| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | REL606 | 3,014,099 | (ACAGGC)3→4 | coding (680/1137 nt) | ECB_02815 → | Capsule polysaccharide export inner‑membrane protein kpsE |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3014081 = | 20 (0.090) | 215 (1.210) | 96/124 | 0.0 | 96.3% | coding (662/1137 nt) | ECB_02815 | Capsule polysaccharide export inner‑membrane protein kpsE |
| ? | REL606 | = 3014086 | 0 (0.000) | coding (667/1137 nt) | ECB_02815 | Capsule polysaccharide export inner‑membrane protein kpsE | |||||
Only 100 of 575 total aligned reads displayed.
AAAAGGCACGCCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAATACGCTGATGGGCCAGAAGATCCAGATGGAAGCGGACCT > REL606/3014006‑3014156 | acgccagcgtctggacgccagcaaagcggaattgctctcttatcaagacaacaacaacgttctggatccacaggca < 2:5867978‑M1/2‑1 (MQ=255) acgccagcgtctggacgccagcaaagcggaattgctctcttatcaagacaacaacaacgttctggatccacaggca < 2:6449110‑M1/2‑1 (MQ=255) cgccagcgtctggacgccagcaaagcggaattgctctcttatcaagacaacaacaacgttctggatccacaggcac > 2:2451581‑M1/74‑76 (MQ=255) aaGGCACGCCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcac > 2:1710238/1‑76 (MQ=255) gccagcgtctggacgccagcaaagcggaattgctctcttatcaagacaacaacaacgttctggatccacaggcaca > 1:5985888‑M1/73‑76 (MQ=255) aGGCACGCCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcaca > 1:5191465/1‑76 (MQ=255) ggCACGCCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTACCAAGACAACAACAACGTTCTGGATCcacag < 2:1137843/76‑1 (MQ=255) ccagcgtctggacgccagcaaagcggaattgctctcttatcaagacaacaacaacgttctggatccacaggcacag > 2:6937646‑M1/72‑76 (MQ=255) ccagcgtctggacgccagcaaagcggaattgctctcttatcaagacaacaacaacgttctggatccacaggcacag > 2:5684043‑M1/72‑76 (MQ=255) ccagcgtctggacgccagcaaagcggaattgctctcttatcaagacaacaacaacgttctggatccacaggcacag < 2:4090107‑M1/5‑1 (MQ=255) gCACGCCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacagg < 1:2833359/76‑1 (MQ=255) cagcgtctggacgccagcaaagcggaattgctctcttatcaagacaacaacaacgttctggatccacaggcacagg > 1:6163106‑M1/71‑76 (MQ=255) cagcgtctggacgccagcaaagcggaattgctctcttatcaagacaacaacaacgttctggatccacaggcacagg < 1:99775‑M1/6‑1 (MQ=255) cACGCCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCCACAGGc > 1:2423778‑M2/1‑75 (MQ=255) cgtctggacgccagcaaagcggaattgctctcttatcaagacaacaacaacgttctggatccacaggcacaggcac < 2:1054911‑M1/9‑1 (MQ=255) cGCCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCCACAGGcac > 1:4600826‑M2/1‑73 (MQ=255) gtctggacgccagcaaagcggaattgctctcttatcaagacaacaacaacgttctggatccacaggcacaggcaca < 1:2723879‑M1/10‑1 (MQ=255) gtctggacgccagcaaagcggaattgctctcttatcaagacaacaacaacgttctggatccacaggcacaggcaca > 2:2666100‑M1/67‑76 (MQ=255) tctggacgccagcaaagcggaattgctctcttatcaagacaacaacaacgttctggatccacaggcacaggcacag > 2:396503‑M1/66‑76 (MQ=255) ccAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCCACAGGcacag > 2:6190760‑M2/1‑71 (MQ=255) ctggacgccagcaaagcggaattgctctcttatcaagacaacaacaacgttctggatccacaggcacaggcacagg < 2:698682‑M1/12‑1 (MQ=255) ctggacgccagcaaagcggaattgctctcttatcaagacaacaacaacgttctggatccacaggcacaggcacagg < 2:5490574‑M1/12‑1 (MQ=255) cAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCCACAGGcacagg < 1:251541‑M2/76‑7 (MQ=255) ggacgccagcaaagcggaattgctctcttatcaagacaacaacaacgttctggatccacaggcacaggcacaggca > 2:5363425‑M1/63‑76 (MQ=255) gCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCCACAGGcacaggca < 1:6896375‑M2/76‑9 (MQ=255) cGTCTGGACGCAAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCCACAGGcacaggcac > 1:2316038‑M2/1‑67 (MQ=255) gTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCCACAGGcacaggcaca < 2:1860217‑M2/76‑11 (MQ=255) gTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCCACAGGcacaggcaca < 1:2184577‑M2/76‑11 (MQ=255) gTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCCACAGGcacaggcaca > 1:5338180‑M2/1‑66 (MQ=255) acgccagcaaagcggaattgctctcttatcaagacaacaacaacgttctggatccacaggcacaggcacaggcaca > 1:5065229‑M1/61‑76 (MQ=255) cgccagcaaagcggaattgctctcttatcaagacaacaacaacgttctggatccacaggcacaggcacaggcacag > 1:6278062‑M1/60‑76 (MQ=255) cgccagcaaagcggaattgctctcttatcaagacaacaacaacgttctggatccacaggcacaggcacaggcacag > 1:4429636‑M1/60‑76 (MQ=255) gccagcaaagcggaattgctctcttatcaagacaacaacaacgttctggatccacaggcacaggcacaggcacagg > 1:6687628‑M1/59‑76 (MQ=255) gccagcaaagcggaattgctctcttatcaagacaacaacaacgttctggatccacaggcacaggcacaggcacagg > 1:3368879‑M1/59‑76 (MQ=255) agcaaagcggaattgctctcttatcaagacaacaacaacgttctggatccacaggCACAGGCACAGGCACAggcgg > 2:3687109‑M1/56‑76 (MQ=255) ccAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCCACAGGcacaggcacaggcacaggc < 1:547793‑M2/76‑20 (MQ=255) aagctgaattgctctcttatcaagacaacaacagcgttctggatccacaggCACAGGCACAGGCACAGGCGGCGAg > 1:3757950‑M1/52‑76 (MQ=255) aagcggaattgctctcttatcaagacaacaacaacgttctggatccacaggCACAGGCACAGGCACAGGCGGCGAg > 2:143223‑M1/52‑76 (MQ=255) agcggaattgctctcttatcaagacaacaacaacgttctggatccacaggCACAGGCACAGGCACAGGAGGCGAGc < 1:4048370‑M1/26‑1 (MQ=255) gcggaattgctctcttatcaagacaacaacaacgttctggatccacaggCACAGGCACAGGCACAGGCGGCGAGCa > 2:445831‑M1/50‑76 (MQ=255) gaattgctctcttatcaagacaacaacaacgttctggatccacaggCACAGGCACAGGCACAGGCGGCGAGCACGt < 1:732857‑M1/30‑1 (MQ=255) aaaGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCCACAGGcacaggcacaggcacaggcggcga < 1:4355940‑M2/76‑25 (MQ=255) aattgctctcttatcaagacaacaacaacgttctggatccacaggCACAGGCACAGGCACAGGCGGCGAGCACGtt < 2:6844401‑M1/31‑1 (MQ=255) aaGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCCACAGGcacaggcacaggcacaggcggcgag < 2:3235079‑M2/76‑26 (MQ=255) ttgctctcttatcaagacaacaacaacgttctggatccacaggCACAGGCACAGGCACAGGCGGCGAGCACGTTAg > 1:2552761‑M1/44‑76 (MQ=255) ctctcttatcaagacaacaacaacgttctggatccacaggCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGa > 2:6611362‑M1/41‑76 (MQ=255) tctcttatcaagacaacaacaacgttctggatccacaggCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGaa > 1:6080098‑M1/40‑76 (MQ=255) tctcttatcaagacaacaacaacgttctggatccacaggCACAGGAACAGGCACAGGCGGCGAGCACGATAGTGaa < 1:1009294‑M1/37‑1 (MQ=255) aaTTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCCACAGGcacaggcacaggcacaggcggcgagcacgtt > 1:1607124‑M2/1‑45 (MQ=255) ctcttatcaagacaacaacaacgttctggatccacaggCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAAt > 1:32286‑M1/39‑76 (MQ=255) aTTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCCACAGGcacaggcacaggcacaggcggcgagcacgtta > 2:2756145‑M2/1‑44 (MQ=255) ttGCTCTCTTATCAAGACAACAACAACGTTCTGGATCCACAGGcacaggcacaggcacaggcggcgagcacgttag > 2:257911‑M2/1‑43 (MQ=255) cttatcaagacaacaacaacgttctggatccacaggCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAATAc > 2:84693‑M1/37‑76 (MQ=255) gCTCTCTTATCAAGACAACAACAACGTTCTGGATCCACAGGcacaggcacaggcacaggcggcgagcacgttagtg < 1:497036‑M2/76‑36 (MQ=255) ctctctTATCAAGACAACAACAACGTTCTGGATCCACAGGcacaggcacaggcacaggcggcgagcacgttagtga < 1:3451089‑M2/76‑37 (MQ=255) tctctTATCAAGACAACAACAACGTTCTGGATCCACAGGcacaggcacaggcacaggcggcgagcacgttagtgaa < 1:413830‑M2/76‑38 (MQ=255) tcaagacaacaacaacgttctggatccacaggCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAATACGCTg > 1:5443998‑M1/33‑76 (MQ=255) ctctTATCAAGACAACAACAACGTTCTGGATCCACAGGcacaggcacaggcacaggcggcgagcacgttagtgaat > 2:4765383‑M2/1‑38 (MQ=255) tctTATCAAGACAACAACAACGTTCTGGATCCACAGGcacaggcacaggcacaggcggcgagcacgttagtgaata > 1:2057575‑M2/1‑37 (MQ=255) ctTATCAAGACAACAACAACGTTCTGGATCCACAGGcacaggcacaggcacaggcggcgagcacgttagtgaatac > 1:6612648‑M2/1‑36 (MQ=255) ctTATCAAGACAACAACAACGTTCTGGATCCACAGGcacaggcacaggcacaggcggcgagcacgttagtgaatac > 1:488409‑M2/1‑36 (MQ=255) ctTATCAAGACAACAACAACGTTCTGGATCCACAGGcacaggcacaggcacaggcggcgagcacgttagtgaatac < 2:2211157‑M2/76‑41 (MQ=255) ctTATCAAGACAACAACAACGTTCTGGATCCACAGGcacaggcacaggcacaggcggcgagcacgttagtgaatac > 1:6428097‑M2/1‑36 (MQ=255) tATCAAGACAACAACAACGTTCTGGATCCACAGGcacaggcacaggcacaggcggcgagcacgttagtgaatacgc < 2:4620120‑M2/76‑43 (MQ=255) tATCAAGACAACAACAACGTTCTGGATCCACAGGcacaggcacaggcacaggcggcgagcacgttagtgaatacgc < 2:4832529‑M2/76‑43 (MQ=255) acaacaacaacgttctggatccacaggCACAGGCACAGGCACAGGCGGCGCGCAAGGTAGGGAATAGCCTCATggg < 2:6742501‑M1/49‑1 (MQ=255) cAAGACAACAACAACGTTCTGGATCCACAGGcacaggcagaggcacaggcggcgagcacgttagtgaaaacgctga < 2:4334678‑M2/76‑46 (MQ=255) aacaacaacgttctggatccacaggCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAATACGCTGATGGGcc > 2:3187638‑M1/26‑76 (MQ=255) aGACAACAACAACGTTCTGGATCCACAGGcacaggcacaggcacaggcggcgagcacgttagtgaatacgctgatg < 2:2567563‑M2/76‑48 (MQ=255) caacgttctggatccacaggCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAATACGCTGATGGGCCagaag < 1:1876448‑M1/56‑1 (MQ=255) aacaacGTTCTGGATCCACAGGcacaggcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccaga < 1:2958987‑M2/76‑55 (MQ=255) aacaacGTTCTGGATCCACAGGcacaggcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccaga > 1:4514914‑M2/1‑22 (MQ=255) ttctggatccacaggCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAATACGCTGATGGGCCAGAAGATCCa > 2:2331876‑M1/16‑76 (MQ=255) ctggatccacaggCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAATACGCTGATGGGGCAGAAGATTCAGa < 2:4185843‑M1/63‑1 (MQ=255) ctggatccacaggCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAATACGCTGATGGGCCAGAAGATCCAGa > 1:2162513‑M1/14‑76 (MQ=255) ctggatccacaggCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAATACGCTGATGGGCCAGAAGATCCAGa > 1:3872658‑M1/14‑76 (MQ=255) aacGTTCTGGATCCACAGGcacaggcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaaga < 2:2934730‑M2/76‑58 (MQ=255) tggagccacaggCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAATACGCTGATGGGCCAGAAGATCCAGAt > 1:3627512‑M1/13‑76 (MQ=255) gTTCTGGATCCACAGGcacaggcacaggcacaggcggcgagcacgttagtgaatacgctgatgggcccgaagatcc < 1:6547779‑M2/76‑61 (MQ=255) ttCTGGATCCACAGGcacaggcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaagatcca < 2:2487332‑M2/76‑62 (MQ=255) atccacaggCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAATACGCTGATGGGCCAGAAGATCCAGATGGa > 2:603123‑M1/10‑76 (MQ=255) tCTGGATCCACAGGcacaggcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaagatccag < 1:5255174‑M2/76‑63 (MQ=255) ccacaggCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAATACGCTGATGGGCCAGGAGATCCCgatgggag < 2:3123955‑M1/69‑4 (MQ=255) ccacaggCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAATACGCTGATGGGCCAGAAGATCCAGATGGAAg > 1:5628868‑M1/8‑76 (MQ=255) ccacaggCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAATACGCTGATGGGCCAGAAGATCCAGATGGAAg > 1:1352444‑M1/8‑76 (MQ=255) tGGATCCACAGGcacaggcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaagatccagat > 1:3561800‑M2/1‑12 (MQ=255) cacaggCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAATAAGCTGATGGGCCAGAAGATCCAGATGGAAGc < 2:5751593‑M1/70‑1 (MQ=255) ggATCCACAGGcacaggcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaagatccagatg > 1:1093796‑M2/1‑11 (MQ=255) ggATCCACAGGcacaggcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaagatccagatg > 1:1964220‑M2/1‑11 (MQ=255) aggCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAATACGCTGATGGGCCAGAAGATCCAGATGGAAGCGGa < 2:2143273‑M1/73‑1 (MQ=255) aTCCACAGGcacaggcacaggcacaggcggcgagcacgttagtgaatacgctgatgggcccgaagatcccgatgga < 1:6309968‑M2/76‑68 (MQ=255) aTCCACAGGcacaggcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaagatccagatgga < 2:5063326‑M2/76‑68 (MQ=255) aTCCACAGGcacaggcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaagatccagatgga > 2:1920646‑M2/1‑9 (MQ=255) aTCCACAGGcacaggcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaagatccagatgga > 1:1698630‑M2/1‑9 (MQ=255) aTCCACAGGcacaggcacaggcacaggcggcgagcacgttagtgaatacgccgatgggccagaagatccagatgga < 2:3425183‑M2/76‑68 (MQ=255) ggCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAATACGCTGATGGGCCAGAAGATCCAGATGGAAGCGGAc > 2:3781843‑M1/3‑76 (MQ=255) ggCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAATACGCTGATGGGCCAGAAGATCCAGATGGAAGCGGAc > 1:6811837‑M1/3‑76 (MQ=255) gCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAATACGCTGATGGGCCAGAAGATTCAGATGGAAGCGGAcc < 2:1374712‑M1/75‑1 (MQ=255) CACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAATACGCTGATGGGCCAGAAGATCCAGATGGAAGCGGACCt > 1:5836693‑M1/1‑76 (MQ=255) CACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAATACGCTGATGGGCCAGAAGATCCAGATGGAAGCGGACCt > 1:4204431‑M1/1‑76 (MQ=255) | AAAAGGCACGCCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAATACGCTGATGGGCCAGAAGATCCAGATGGAAGCGGACCT > REL606/3014006‑3014156 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |