| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 4347640 = | 27 (1.250) | 22 (1.080) | 20/142 | 0.2 | 43.3% | coding (256/477 nt) | fxsA | inner membrane protein |
| ? | REL606 | = 4356083 | 32 (1.570) | coding (351/537 nt) | blc | outer membrane lipoprotein (lipocalin) | |||||
AGAGTATCCACAGGTAGTCGCGGTCCGGGCCGCAAACCAGCGCATGGCGGTATTCCCGATCAAGTGCAATGACGTTATAACCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGCAGCGCGAGTTGGTGCGCCGGTAAAGTACG > REL606/4356010‑4356156 | agagTATCCACAGGTAGTCGCGGTCCGGGCCGCAAACCAGCGCATGGCGGTATTCCCGATCAAGTGCAATGACGtt > 2:153065‑M2/1‑74 (MQ=255)agagTATCCACAGGTAGTCGCGGTCCGGGCCGCAAACCAGCGCATGGCGGTATTCCCGATCAAGTGCAATGACGtt > 1:290705‑M2/1‑74 (MQ=255) ccACAGGTAGTCGCGGTCCGGGCCGCAAACCAGAGCATGGCGGTATTCCCGATCAAGTGCAATGACGTTATAACCg > 1:404687/1‑76 (MQ=255) acaGGTAGTCGCGGTCCGGGCCGCAAACCAGCGCATGGCGGTATTCCCGATCAAGTGCAATGACGTTATAACCGcc < 1:113975/76‑1 (MQ=255) caGGTAGTCGCGGTCCGGGCCGCAAACCAGCGCATGGCGGTATTCCCGATCAAGTGCAATGACGTTATAACCGCCa > 2:157750/1‑76 (MQ=255) caGGTAGTCGCGGTCCGGGCCGCAAACCAGCGCATGGCGGTATTCCCGATCAAGTGCAATGACGTTATAACCGCCa > 2:199814/1‑76 (MQ=255) aGGTAGTCGCGGTCCGGGCCGCAAACCAGCGCATGGCGGTATTCCCGATCAAGTGCAATGACGTTATAACCGCCAt < 1:611912/76‑1 (MQ=255) ggTAGTCGCGGTCCGGGCCGCAAACCAGCGCATGGCGGTATTCCCGATCAAGTGCAATGACGTTATAACCGCCATa < 1:106960/76‑1 (MQ=255) gTAGTCGCGGTCCGGGCCGCAAACCAGCGCATGGCGGTATTCCCGATCAAGTGCAATGACGttattaccgggcttt > 2:240069‑M2/1‑61 (MQ=255) tAGTCGCGGTCCGGGCCGCAAACCAGCGCATGGCGGTATTCCCGATCAAGTGCAATGACGTTATAACCGCCATAGa > 2:275416/1‑76 (MQ=255) aGTCGCGGTCCGGGCCGCAAACCAGCGCATGGCGGTATTCCCGATCAAGTGCAATGACGttattaccgggcttttt < 1:403870‑M2/76‑18 (MQ=255) gTCGCGGTCCGGGCCGCAAACCAGCGCATGGCGGTATTCCCGATCAAGTGCAATGACGTTATAACCGCCATAGaaa > 1:141607/1‑76 (MQ=255) tCGCGGTCCGGGCCGCAAACCAGCGCATGGCGGTATTCCCGATCAAGTGCAATGACGttattaccgggctttttca > 2:435662‑M2/1‑57 (MQ=255) tCGCGGCCCGGGCCGAAAACCAGCGCATGGCGGTATTCCCGATCAAGTGCAATGACGTTATAACCGCCATAGAAAg < 1:384821/76‑1 (MQ=255) ccgcgGCCCGGGCCGCAACCCAGCGCATGGCGGTATCCCCGATCAAGTGCAATGACGTTATAACCGCCATAGAAAg < 2:580822/75‑1 (MQ=255) cgcgGTCCGGGCCGCAAACCAGCGCATGGCGGTATTCCCGATCAAGTGCAATGACGttattaccgggctttttcac > 2:131692‑M2/1‑56 (MQ=255) cgcgGTCCGGGCCGCAAACCAGCGCATGGCGGTATTCCCGATCAAGTGCAATGACGTTATAACCGCCATAGAAAgg < 1:243044/76‑1 (MQ=255) gTCCGGGCCGCAAACCAGCGCATGGCGGTATTCCCGATCAAGTGCAATGACGttattaccgggctttttcaccgac < 2:234123‑M2/76‑25 (MQ=255) tCCGGGCCGCAAACCAGCGCATGGCGGTATTCCCGATCAAGTGCAATGACGTTATAACCGCCATAGAAAGGACCaa > 2:580514/1‑76 (MQ=255) ccGGGCCGCAAACCAGCGCATGGCGGTATTCCCGATCAAGTGCAATGACGttattaccgggctttttcaccgactt < 1:596340‑M2/76‑27 (MQ=255) cGGGCCGCAAACCAGCGCATGGCGGTATTCCCGATCAAGTGCAATGACGttattaccgggctttttcaccgacttc > 1:343928‑M2/1‑49 (MQ=255) cGGGCCGCAAACCAGCGCATGGCGGTATTCCCGATCAAGTGCAATGACGTTATAACCGCCATAGAAAGGACCAAAg > 2:446891/1‑76 (MQ=255) ggCCGCAAACCAGCGCATGGCGGTATTCCCGATCAAGTGCAATGACGttattaccgggctttttcaccgacttcct > 2:271279‑M2/1‑47 (MQ=255) gCCGCAAACCAGCGCATGGCGGTATTCCCGATCAAGTGCAATGACGttattaccgggctttttcaccgacttcctc > 2:64130‑M2/1‑46 (MQ=255) ccGCAAACCAGCGCATGGCGGTATTCCCGATCAAGTGCAATGACGttattaccgggctttttcaccgacttcctcg > 1:77257‑M2/1‑45 (MQ=255) ccGCAAACCAGCGCATGGCGGTATTCCCGATCAAGTGCAATGACGttattaccgggctttttcaccgacttcctcg > 1:337845‑M2/1‑45 (MQ=255) cGCAACCCAGCGCAGGGCGGTATTCCCGATCAAGTGCAATGACGTTATAACCGCCATAGAAAGGACCAAAGAATGa < 1:435778/76‑1 (MQ=255) cAAACCAGCGCATGGCGGTATTCCCGATCAAGTGCAATGACGttattaccgggctttttcaccgacttcctcggtc < 2:488535‑M2/76‑35 (MQ=255) cAAACCAGCGCATGGCGGTATTCCCGATCAAGTGCAATGACGTTATAAACGCCATAGAAAGGACCAAAGAATGaca > 2:132879/1‑76 (MQ=255) aaaCCAGCGCATGGCGGTATTCCCGATCAAGTGCAATGACGTTATAACCGCCATAGAAAGGACCAAAGAATGacac > 2:131362/1‑76 (MQ=255) aCCAGCGCATGGCGGTATTCCCGATCAAGTGCAATGACGTTATAACCGCCATAGAAAGGACCAAAGAATGACACtt < 1:340743/76‑1 (MQ=255) cAGCGCATGGCGGTATTCCCGATCAAGTGCAATGACGTTATAACCGCCATAGAAAGGACCAAAGAATGACACTTTc < 1:388055/76‑1 (MQ=255) cAGCGCATGGCGGTATTCCCGATCAAGTGCAATGACGTTATAACCGCCATAGAAAGGACCAAAGAATGACACTTTc < 1:388054/76‑1 (MQ=255) cgcATGGCGGTATTCCCGATCAAGTGCAATGACGTTATAACCGCCATAGAAAGGACCAAAGAATGACACTTTcagc > 2:393750/1‑76 (MQ=255) tGGCGTTATTCCCGATCAAGTGCAATGACGttattaccgggctttttcaccgacttcctcggtcttctgcttttat > 2:73610‑M2/1‑30 (MQ=255) tGGCGGTATTCCCGATCAAGTGCAATGACGttattaccgggctttttcaccgacttcctcggtcttctgcttttat < 2:98472‑M2/76‑47 (MQ=255) tGGCGGTATTCCCGATCAAGTGCAATGACGttattaccgggctttttcaccgacttcctcggtcttctgcttttat < 1:274810‑M2/76‑47 (MQ=255) tGGCGGTATTCCCGATCAAGTGCAATGACGTTATAACCGCCATAGAAAGGACCAAAGAATGACACTTTcagcgcag > 2:31524/1‑76 (MQ=255) ggCGGTATTCCCGATCAAGTGCAATGACGttattaccgggctttttcaccgacttcctcggtcttctgcttttatt < 1:614746‑M2/76‑48 (MQ=255) tATTCCCGATCAAGTGCAATGACGTTATAACCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGCAGCGCGAg > 2:15274/1‑76 (MQ=255) aTTCCCGATCAAGTGCAATGACGttattaccgggctttttcaccgacttcctcggtcttctgcttttattaccgcc < 1:261865‑M2/76‑54 (MQ=255) aTTCCCGATCAAGTGCAATGACGTTATAACCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGCAGCGCGAGt > 1:131578/1‑76 (MQ=255) ttCCCGATCAAGTGCAATGACGttattaccgggctttttcaccgacttcctcggtcttctgcttttattaccgccg > 1:595958‑M2/1‑22 (MQ=255) ttCCCGATCAAGTGCAATGACGTTATAACCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGCAGCGTGAGtt > 2:28804/1‑76 (MQ=255) cccGATCAAGTGCAATGACGTTATAACCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGCAGCGCGAGTTgg > 2:247008/1‑76 (MQ=255) cccGATCAAGTGCAATGACGTTATAACCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGCAGCGCGAGTTgg < 2:195756/76‑1 (MQ=255) cGATCAAGTGCAATGACGttattaccgggctttttcaccgacttcctcggtcttctgcttttattaccgccggtgc < 1:164553‑M2/76‑59 (MQ=255) tCAAGTGCAATGACGTTATAACCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGCAGCGCGAGTTGGTgcgc > 1:259218/1‑76 (MQ=255) aaGTGCAATGACGttattaccgggctttttcaccgacttcctcggtcttctgcttttattaccgccggtgcaaaag < 2:508929‑M2/76‑64 (MQ=255) gtacAATGACTTAATAACCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGCAGCGCGAGTTGGTGCGCCGGt < 1:121294/73‑1 (MQ=255) tGCAATGACGTTATAACCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGCAGCGCGAGTTGGTGCGCCGGTa > 1:529919/1‑76 (MQ=255) aaTGACGttattaccgggctttttcaccgacttcctcggtcttctgcttttattaccgccggtgcaaaagcatctg > 2:104733‑M2/1‑7 (MQ=255) aTGACGTTATAACCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGCAGCGCGAGTTGGTGCGCCGGTAAAGt < 1:591881/76‑1 (MQ=255) tGACGTTATAACCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGCAGCGCGAGTTGGTGCGCCGGTAAAGTa > 1:509132/1‑76 (MQ=255) aCGttattaccgggctttttcaccgacttcctcggtcttctgcttttattaccgccggtgcaaaagcatctgacag < 1:204690‑M2/76‑74 (MQ=255) aCGTTATAACCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGCAGCGCGAGTTGGTGCGCCGGTAAAGTACg > 2:203275/1‑76 (MQ=255) | AGAGTATCCACAGGTAGTCGCGGTCCGGGCCGCAAACCAGCGCATGGCGGTATTCCCGATCAAGTGCAATGACGTTATAACCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGCAGCGCGAGTTGGTGCGCCGGTAAAGTACG > REL606/4356010‑4356156 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |