| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 3,570,938 | IS150 (+) +4 bp | coding (139‑142/435 nt) | uspA → | universal stress global response regulator |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3570938 = | 3 (0.010) | 296 (1.230) | 116/148 | 0.1 | 98.9% | coding (139/435 nt) | uspA | universal stress global response regulator |
| ? | REL606 | = 3652533 | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region | |||||
| * | ? | REL606 | = 3570941 | 3 (0.010) | 371 (1.520) | 119/150 | 0.1 | 99.2% | coding (142/435 nt) | uspA | universal stress global response regulator |
| ? | REL606 | 3893554 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
Only 100 of 316 total aligned reads displayed.
TGCACCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAA > REL606/3893479‑3893627 | gCACCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTg < 1:7296417/76‑1 (MQ=255) gCACCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTg < 1:4132783/76‑1 (MQ=255) cACCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGt > 1:2642790/1‑76 (MQ=255) aCCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTa < 2:1307727/76‑1 (MQ=255) aGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTg < 1:7758067/76‑1 (MQ=255) gATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGc > 1:5204293/1‑76 (MQ=255) aTCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCa < 2:5121803/76‑1 (MQ=255) aTCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCa > 2:5453800/1‑76 (MQ=255) tCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCAc < 2:7789786/76‑1 (MQ=255) tCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCAc < 2:5784130/76‑1 (MQ=255) tCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCAc < 1:6564065/76‑1 (MQ=255) tCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCAc > 1:2788867/1‑76 (MQ=255) cAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCAcc > 1:7499374/1‑76 (MQ=255) aTTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCa > 1:7052760/1‑76 (MQ=255) ttGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCAtt < 1:4616366/76‑1 (MQ=255) ttGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCAtt > 1:544572/1‑76 (MQ=255) tGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCAttt > 1:849393/1‑76 (MQ=255) gAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCAtttt > 1:7401712/1‑76 (MQ=255) aaaTCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTttg < 2:5518623/76‑1 (MQ=255) aaTCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGGACTGTACTGCACCCATTttg > 2:5274064/1‑76 (MQ=255) aaTCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTttgt > 1:2025681/1‑76 (MQ=255) aaTCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTttgt > 2:635661/1‑76 (MQ=255) aaTCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTttgt > 2:105385/1‑76 (MQ=255) tCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTttgttg > 2:4145891/1‑76 (MQ=255) tCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTttgttg > 2:475363/1‑76 (MQ=255) cGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGAc < 1:2407453/76‑1 (MQ=255) gCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACg > 1:4204223/1‑76 (MQ=255) ccAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGa > 1:4682321/1‑76 (MQ=255) cAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGAt > 1:4491256/1‑76 (MQ=255) cAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGAt < 2:1505210/76‑1 (MQ=255) cAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGAt > 2:5083756/1‑76 (MQ=255) cAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGAt < 1:68371/76‑1 (MQ=255) cAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGAt > 1:628546/1‑76 (MQ=255) aaaCAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATg < 1:2582947/76‑1 (MQ=255) aaaCAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATg < 2:5597692/76‑1 (MQ=255) aaaCAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATg < 2:5637461/76‑1 (MQ=255) aaCAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATGa < 2:5024269/76‑1 (MQ=255) aaCAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATGa < 1:1298578/76‑1 (MQ=255) aCAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATGaa > 2:321599/1‑76 (MQ=255) cAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATGaaa < 2:7864346/76‑1 (MQ=255) aGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATGAAAt > 2:2940395/1‑76 (MQ=255) gggTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATg > 1:3445282/1‑76 (MQ=255) gTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATGGa < 1:2906297/76‑1 (MQ=255) ttATCGAACTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATGGaa < 2:1186527/76‑1 (MQ=255) tATCGAACTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAAt < 2:5902982/76‑1 (MQ=255) tATCGAACTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAAt > 2:4595793/1‑76 (MQ=255) tCGAACTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAg > 1:4997178/1‑76 (MQ=255) cGAACTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGc < 2:2634639/76‑1 (MQ=255) gAACTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGcc < 2:3742764/76‑1 (MQ=255) aaCTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGccc < 1:6874921/76‑1 (MQ=255) aaCTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGccc < 1:538494/76‑1 (MQ=255) aCTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGcccc > 2:3928338/1‑76 (MQ=255) cTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCt < 2:6252958/76‑1 (MQ=255) cTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCt > 1:5691590/1‑76 (MQ=255) cTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCt < 2:1693191/76‑1 (MQ=255) tGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTa > 2:818996/1‑76 (MQ=255) gggTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTaa < 2:752807/76‑1 (MQ=255) gggTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTaa > 2:3603189/1‑76 (MQ=255) gTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAata < 1:7615598/76‑1 (MQ=255) gTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAata < 1:6697754/76‑1 (MQ=255) tACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAatat < 2:199655/76‑1 (MQ=255) tACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAatat < 1:73266/76‑1 (MQ=255) aCTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATg < 1:1014473/76‑1 (MQ=255) aCTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATg > 2:7555017/1‑76 (MQ=255) aCTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATg > 2:6803031/1‑76 (MQ=255) aCTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATg < 1:4852874/76‑1 (MQ=255) cTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGt < 1:1231379/76‑1 (MQ=255) cAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCa < 1:111369/76‑1 (MQ=255) cAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCa < 2:6019224/76‑1 (MQ=255) cAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCa > 1:451761/1‑76 (MQ=255) cAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCa < 1:5074652/76‑1 (MQ=255) aGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCaa > 1:4031389/1‑76 (MQ=255) cGAAATCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGcc > 1:3559986/1‑76 (MQ=255) aaaTCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCaa < 1:2843311/76‑1 (MQ=255) aTCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCaaaa < 2:6397655/76‑1 (MQ=255) aTCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCaaaa < 1:1047528/76‑1 (MQ=255) tCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAAt < 2:3366675/76‑1 (MQ=255) tCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAAt < 2:2439905/76‑1 (MQ=255) cTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATa > 1:3902698/1‑76 (MQ=255) cTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATa < 1:3721954/76‑1 (MQ=255) cTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATa < 1:1861530/76‑1 (MQ=255) tAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATAc < 1:6035770/76‑1 (MQ=255) tAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATAc < 1:6420900/76‑1 (MQ=255) aCGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATAccc < 2:1452206/76‑1 (MQ=255) gCCA‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCtt > 2:3516266/1‑76 (MQ=39) ccA‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCttt < 1:1711915/76‑1 (MQ=38) cA‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCtttt > 2:7014449/1‑76 (MQ=35) taCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGa > 2:3445271/2‑76 (MQ=14) gACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGa > 2:1821764/1‑76 (MQ=32) gACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGa > 2:2253314/1‑76 (MQ=32) gACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGa > 2:2534867/1‑76 (MQ=32) gACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGa > 1:7824932/1‑76 (MQ=32) gACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGa > 2:3055361/1‑76 (MQ=32) gACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGa > 1:1819268/1‑76 (MQ=32) gACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGa > 1:3287353/1‑76 (MQ=32) gACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGa > 1:3612412/1‑76 (MQ=32) gACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGa > 1:4368731/1‑76 (MQ=32) gACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGa > 2:4291119/1‑76 (MQ=32) aCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGaa < 2:6556912/76‑1 (MQ=31) aCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGaa < 1:1458840/76‑1 (MQ=31) | TGCACCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCA‑GACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAA > REL606/3893479‑3893627 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |