGCATATCACCCAGATTCACATCAATAAGCCCGGTGTATG > 2:5723842/1‑76 GTCAGCGCATGATGTGTCTCTTCTGAGATGCGTTTCTGCATATCACCCAGATTCACATCAATAAGCCCGGTGTATG > 1:5954551/1‑76 GTCAGCGCATGATGTGTCTCTTCTGAGATGCGTTTCTGCATATCACCCAGATTCACATCAATAAGCCCGGTGTATG < 1:4065489/76‑1 TCAGCGCATGATGTGTCTCTTCTGAGATGCGTTTCTGCATATCACCCAGATTCACATCAATAAGCCCGGTGTATGT > 1:7147597/1‑76 CAGCGCATGATGTGTCTCTTCTGAGATGCGTTTCTGCATATCACCCAGATTCACATCAATAAGCCCGGTGTATGTA < 1:4743111/76‑1 CAGCGCATGATGTGTCTCTTCTGAGATGCGTTTCTGCATATCACCCAGATTCACATCAATAAGCCCGGTGTATGTA > 1:5589061/1‑76 CAGCGCATGATGTGTCTCTTCTGAGATGCGTTTCTGCATATCACCCAGATTCACATCAATAAGCCCGGTGTATGTA < 1:3878054/76‑1 CAGCGCATGATGTGTCTCTTCTGAGATGCGTTTCTGCATATCACCCAGATTCACATCAATAAGCCCGGTGTATGTA > 2:2325706/1‑76 CAGCGCATGATGTGTCTCTTCTGAGATGCGTTTCTGCATATCACCCAGATTCACATCAATAAGCCCGGTGTATGTA < 1:6833323/76‑1 GCGCATGATGTGTCTCTTCTGAGATGCGTTTCTGCATATCACCCAGATTCACATCAATAAGCCCGGTGTATGTACT < 2:4564593/76‑1 GCGCATGATGTGTCTCTTCTGAGATGCGTTTCTGCATATCACCCAGATTCACATCAATAAGCCCGGTGTATGTACT > 2:7251326/1‑76 GCGCATGATGTGTCTCTTCTGAGATGCGTTTCTGCATATCACCCAGATTCACATCAATAAGCCCGGTGTATGTACT < 1:1647120/76‑1 CGCATGATGTGTCTCTTCTGAGATGCGTTTCTGCATATCACCCAGATTCACATCAATAAGCCCGGTGTATGTACTG < 2:7680052/76‑1 GCATGATGTGTCTCTTCTGAGATGCGTTTCTGCATATCACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGA < 1:5036808/76‑1 CATGATGTGTCTCTTCTGAGATGCGTTTCTGCATATCACCCAGTTTAACATCATTAAGCCCGGGGAATGTCCTGAC > 2:3127382/1‑76 ATGATGTGTCTCTTCTGAGATGCGTTTCTGCATATCACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGACC > 2:6877615/1‑76 ATGATGTGTCTCTTCTGAGATGCGTTTCTGCATATCACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGACC > 1:177277/1‑76 GATGTGTCTCTTCTGAGATGCGTTTCTGCATATCACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGACCCC > 2:3315521/1‑76 GATGTGTCTCTTCTGAGATGCGTTTCTGCATATCACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGACCCC < 2:1729503/76‑1 ATGTGTCTCTTCTGAGATGCGTTTCTGCATATCACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGACCCCA < 2:3374740/76‑1 TGTGTCTCTTCTGAGATGCGTTTCTGCATATCACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGACCCCAA > 2:612393/1‑76 TGTGTCTCTTCTGAGATGCGTTTCTGCATATCACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGACCCCAA > 2:1367612/1‑76 TGTGGCTCTTCTGAGATGCGTTTCTGCATATCACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGACCCCAA < 2:1935254/76‑1 TGTCTCTTCTGAGATGCGTTTCTGCATATCACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGACCCCAAAA < 1:3787937/76‑1 GTCTCTTCTGAGATGCGTTTCTGCATATCACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGACCCCAAAAA < 2:3773370/76‑1 CTTCTGAGATGCGTTTCTGCATATCACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTG > 2:1102291/1‑76 TCTGAGATGCGTTTCTGCATATCACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGA < 1:5106286/76‑1 TCTGAGATGCGTTTCTGCATATCACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGA > 1:4453855/1‑76 TCTGAGATGCGTTTCTGCATATCACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGA > 2:5571449/1‑76 CTGAGATGCGTTTCTGCATATCACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGAC > 2:4506164/1‑76 TGAGATGCGTTTCTGCATATCACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGACA < 1:4262457/76‑1 AGATGCGTTTCTGCATATCACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGACAGT > 2:3202403/1‑76 AGATGCGTTTCTGCATATCACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGACAGT < 2:6645179/76‑1 GATGCGTTTCTGCATATCACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTT < 1:4835481/76‑1 GATGCGTTTCTGCATATCACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTT > 2:6253611/1‑76 ATGCGTTTCTGCATATCACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTA < 1:7426985/76‑1 ATGCGTTTCTGCATATCACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTA > 2:5201220/1‑76 ATGCGTTTCTGCATATCACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTA < 1:4894697/76‑1 ATGCGTTTCTGCATATCACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTA > 2:6396933/1‑76 TGCGTTTCTGCATATCACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTAA < 2:2412534/76‑1 GCGTTTCTGCATATCACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAA < 1:1123688/76‑1 CGTTTCTGCATATCACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAAC < 1:1443549/76‑1 GTTTCTGCATATCACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAACA < 1:2951381/76‑1 GTTTCTGCATATCACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAACA < 2:6562153/76‑1 TTTCTGCATATCACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAACAC < 1:3594438/76‑1 TTTCTGCATATCACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAACAC < 1:1988482/76‑1 TTTCTGCATATCACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAACAC > 1:5153213/1‑76 TTTCTGCATATCACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAACAC > 2:1498443/1‑76 TTCTGCATATCACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAACACG > 1:3674841/1‑76 TGCATATCACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGG > 1:1266713/1‑76 CATATCACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCA > 1:2637996/1‑76 ATATCACCCAGCTTCACATCAATAAGCCCGGTGTATGTACTGACCCCCCCCCGTTGGACAGTTAAACACGAGGCAT > 2:2661492/1‑76 ATATCACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCAT < 2:7459587/76‑1 ATATCACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCAT > 2:1278401/1‑76 TATCACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATA > 2:784747/1‑76 ATCACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATAT < 1:1053903/76‑1 ATCACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATAT < 1:3283223/76‑1 TCACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATA < 1:5391967/76‑1 TCACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATA < 2:3993533/76‑1 TCACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATA < 1:7230678/76‑1 CACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAG < 1:1603390/76‑1 CACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAG > 1:12973/1‑76 CACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAG < 1:5422233/76‑1 CACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAG > 1:6496120/1‑76 CACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAG < 1:6295729/76‑1 ACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGG > 2:4838570/1‑76 ACCCAGATTCACATCAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGG < 1:2450835/76‑1 CCAGATTCACATCAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTC > 1:3139612/1‑76 AGATTCACATCAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTG > 1:1836770/1‑76 GATTCACATCAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGA < 1:6406674/76‑1 TTCACATCAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATT < 2:4264649/76‑1 CACATCAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCC < 1:2147148/76‑1 CACATCAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCC > 1:661168/1‑76 ACATCAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGTTTCCa > 2:3920874/1‑75 TCAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATA > 1:1893634/1‑76 CAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATGGGTCTGATTCCGATAT > 2:1564705/1‑76 CAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATAT > 1:285513/1‑76 CAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATAT > 1:3557642/1‑76 CAATAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATAT < 2:2148587/76‑1 TAAGCCCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCA > 2:160669/1‑76 GCCCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATT < 1:7774489/76‑1 GCCCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATT < 2:6820132/76‑1 CCCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTG > 1:97170/1‑76 CCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGG > 1:452182/1‑76 CCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGG < 2:7110914/76‑1 CCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGG > 2:3712030/1‑76 CCGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGG < 2:3627523/76‑1 CGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGA > 2:7378727/1‑76 CGGTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGA > 1:6251100/1‑76 GGTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAG < 1:410257/76‑1 GGTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAACTGGAG < 1:6685602/76‑1 GTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGT < 2:4090365/76‑1 GTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGT > 1:767481/1‑76 GTGTATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGT > 2:758020/1‑76 GTATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCA > 1:2792793/1‑76 GTATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCA < 2:5988227/76‑1 TATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAG > 1:5717537/1‑76 ATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGA > 1:849852/1‑76 ATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGA < 2:5311602/76‑1 ATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGA > 2:5113044/1‑76 GGTCAGCGCATGATGTGTCTCTTCTGAGATGCGTTTCTGCATATCACCCAGATTCACATCAATAAGCCCGGTGTAt‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3571012‑3570938‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGA < REL606/3652533‑3652459 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |