| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 664687 | 0 (0.000) | 121 (0.790) | 71/144 | 0.9 | 98.8% | intergenic (‑78/‑48) | gltL/insJ‑2 | ATP‑binding protein of glutamate/aspartate transport system; b0652_1/IS150 hypothetical protein |
| ? | REL606 | 666134 = | 3 (0.020) | pseudogene (354/387 nt) | gltL | ATP‑binding protein of glutamate/aspartate transport system; b0652_1 | |||||
Only 100 of 134 total aligned reads displayed.
ACGCTGCTGCTGACCGCCGGAAAGCTGCGCCGGAAACTTATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/664610‑664687‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tttCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAGGTTTTCGATAAT > REL606/666134‑666208 ACGCTGCTGCTGACCGCCGGAAAGCTGCGCCGGAAACTTATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGT > 2:1206451/1‑76 CGCTGCTGCTGACCGCCGGAAAGCTGCGCCGGAAACTTATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTT < 2:1344741/76‑1 CGCTGCTGCTGACCGCCGGAAAGCTGCGCCGGAAACTTATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTT > 2:4478231/1‑76 GCTGCTGCTGACCGCCGGAAAGCTGCGCCGGAAACTTATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTTT < 2:4744518/76‑1 GCTGCTGCTGACCGCCGGAAAGCTGCGCCGGAAACTTATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTTT < 2:4166492/76‑1 TGCTGCTGACCGCCGGAAAGCTGCGCCGGAAACTTATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTTTCA < 2:1642257/76‑1 TGCTGCTGACCGCCGGAAAGCTGCGCCGGAAACTTATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTTTCA < 2:4914936/76‑1 GCTGCTGACCGCCGGAAAGCTGCGCCGGAAACTTATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTTTCAG < 2:4005408/76‑1 GCTGCTGACCGCCGGAAAGCTGCGCCGGAAACTTATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGGTTCAG > 1:732294/1‑76 CTGCTGACCGCCGGAAAGCTGCGCCGGAAACTTATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTTTCAGG > 1:3018164/1‑76 TGCTGACCGCCGGAAAGCTGCGCCGGAAACTTATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTTTCAGGG > 2:2310564/1‑76 GCTGACCGCCGGAAAGCTGCGCCGGAAACTTATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTTTCAGGGC < 1:3435245/76‑1 GCTGACCGCCGGAAAGCTGCGCCGGAAACTTATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTTTCAGGGC > 1:1819955/1‑76 TGACCGCCGGAAAGCTGCGCCGGAAACTTATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTTTCAGGGCTT < 2:2554431/76‑1 TGACCGCCGGAAAGCTGCGCCGGAAACTTATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTTTCAGGGCTT > 2:350078/1‑76 TGACCGCCGGAAAGCTGCGCCGGAAACTTATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGATTCAGGGCat > 2:2556206/1‑74 GACCTCCGGAAAGCTGCGCCGGAAACTTATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTTTCAGGGCTTT < 1:669167/76‑1 GACCGCCGGAAAGCTGCGCCGGAAACTTATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTTTCAGGGCTTT > 2:2791130/1‑76 GACCGCCGGAAAGCTGCGCCGGAAACTTATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTTTCAGGGCTTT < 2:4220113/76‑1 CCGCCGGAAAGCTGCGCCGGAAACTTATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTTTCAGGGCTTTTT < 1:2942690/76‑1 CCGCCGGAAAGCTGCGCCGGAAACTTATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTTTCAGGGCTTTTT < 2:4011415/76‑1 CCGCCGGAAAGCTGCGCCGGAAACTTATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTTTCAGGGCTTTTT < 1:1154933/76‑1 CGCCGGAAAGCTGCGCCGGAAACTTATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTTTCAGGGCTTTTTC < 2:4964615/76‑1 CGCCGGAAAGCTGCGCCGGAAACTTATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTTTCAGGGCTTTTTC > 1:4953717/1‑76 CGCCGGAAAGCTGCGCCGGAAACTTATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTTTCAGGGCTTTTTC < 2:1632194/76‑1 CCGGAAAGCTGCGCCGGAAACTTATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTTTCAGGGCTTTTTCAC < 1:2961106/76‑1 CCGGAAAGCTGCGCCGGAAACTTATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTTTCAGGGCTTTTTCAC < 2:909794/76‑1 CGGAAAGCTGCGCCGGAAACTTATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTTTCAGGGCTTTTTCACG < 1:323170/76‑1 GGAAAGCTGCGCCGGAAACTTATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTTTCAGGGCTTTTTCACGA > 1:4565507/1‑76 GGAAAGCTGCGCCGGAAACTTATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTTTCAGGGCTTTTTCACGA > 2:3744441/1‑76 AAAGCTGCGCCGGAAACTTATTGGCGTGAGCAGAAAGTCCGACACGCTCCAGCAGTTTCAGGGCTTTTTTACGAGC > 1:3621281/1‑76 AAAGCTGCGCCGGAAACTTATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTTTCAGGGCTTTTTCACGAGC < 1:312801/76‑1 AAAGCTGCGCCGGAAACTTATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTTTCAGGGCTTTTTCACGAGC > 1:4060784/1‑76 AAAGCTGCGCCGGAAACTTATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTTTCAGGGCTTTTTCACGAGC > 1:1741186/1‑76 AAAGCTGCGCCGGAAACTTATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTTTCAGGGCTTTTTCACGAGC > 1:1624335/1‑76 AAAGCTGCGCCGGAAACTTATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTTTCAGGGCTTTTTCACGAGC < 1:1171422/76‑1 AAGCTGCGCCGGAAACTTATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTTTCAGGGCTTTTTCACGAGCC < 2:3621546/76‑1 AAGCTGCGCCGGAAACTTATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTTTCAGGGCTTTTTCACGAGCC > 2:3285890/1‑76 AGCTGCGCCGGAAACTTATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTTTCAGGGCTTTTTCACGAGCCG > 2:3608122/1‑76 GCGCCGGAAACTTATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTTTCAGGGCTTTTTCACGAGCCGGCGC > 2:551311/1‑76 CGGAAACTTATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTTTCAGGGCTTTTTCACGAGCCGGCGCTTTA > 1:849182/1‑76 CGGAAACTTATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTTTCAGGGCTTTTTCACGAGCCGGCGCTTTA > 2:3327379/1‑76 GGAAACTTATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTTTCAGGGCTTTTTCACGAGCCGGCGCTTTAT > 2:2523935/1‑76 GGAAACTTATGGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTTTCAGGGCTTTTTCACGAGCCGGCGCTTTAT < 2:2915806/76‑1 GGAAACTTATGGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTTTCAGGGCTTTTTCACGAGCCGGCGCTTTAT < 2:4701810/76‑1 aAAACTTATGGGCGTGAGCAGAAACCCCGACACGCTCCAGCATTTTCAGGTCTTTTTCACGAGCCGGCGCTTTATC < 2:4434371/75‑1 AAATTTATGGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCG < 2:3937085/76‑1 AAACTTATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCG > 2:4286453/1‑76 AACTTATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGC > 2:2717819/1‑76 AACTTATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGC > 2:3947423/1‑76 ACTTATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCG > 2:4599510/1‑76 aTATGGGCGTGGGCAGAAACCCCGACATGCTCAAGCAGTTTCGGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTT < 2:4960158/75‑1 TATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTT > 1:2244047/1‑76 TATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTT > 1:1504065/1‑76 TATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTT > 1:3508830/1‑76 ATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTA > 1:160934/1‑76 gGGCGTGAGCAGAAACCCCGCCACGCTCCAGCAGTTTCGGGGTTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAG < 1:1938431/75‑1 GCGTGAGCAGAAAGCCCGACCCGCTCCAGCAGTTTCAGGGTTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCA < 2:4484062/76‑1 GCGTGAGCAGAAACCCCGACCCGCTCCAGCAGTTTCAGGGTTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCA < 1:1199646/76‑1 CGTGAGCAGAAAGCCCGACACGCTCCAGCAGTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCAC > 2:2305094/1‑76 ggGAGAAGAAAGCCCGACACGCTCCAGCAGTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACT < 2:276757/74‑1 GTGAGCAGAAAGCCCGACACGCTCCAGCAGTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACT > 1:3815820/1‑76 gGAGCAGAAGGCCCGACACGCTCCAGCAGTTTCAGGGTTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTT < 1:995379/75‑1 TGAGCAGAAAGCCCGACACGCTCCAGCAGTTTCAGGGTTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTT < 1:976341/76‑1 GAGCAGAAAGCCCGACCCGCTCCAGCAGTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTT < 2:1295603/76‑1 GAGCAGAAAGCCCGACACGCTCCAGCAGTTTCAGGGTTTTTTCAGGAGCCGGCGCTTTATCGCGTTTAAGCACTTT < 2:2110619/76‑1 agaAGAAAGCCCGACACGCTCCAGCAGTTTCAGGGTTTTTCCAGGAGCCGGCGCTTTATCGCGTTTAAGCACTTTC < 2:2969467/73‑1 GCAAAAAGCCCGACACGCTCCAGCAGTTTCAGGTCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCA < 2:719560/76‑1 GCAAAAAGCCCGACACGCCCCAGCAGTTTCAGGGTTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCA < 1:4564008/76‑1 AGAAAGCCCGACACGCTCCAGCAGTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACC > 2:3766009/1‑76 AGAAAGCCCGACACGCTCCAGCAGTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACC > 2:931573/1‑76 AGAAAGCCCGACACGCTCCAGCAGTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACC > 1:1898064/1‑76 aAAACCCCGACACGCTCCAGCAGTTTCAGGGTTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCT < 1:2251004/75‑1 GAAAGCCCGACACGCTCCAGCAGTTTCAGGGTTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCT < 2:2325081/76‑1 GAAAGCCCGACACGCTCCAGCAGTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCT > 1:2533816/1‑76 ccCCCGGCCCGCTGCAGCAGTTTCAGGGCTTTGTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCG < 1:2510314/74‑1 CCGACCCGCTCCAGCAGTTTCAGGGTTTTTTCAGGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCA < 2:1042543/76‑1 CCGACACGCTCCAGCAGTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCA > 1:948579/1‑76 CCGACACGCTCCAGCAGTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCA > 1:2442817/1‑76 CCGACACGCCCCAGCATTTTCAGGGTTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCA < 2:805770/76‑1 CGACACGCTCCAGCAGTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAG > 2:3464796/1‑76 ccCGCCCCAGCAGTTTCAGTGTTTTTCCGCGAGCCGGCGCTTTATCGCCTTTAAGCACTTTCACCTGCGCCAGGGT < 1:4493067/74‑1 ccCGCCCCAGCAGTTTCAGGGTTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGT < 1:5105917/74‑1 ACGCTCCAGCAGTTTCAGGGTTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTC < 2:4607451/76‑1 CTCCAGCAGTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAGG > 2:1710302/1‑76 CCAGCAGTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAGGTT > 2:4670689/1‑76 CAGCAGTTTCGGGTTTTTTTCAGGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAGGTTT < 2:3096514/76‑1 CAGCAGTTTCGGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAGGTTT < 1:3210028/76‑1 AGCGGTTTCGGGGCTTTTTCTGGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAGGTTTT < 2:4258391/76‑1 AGCAGTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAGGTTTT > 2:3899330/1‑76 catTTTCAGGGCTTTTTCAGGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAGGTTTTCG < 2:2144545/73‑1 CAGTTTCAGGGTTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAGGTTTTCG < 1:5002459/76‑1 CAGTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAGGTTTTCG > 1:1777247/1‑76 GTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAGGTTTTCGAT > 1:1393548/1‑76 TTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAGGTTTTCGATA > 1:893817/1‑76 TTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAGGTTTTCGATA > 2:4988245/1‑76 TTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAGGTTTTCGATA > 1:1172742/1‑76 TTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAGGTTTTCGATAA > 2:3950162/1‑76 TCAGTGTTTTTGCGCGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAGGTTTTCGATAAT < 1:657688/76‑1 TCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAGGTTTTCGATAAT > 1:3361820/1‑76 ACGCTGCTGCTGACCGCCGGAAAGCTGCGCCGGAAACTTATTGGCGTGAGCAGAAAGCCCGACACGCTCCAGCAGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/664610‑664687‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tttCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAGGTTTTCGATAAT > REL606/666134‑666208 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |