| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 4347640 = | 27 (1.250) | 22 (1.080) | 20/142 | 0.2 | 43.3% | coding (256/477 nt) | fxsA | inner membrane protein |
| ? | REL606 | = 4356083 | 32 (1.570) | coding (351/537 nt) | blc | outer membrane lipoprotein (lipocalin) | |||||
TCACTGTCAGATGCTTTTGCACCGGCGGTAATAAAAGCAGAAGACCGAGGAAGTCGGTGAAAAAGCCCGGTAATAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/4347715‑4347640‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ataaCGTCATTGCACTTGATCGGGAATACCGCCATGCGCTGGTTTGCGGCCCGGACCGCGACTACCTGTGGATACTCT < REL606/4356083‑4356010 TCACTGTCAGATGCTTTTGCACCGGCGGTAATAAAAGCAGAAGACCGAGGAAGTCGGTGAAAAAGCCCGGTAATAA < 2:490138/76‑1TCAATGTCAGATGCTTTTGCACCGGCGGTAATAAAAGCAGAAGACCGAGGAAGTCGGTGAAAAAGCCCGGTAATAA > 2:499704/1‑76 CTGTCAGATGCTTTTGCACCGGCGGTAATAAAAGCAGAAGACCGAGGAAGTCGGTGAAAAAGCCCGGTAATAACGT < 1:204690/76‑1 CAGATGCTTTTGCACCGGCGGTAATAAAAGCAGAAGACCGAGGAAGTCGGTGAAAAAGCCCGGTAATAACGTCATT > 2:104733/1‑76 CTTTTGCACCGGCGGTAATAAAAGCAGAAGACCGAGGAAGTCGGTGAAAAAGCCCGGTAATAACGTCATTGCACTT < 2:508929/76‑1 GCACCGGCGGTAATAAAAGCAGAAGACCGAGGAAGTCGGTGAAAAAGCCCGGTAATAACGTCATTGCACTTGATCG < 1:164553/76‑1 CGGCGGTAATAAAAGCAGAAGACCGAGGAAGTCGGTGAAAAAGCCCGGTAATAACGTCATTGCACTTGATCGGGAA > 1:595958/1‑76 GGCGGTAATAAAAGCAGAAGACCGAGGAAGTCGGTGAAAAAGCCCGGTAATAACGTCATTGCACTTGATCGGGAAT < 1:261865/76‑1 AATAAAAGCAGAAGACCGAGGAAGTCGGTGAAAAAGCCCGGTAATAACGTCATTGCACTTGATCGGGAATACCGCC < 1:614746/76‑1 ATAAAAGCAGAAGACCGAGGAAGTCGGTGAAAAAGCCCGGTAATAACGTCATTGCACTTGATCGGGAATACCGCCA < 2:98472/76‑1 ATAAAAGCAGAAGACCGAGGAAGTCGGTGAAAAAGCCCGGTAATAACGTCATTGCACTTGATCGGGAATACCGCCA < 1:274810/76‑1 ATAAAAGCAGAAGACCGAGGAAGTCGGTGAAAAAGCCCGGTAATAACGTCATTGCACTTGATCGGGAATAACGCCA > 2:73610/1‑76 GACCGAGGAAGTCGGTGAAAAAGCCCGGTAATAACGTCATTGCACTTGATCGGGAATACCGCCATGCGCTGGTTTG < 2:488535/76‑1 CGAGGAAGTCGGTGAAAAAGCCCGGTAATAACGTCATTGCACTTGATCGGGAATACCGCCATGCGCTGGTTTGCGG > 1:77257/1‑76 CGAGGAAGTCGGTGAAAAAGCCCGGTAATAACGTCATTGCACTTGATCGGGAATACCGCCATGCGCTGGTTTGCGG > 1:337845/1‑76 GAGGAAGTCGGTGAAAAAGCCCGGTAATAACGTCATTGCACTTGATCGGGAATACCGCCATGCGCTGGTTTGCGGC > 2:64130/1‑76 AGGAAGTCGGTGAAAAAGCCCGGTAATAACGTCATTGCACTTGATCGGGAATACCGCCATGCGCTGGTTTGCGGCC > 2:271279/1‑76 GAAGTCGGTGAAAAAGCCCGGTAATAACGTCATTGCACTTGATCGGGAATACCGCCATGCGCTGGTTTGCGGCCCG > 1:343928/1‑76 AAGTCGGTGAAAAAGCCCGGTAATAACGTCATTGCACTTGATCGGGAATACCGCCATGCGCTGGTTTGCGGCCCGG < 1:596340/76‑1 GTCGGTGAAAAAGCCCGGTAATAACGTCATTGCACTTGATCGGGAATACCGCCATGCGCTGGTTTGCGGCCCGGAC < 2:234123/76‑1 GTGAAAAAGCCCGGTAATAACGTCATTGCACTTGATCGGGAATACCGCCATGCGCTGGTTTGCGGCCCGGACCGCG > 2:131692/1‑76 TGAAAAAGCCCGGTAATAACGTCATTGCACTTGATCGGGAATACCGCCATGCGCTGGTTTGCGGCCCGGACCGCGA > 2:435662/1‑76 AAAAAGCCCGGTAATAACGTCATTGCACTTGATCGGGAATACCGCCATGCGCTGGTTTGCGGCCCGGACCGCGACT < 1:403870/76‑1 AAAGCCCGGTAATAACGTCATTGCACTTGATCGGGAATACCGCCATGCGCTGGTTTGCGGCCCGGACCGCGACTAC > 2:240069/1‑76 AACGTCATTGCACTTGATCGGGAATACCGCCATGCGCTGGTTTGCGGCCCGGACCGCGACTACCTGTGGATACTCT > 2:153065/1‑76 AACGTCATTGCACTTGATCGGGAATACCGCCATGCGCTGGTTTGCGGCCCGGACCGCGACTACCTGTGGATACTCT > 1:290705/1‑76 TCACTGTCAGATGCTTTTGCACCGGCGGTAATAAAAGCAGAAGACCGAGGAAGTCGGTGAAAAAGCCCGGTAATAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/4347715‑4347640‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ataaCGTCATTGCACTTGATCGGGAATACCGCCATGCGCTGGTTTGCGGCCCGGACCGCGACTACCTGTGGATACTCT < REL606/4356083‑4356010 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |