| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | REL606 | 3,014,099 | (ACAGGC)3→4 | coding (680/1137 nt) | ECB_02815 → | Capsule polysaccharide export inner‑membrane protein kpsE |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3014081 = | 20 (0.090) | 215 (1.210) | 96/124 | 0.0 | 96.3% | coding (662/1137 nt) | ECB_02815 | Capsule polysaccharide export inner‑membrane protein kpsE |
| ? | REL606 | = 3014086 | 0 (0.000) | coding (667/1137 nt) | ECB_02815 | Capsule polysaccharide export inner‑membrane protein kpsE | |||||
Only 100 of 324 total aligned reads displayed.
AGCAAGTTCCGCAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3014168‑3014081‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctgtgcctgtgCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTG < REL606/3014086‑3014012 CAAGTTCCGCAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCC > 2:5318915/1‑76 CAAGTTCCGCAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCC > 1:3899258/1‑76 CAAGTTCCGCAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCC > 1:21063/1‑76 AAGCTCCGCAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCCGCGTATTCACTAACGTGCTCGCCGCCTGTGCCT > 2:6341891/1‑76 AGTTCCGCAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTG > 1:2208703/1‑76 TTCCGCAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTG > 2:2070633/1‑76 TTCCGCAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTG > 1:2372563/1‑76 TCCGCAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGC > 1:3815843/1‑76 GCAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTG > 2:1606226/1‑76 CAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGT > 1:5321503/1‑76 CAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGT > 2:4567370/1‑76 AGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTG > 1:3376837/1‑76 AGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTG > 2:4157325/1‑76 GTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCC > 2:3781843/1‑76 GTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCC > 2:1674945/1‑76 TCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCT > 1:5455646/1‑76 CCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTG < 2:5122649/76‑1 GCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTG > 2:2186899/1‑76 ctcCCATCGGGATCTCCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGG < 2:3123955/73‑1 CTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGG > 1:1352444/1‑76 TCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGAT > 1:1698630/1‑76 TCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGAT > 2:1920646/1‑76 TCCATCGGGATCTTCTGGCCAATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGAT < 2:1418111/76‑1 TCCATCGGGATCTTCGGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGAT < 1:6309968/76‑1 TCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAG > 1:2162513/1‑76 TCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAG > 1:6229918/1‑76 TCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAG < 2:791206/76‑1 CTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGA < 1:5255174/76‑1 CTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGA < 1:5061372/76‑1 TGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAA < 2:2487332/76‑1 GGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAAC > 1:6782199/1‑76 ATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGT > 1:3505541/1‑76 ATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGT > 2:6601632/1‑76 TCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTT < 2:2934730/76‑1 CTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTG < 1:1876448/76‑1 TCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTT > 1:4514914/1‑76 TCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTT < 1:2958987/76‑1 TGGCCCATCAGGTTATTCACTAACGTCCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGT < 1:1169171/76‑1 cCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTG < 2:3542355/75‑1 cCCCACCAGCGTATTCACTAACGTGCTCGCCGCCTGTACCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTG < 2:1831544/75‑1 CCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGT < 1:4284000/76‑1 CCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGT > 2:5751242/1‑76 CATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCT < 2:2567563/76‑1 TCAGCGTTTTCACTAACGTGCTCGCCGCCTGTGCCTCTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTG < 2:4334678/76‑1 TCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTG < 1:3749999/76‑1 AGCGTATTCAGTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGAT > 1:5439993/1‑76 GTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAG > 1:6946210/1‑76 GTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAG > 1:488409/1‑76 GTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAG > 1:6428097/1‑76 ATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAG < 1:1989004/76‑1 TTCACTATCGTGCTCGCCGCCTGTGCCTGTTCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGA < 1:1009294/76‑1 TTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGA > 1:6550503/1‑76 TCACTACCGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAG < 1:6139692/76‑1 CACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGC < 1:497036/76‑1 CACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGC > 1:5585832/1‑76 acaAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCA < 1:2840816/73‑1 CTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAA > 1:2552761/1‑76 CTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAA > 2:257911/1‑76 CTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAA > 2:4772683/1‑76 CTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAA > 2:5421826/1‑76 AACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATT < 2:6844401/76‑1 AACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATT > 1:1607124/1‑76 ACGTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTC > 1:6640508/1‑76 GTGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGGTCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCG < 1:3291628/76‑1 TGCTCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGC > 2:445831/1‑76 GCTCGCCTCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCT < 1:4048370/76‑1 tgGCCGCGTGTGCCTGTGCCTGTGCCTGTGGATTCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTT < 2:5543491/74‑1 TCGCCGCCTTTGCCTGTACCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTT < 1:4189566/76‑1 TCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTT < 1:5743179/76‑1 TCGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTT < 1:890894/76‑1 CGCCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTG < 1:2470902/76‑1 CCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCT > 1:3570323/1‑76 CCGCCTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCT > 2:3687109/1‑76 CTGTGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCG > 2:1001877/1‑76 TGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCC > 2:2790386/1‑76 GCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCA < 2:3199928/76‑1 GCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCA < 2:4647286/76‑1 GCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCA < 1:5868356/76‑1 CCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAG < 1:4413754/76‑1 CTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGA > 2:396503/1‑76 CTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGA > 1:604735/1‑76 TGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGAC > 2:2666100/1‑76 TGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGAC > 2:6712956/1‑76 TGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGAC > 2:4904781/1‑76 TGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGAC < 1:2723879/76‑1 GTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTTGCGTCCAGACG > 1:2316038/1‑76 GTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACG < 2:1255912/76‑1 GTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACG < 2:1063396/76‑1 GCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCT < 2:6947896/76‑1 CCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTG < 2:829620/76‑1 CTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGG < 2:5836693/76‑1 CTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGG > 2:5904388/1‑76 CTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGG > 2:6190760/1‑76 CTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGG < 2:4090107/76‑1 TGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGC > 1:6824697/1‑76 GTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCG < 1:510119/76‑1 GTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCG < 2:2247314/76‑1 GTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCG > 2:2451581/1‑76 GTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCG > 1:4600826/1‑76 GCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTG < 2:3377377/76‑1 AGCAAGTTCCGCAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3014168‑3014081‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctgtgcctgtgCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTG < REL606/3014086‑3014012 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |